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Os01g0700000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.8 (0.0238) R2 : 0.885
β1 : 1.02 (0.0872) R2dD : 0.0356 R2D : 0.0246
β2 : 3.6 (0.0622) R2dC : 0.845 R2C : 0.848
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.242 (0.0509) R2dN8 : 0.0076 R2N8 : -0.000141
σ : 0.448
deviance : 91.52
__
_____
C
peak time of C : 6.16
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
68.83 0.39 11.7 1.1 2.43 1.63 1.95 -1.6 0.403 6.86 17.88 586 -- --
70.76 0.392 11.8 0.983 2.3 1.7 1.2 -- 0.341 7.14 9.999 585 -- --
74.55 0.402 11.7 1.07 2.39 1.66 -- -0.0882 0.381 6.92 15.07 585 -- --
74.47 0.402 11.7 1.08 2.31 1.75 -- -- 0.376 7.01 13.87 585 -- --
90.52 0.443 11.8 1.28 -- 4.55 -- 1.02 0.434 -- 2.852 757 -- --
88.7 0.442 11.8 1.01 3.59 -- 1.08 -- 0.246 6.18 -- -- -- --
91.52 0.448 11.8 1.02 3.6 -- -- -- 0.242 6.16 -- -- -- --
91.74 0.446 11.8 1.3 -- 4.6 -- -- 0.439 -- 3.186 756 -- --
102.1 0.471 11.8 -- 2.1 2.01 -- -- 0.253 7.14 9.999 596 -- --
762.38 1.29 11.8 1.12 -- -- -- -- 0.321 -- -- -- -- --
118.93 0.51 11.8 -- 3.61 -- -- -- 0.128 6.14 -- -- -- --
134.41 0.54 11.8 -- -- 4.55 -- -- 0.317 -- 5.192 746 -- --
795.49 1.32 11.8 -- -- -- -- -- 0.197 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 57.78 radiation 1.0 270 > th dose dependent sin 14 NA
2 57.86 radiation 1.0 270 > th dose dependent rect. 13 19
3 58.37 radiation 40.0 270 < th dose dependent sin 14 NA
6 58.74 radiation 1.0 270 > th dose dependent rect. 14 2
9 58.88 wind 9.0 90 < th dose independent rect. 14 5
12 59.14 radiation 20.0 270 > th dose independent rect. 13 19
15 59.33 radiation 20.0 270 > th dose independent rect. 14 2
16 59.44 radiation 20.0 270 > th dose independent sin 14 NA
23 59.80 radiation 20.0 270 < th dose independent sin 14 NA
24 59.80 temperature 20.0 90 > th dose independent rect. 14 5
28 59.87 wind 1.0 90 > th dose independent rect. 14 5
29 59.87 temperature 10.0 90 > th dose independent rect. 14 5
31 59.87 atmosphere 1010.0 90 < th dose independent rect. 14 5
33 59.87 temperature 10.0 90 > th dose independent rect. 19 19
34 59.87 atmosphere 995.0 90 > th dose independent rect. 19 19
41 60.00 radiation 1.0 270 > th dose independent rect. 13 4
75 60.41 wind 9.0 90 < th dose independent rect. 19 19
77 60.44 precipitation 0.1 90 < th dose independent rect. 19 19
78 60.44 precipitation 0.1 90 < th dose dependent rect. 19 19
79 60.45 radiation 40.0 30 < th dose independent rect. 14 5
93 60.48 precipitation 0.1 30 < th dose independent rect. 14 5
94 60.48 precipitation 0.1 30 < th dose dependent rect. 14 5
117 60.69 temperature 10.0 1440 > th dose independent rect. 15 5
121 60.69 temperature 10.0 1440 > th dose independent rect. 20 19
144 60.80 wind 9.0 270 < th dose independent rect. 14 2
150 60.89 atmosphere 995.0 270 > th dose independent rect. 17 20
176 61.01 temperature 10.0 270 > th dose independent rect. 17 20
177 61.02 humidity 90.0 270 < th dose independent rect. 13 4
200 61.09 temperature 10.0 90 > th dose dependent rect. 14 5
