Os01g0701300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os01g0701300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 167.39 | 0.608 | 2.92 | 0.302 | 0.172 | 0.564 | 0.0851 | 2.23 | -0.0126 | 9.73 | 79 | 1481 | -- | -- |
| 170.86 | 0.609 | 2.93 | 0.114 | 0.176 | 0.711 | 0.126 | -- | -0.0496 | 9.11 | 78 | 1612 | -- | -- |
| 167.33 | 0.602 | 2.92 | 0.3 | 0.17 | 0.584 | -- | 2.21 | -0.0134 | 9.18 | 78.3 | 1532 | -- | -- |
| 170.66 | 0.608 | 2.93 | 0.136 | 0.205 | 0.78 | -- | -- | -0.0557 | 7.8 | 78.13 | 1628 | -- | -- |
| 169.01 | 0.605 | 2.93 | 0.297 | -- | 0.609 | -- | 2.18 | -0.0144 | -- | 78.42 | 1532 | -- | -- |
| 176.94 | 0.624 | 2.93 | 0.155 | 0.184 | -- | 0.149 | -- | -0.0204 | 9.49 | -- | -- | -- | -- |
| 177.02 | 0.623 | 2.93 | 0.161 | 0.184 | -- | -- | -- | -0.0202 | 9.45 | -- | -- | -- | -- |
| 172.66 | 0.612 | 2.94 | 0.131 | -- | 0.744 | -- | -- | -0.0484 | -- | 78.36 | 1542 | -- | -- |
| 171.12 | 0.609 | 2.94 | -- | 0.206 | 0.786 | -- | -- | -0.0647 | 7.65 | 78 | 1628 | -- | -- |
| 179.01 | 0.625 | 2.93 | 0.16 | -- | -- | -- | -- | -0.0197 | -- | -- | -- | -- | -- |
| 177.7 | 0.624 | 2.93 | -- | 0.184 | -- | -- | -- | -0.0382 | 9.39 | -- | -- | -- | -- |
| 173.11 | 0.613 | 2.94 | -- | -- | 0.755 | -- | -- | -0.0634 | -- | 78.7 | 1542 | -- | -- |
| 179.68 | 0.626 | 2.94 | -- | -- | -- | -- | -- | -0.0374 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 161.31 | temperature | 20 | 90 | < th | dose independent | rect. | 8 | 1 |
| 3 | 162.91 | humidity | 80 | 270 | < th | dose dependent | rect. | 6 | 1 |
| 4 | 163.37 | humidity | 80 | 270 | < th | dose independent | rect. | 6 | 1 |
| 5 | 163.94 | humidity | 80 | 720 | > th | dose independent | rect. | 20 | 12 |
| 10 | 164.42 | humidity | 80 | 720 | > th | dose independent | sin | 10 | NA |
| 16 | 164.64 | radiation | 1 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 20 | 164.73 | humidity | 80 | 720 | < th | dose independent | rect. | 19 | 13 |
| 21 | 164.78 | humidity | 80 | 720 | < th | dose independent | sin | 10 | NA |
| 39 | 165.14 | humidity | 80 | 1440 | < th | dose dependent | rect. | 20 | 12 |
| 56 | 165.41 | humidity | 80 | 1440 | < th | dose independent | rect. | 24 | 8 |
| 84 | 165.69 | radiation | 1 | 90 | > th | dose independent | rect. | 4 | 1 |
| 94 | 165.69 | radiation | 1 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 104 | 165.71 | humidity | 80 | 1440 | < th | dose dependent | rect. | 24 | 8 |
| 116 | 165.83 | humidity | 80 | 1440 | < th | dose independent | rect. | 3 | 5 |
| 119 | 165.85 | humidity | 80 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 295 | 166.97 | humidity | 80 | 1440 | < th | dose dependent | sin | 11 | NA |
| 304 | 167.01 | atmosphere | 1015 | 30 | < th | dose independent | rect. | 13 | 23 |
| 381 | 167.35 | humidity | 80 | 1440 | > th | dose independent | rect. | 23 | 3 |
| 412 | 167.44 | wind | 1 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 483 | 167.66 | humidity | 80 | 720 | < th | dose independent | rect. | 22 | 4 |
| 489 | 167.67 | temperature | 20 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 558 | 167.86 | humidity | 80 | 720 | < th | dose dependent | rect. | 22 | 4 |
| 608 | 167.95 | humidity | 70 | 720 | > th | dose dependent | rect. | 19 | 13 |
| 628 | 168.03 | humidity | 80 | 1440 | < th | dose independent | no | NA | NA |
| 638 | 168.03 | humidity | 80 | 1440 | < th | dose independent | rect. | 20 | 23 |
| 639 | 168.03 | humidity | 50 | 720 | > th | dose dependent | rect. | 20 | 9 |
| 680 | 168.13 | humidity | 80 | 1440 | < th | dose independent | rect. | 22 | 23 |
| 682 | 168.14 | humidity | 70 | 720 | > th | dose dependent | sin | 11 | NA |
| 688 | 168.15 | temperature | 20 | 720 | < th | dose dependent | rect. | 23 | 1 |
| 695 | 168.16 | humidity | 80 | 1440 | > th | dose independent | rect. | 20 | 23 |
| 696 | 168.16 | humidity | 50 | 720 | > th | dose dependent | sin | 11 | NA |
| 755 | 168.26 | humidity | 80 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 764 | 168.27 | humidity | 80 | 1440 | < th | dose independent | rect. | 3 | 23 |
| 767 | 168.28 | humidity | 80 | 1440 | > th | dose independent | no | NA | NA |
| 791 | 168.32 | humidity | 90 | 720 | < th | dose dependent | rect. | 1 | 1 |
| 835 | 168.39 | humidity | 80 | 720 | < th | dose independent | rect. | 1 | 1 |
| 920 | 168.51 | humidity | 80 | 1440 | > th | dose independent | rect. | 4 | 23 |