Os01g0700900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0700900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Cytochrome P450 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 275.89 | 0.78 | 3.38 | -0.703 | 4.62 | -6.36 | -2.44 | 3.99 | 0.465 | 6.23 | 70.34 | 708 | 17.2 | 14.2 |
| 276.09 | 0.774 | 3.36 | -0.665 | 4.77 | -6.44 | 0.582 | -- | 0.486 | 6.29 | 71.14 | 700 | 17.4 | 14 |
| 278.54 | 0.777 | 3.37 | -0.711 | 4.07 | -6.07 | -- | 0.943 | 0.492 | 6.53 | 70 | 736 | 16.8 | 14.8 |
| 276.82 | 0.775 | 3.36 | -0.668 | 4.67 | -6.35 | -- | -- | 0.467 | 6.33 | 71.1 | 701 | 17.4 | 14 |
| 353.11 | 0.88 | 3.54 | -0.527 | -- | 0.216 | -- | 0.394 | 0.169 | -- | 69.99 | 4295 | 16.8 | 14.8 |
| 350.3 | 0.877 | 3.54 | -0.534 | 0.386 | -- | 0.287 | -- | 0.201 | 21.7 | -- | -- | -- | -- |
| 350.49 | 0.877 | 3.54 | -0.543 | 0.392 | -- | -- | -- | 0.202 | 21.2 | -- | -- | -- | -- |
| 314 | 0.825 | 3.63 | -1.97 | -- | 2.07 | -- | -- | -0.23 | -- | 77.34 | 47520 | 19.4 | 6.35 |
| 288.3 | 0.791 | 3.35 | -- | 4.62 | -6.26 | -- | -- | 0.52 | 6.41 | 71.62 | 694 | 17.5 | 14 |
| 359.38 | 0.886 | 3.53 | -0.541 | -- | -- | -- | -- | 0.2 | -- | -- | -- | -- | -- |
| 358.25 | 0.885 | 3.53 | -- | 0.392 | -- | -- | -- | 0.262 | 21.1 | -- | -- | -- | -- |
| 355.12 | 0.878 | 3.54 | -- | -- | 0.667 | -- | -- | 0.216 | -- | 76.8 | 47520 | 20.2 | 8.2 |
| 367.11 | 0.894 | 3.52 | -- | -- | -- | -- | -- | 0.26 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 276.88 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 14 |
| 3 | 280.36 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 6 |
| 5 | 280.73 | humidity | 70 | 720 | < th | dose independent | rect. | 17 | 15 |
| 7 | 281.29 | humidity | 70 | 720 | < th | dose independent | rect. | 17 | 3 |
| 60 | 286.29 | humidity | 70 | 720 | < th | dose independent | sin | 12 | NA |
| 62 | 286.82 | humidity | 70 | 720 | > th | dose independent | sin | 12 | NA |
| 63 | 286.84 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 3 |
| 68 | 287.22 | humidity | 80 | 720 | < th | dose dependent | rect. | 17 | 3 |
| 70 | 287.55 | humidity | 80 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 72 | 288.23 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 81 | 289.05 | wind | 5 | 43200 | > th | dose dependent | rect. | 8 | 11 |
| 82 | 289.06 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 6 |
| 89 | 289.25 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 8 |
| 91 | 289.28 | wind | 5 | 43200 | > th | dose dependent | rect. | 4 | 15 |
| 93 | 289.32 | wind | 5 | 43200 | > th | dose dependent | sin | 22 | NA |
| 99 | 289.43 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 19 |
| 117 | 289.63 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 19 |
| 119 | 289.69 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 8 |
| 126 | 289.78 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 20 |
| 127 | 289.79 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 11 |
| 128 | 289.79 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 15 |
| 168 | 290.09 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 4 |
| 172 | 290.13 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 195 | 290.26 | wind | 5 | 43200 | > th | dose independent | rect. | 2 | 18 |
| 197 | 290.27 | wind | 5 | 43200 | > th | dose independent | sin | 23 | NA |
| 199 | 290.29 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 3 |
| 215 | 290.36 | wind | 5 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 216 | 290.40 | wind | 5 | 43200 | < th | dose independent | rect. | 8 | 9 |
| 236 | 290.50 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 3 |
| 297 | 290.65 | wind | 5 | 43200 | < th | dose independent | rect. | 2 | 18 |
| 302 | 290.70 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 6 |
| 317 | 290.77 | wind | 5 | 43200 | < th | dose independent | sin | 23 | NA |
| 342 | 290.87 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 14 |
| 344 | 290.87 | temperature | 30 | 1440 | > th | dose dependent | rect. | 14 | 5 |
| 361 | 290.90 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 10 |
| 415 | 291.08 | temperature | 30 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 432 | 291.13 | wind | 5 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 466 | 291.19 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 500 | 291.30 | wind | 7 | 43200 | < th | dose independent | rect. | 6 | 13 |
| 515 | 291.35 | wind | 7 | 43200 | < th | dose independent | rect. | 6 | 15 |
| 538 | 291.43 | temperature | 30 | 1440 | < th | dose independent | sin | 12 | NA |
| 542 | 291.44 | wind | 5 | 43200 | < th | dose independent | rect. | 8 | 14 |
| 580 | 291.56 | temperature | 30 | 1440 | > th | dose dependent | sin | 13 | NA |
| 708 | 291.85 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 937 | 292.46 | temperature | 30 | 1440 | > th | dose independent | sin | 12 | NA |
| 962 | 292.52 | wind | 5 | 43200 | > th | dose dependent | no | NA | NA |