206 61.16 temperature 20.0 270 > th dose independent rect. 14 2
216 61.33 atmosphere 995.0 30 > th dose dependent rect. 14 5
218 61.42 atmosphere 995.0 90 > th dose independent rect. 14 5
219 61.42 wind 9.0 270 < th dose independent rect. 3 14
220 61.43 humidity 50.0 270 > th dose independent rect. 14 2
227 61.56 humidity 90.0 270 < th dose independent rect. 14 2
230 61.59 precipitation 0.1 270 < th dose independent rect. 14 2
232 61.59 precipitation 0.1 270 < th dose dependent rect. 14 2
234 61.62 wind 1.0 270 > th dose independent rect. 14 2
235 61.62 temperature 10.0 270 > th dose independent rect. 14 2
237 61.62 atmosphere 1010.0 270 < th dose independent rect. 14 2
239 61.62 temperature 10.0 270 > th dose independent rect. 16 22
247 61.77 temperature 10.0 270 > th dose dependent rect. 14 2
274 61.93 humidity 50.0 30 > th dose independent rect. 14 5
305 62.12 precipitation 0.1 270 < th dose independent rect. 17 20
306 62.12 precipitation 0.1 270 < th dose dependent rect. 17 20
323 62.18 wind 9.0 270 < th dose independent rect. 17 20
375 62.51 wind 1.0 270 > th dose independent rect. 17 20
443 62.96 humidity 50.0 270 > th dose independent rect. 17 19
447 63.04 atmosphere 995.0 270 > th dose independent rect. 14 2
452 63.12 radiation 20.0 270 < th dose dependent rect. 16 11
453 63.13 humidity 70.0 270 < th dose independent rect. 14 2
470 63.22 wind 1.0 90 > th dose dependent rect. 14 5
472 63.26 radiation 10.0 270 < th dose independent rect. 16 11
488 63.46 temperature 10.0 270 > th dose independent rect. 17 10
492 63.46 temperature 10.0 270 > th dose independent rect. 3 14
493 63.46 atmosphere 1015.0 270 < th dose independent rect. 3 14
496 63.51 precipitation 0.1 270 < th dose independent rect. 16 22
497 63.51 precipitation 0.1 270 < th dose dependent rect. 16 22
503 63.59 wind 1.0 90 > th dose independent rect. 19 19
517 63.70 wind 9.0 270 < th dose independent rect. 11 22
534 63.74 atmosphere 995.0 270 > th dose independent rect. 17 10
541 63.82 humidity 50.0 270 > th dose independent rect. 17 10
543 63.83 radiation 40.0 270 < th dose dependent rect. 17 10
554 63.92 temperature 30.0 90 < th dose independent rect. 19 18
557 63.94 humidity 50.0 90 > th dose independent rect. 19 19
565 63.96 atmosphere 995.0 270 > th dose dependent rect. 14 2
572 64.02 precipitation 0.1 270 < th dose independent rect. 3 14
573 64.02 precipitation 0.1 270 < th dose dependent rect. 3 14
588 64.21 wind 7.0 270 < th dose independent rect. 12 20
597 64.30 wind 1.0 10 > th dose dependent rect. 14 5
598 64.31 radiation 40.0 270 < th dose independent rect. 17 20
602 64.32 wind 9.0 270 < th dose independent rect. 17 10
604 64.32 radiation 40.0 90 < th dose independent rect. 19 19
612 64.38 atmosphere 1015.0 90 < th dose independent rect. 19 19
614 64.42 precipitation 0.1 270 < th dose independent rect. 22 10
615 64.42 precipitation 0.1 270 < th dose dependent rect. 22 10
622 64.49 wind 7.0 270 < th dose independent rect. 22 10
658 64.72 temperature 10.0 270 > th dose independent rect. 22 10
659 64.72 temperature 30.0 270 < th dose independent rect. 22 10
660 64.72 humidity 50.0 270 > th dose independent rect. 22 10
662 64.72 atmosphere 995.0 270 > th dose independent rect. 22 10
663 64.72 temperature 10.0 270 > th dose independent rect. 8 14
681 64.79 radiation 40.0 270 < th dose independent rect. 22 10
713 65.02 radiation 40.0 270 < th dose independent rect. 14 2
721 65.09 wind 1.0 270 > th dose independent rect. 17 10
743 65.14 radiation 30.0 270 < th dose dependent rect. 8 17
750 65.17 temperature 10.0 90 > th dose dependent rect. 14 19
758 65.19 wind 9.0 30 < th dose dependent rect. 14 5
776 65.27 radiation 40.0 10 < th dose dependent rect. 14 5
783 65.31 wind 1.0 270 > th dose dependent rect. 14 2
793 65.39 atmosphere 1000.0 270 > th dose independent rect. 9 2
810 65.45 temperature 20.0 270 > th dose independent rect. 9 2
811 65.45 temperature 10.0 270 > th dose dependent rect. 12 20
831 65.53 temperature 30.0 270 < th dose independent rect. 17 19
835 65.55 precipitation 0.1 270 < th dose independent rect. 12 20
836 65.55 precipitation 0.1 270 < th dose dependent rect. 12 20
839 65.58 precipitation 0.1 270 < th dose independent rect. 13 18
841 65.58 precipitation 0.1 270 < th dose dependent rect. 13 18
857 65.63 precipitation 0.1 270 < th dose independent rect. 17 10
858 65.63 precipitation 0.1 270 < th dose dependent rect. 17 10
861 65.67 temperature 10.0 270 > th dose independent rect. 9 2
863 65.67 atmosphere 1015.0 270 < th dose independent rect. 9 2
864 65.67 precipitation 0.1 270 < th dose independent rect. 9 2
865 65.67 temperature 10.0 270 > th dose independent rect. 11 22
866 65.67 precipitation 0.1 270 < th dose dependent rect. 9 2
868 65.68 atmosphere 1000.0 270 > th dose independent rect. 8 4
873 65.69 wind 1.0 270 > th dose independent rect. 9 2
886 65.76 wind 9.0 270 < th dose independent rect. 9 2
890 65.78 radiation 1.0 270 > th dose independent rect. 9 2
905 65.85 temperature 20.0 270 > th dose independent rect. 8 4
928 65.92 temperature 10.0 10 > th dose dependent rect. 14 20
936 65.94 radiation 1.0 90 > th dose independent rect. 9 5
940 65.96 precipitation 0.1 270 < th dose independent rect. 11 22
943 65.96 precipitation 0.1 270 < th dose dependent rect. 11 22
944 65.97 precipitation 0.1 270 < th dose independent rect. 8 4
945 65.97 wind 1.0 270 > th dose independent rect. 7 5
947 65.97 precipitation 0.1 270 < th dose dependent rect. 8 4
948 65.98 temperature 10.0 270 > th dose independent rect. 8 4
950 65.98 atmosphere 1015.0 270 < th dose independent rect. 8 4
952 65.98 temperature 10.0 270 > th dose independent rect. 12 20
966 66.02 temperature 10.0 270 > th dose independent rect. 7 6
967 66.02 atmosphere 995.0 270 > th dose independent rect. 7 6
968 66.02 atmosphere 1015.0 270 < th dose independent rect. 7 6
970 66.02 temperature 10.0 270 > th dose independent rect. 13 18
985 66.06 precipitation 0.1 270 < th dose independent rect. 7 6
987 66.06 radiation 10.0 270 < th dose independent rect. 8 17
990 66.06 precipitation 0.1 270 < th dose dependent rect. 7 6