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Os01g0699100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.1 (0.0453) R2 : 0.812
β1 : -1.94 (0.165) R2dD : 0.0587 R2D : 0.0392
β2 : 6.13 (0.145) R2dC : 1.25 R2C : 0.0303
β3 : -4.84 (0.152) R2dE : 0.71 R2E : -0.502
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.733 (0.0963) R2dN8 : 0.0321 R2N8 : 0.00233
σ : 0.844
deviance : 328.05
__
_____
C
peak time of C : 9.17
E
wheather : wind
threshold : 9
memory length : 752
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 20
open length of G : 20.6

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
309.55 0.827 10.1 -2 6.01 -4.82 3.33 -1.77 -0.721 9.14 9.05 748 19.9 20.9
313.15 0.824 10.1 -2 6 -4.74 2.14 -- -0.741 9.13 9.008 752 19.9 20.8
325.98 0.841 10.1 -1.94 6.17 -4.85 -- 0.737 -0.725 9.17 9 753 19.9 20.6
328.05 0.844 10.1 -1.94 6.13 -4.84 -- -- -0.733 9.17 9 752 20 20.6
869.54 1.37 10.2 -1.9 -- -4.92 -- 0.754 -0.618 -- 9.383 1041 21.6 20.6
403.53 0.942 10.2 -2.02 4.82 -- 2.79 -- -0.823 6.28 -- -- -- --
422.64 0.963 10.2 -1.98 4.84 -- -- -- -0.833 6.24 -- -- -- --
420.25 0.955 10.3 -2.21 -- -4.37 -- -- -0.956 -- 47.03 630 4.72 16.9
419.77 0.954 10.1 -- 5.92 -5.15 -- -- -0.525 9 8.699 749 20 20.7
1636.26 1.89 10.3 -1.85 -- -- -- -- -0.727 -- -- -- -- --
526.44 1.07 10.1 -- 4.81 -- -- -- -0.612 6.26 -- -- -- --
520.84 1.06 10.2 -- -- -4.69 -- -- -0.643 -- 66.83 644 5.15 15.7
1726.8 1.94 10.2 -- -- -- -- -- -0.522 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 318.15 wind 9.0 720 < th dose independent rect. 20 21
2 319.03 temperature 10.0 90 > th dose dependent rect. 20 22
3 320.26 humidity 50.0 10 > th dose dependent rect. 18 3
9 323.36 temperature 15.0 270 > th dose independent rect. 5 11
10 323.52 temperature 15.0 720 > th dose independent rect. 5 3
11 323.86 wind 9.0 720 < th dose independent rect. 13 19
12 324.16 radiation 20.0 270 < th dose independent rect. 16 13
15 324.82 radiation 30.0 720 < th dose dependent rect. 17 3
16 324.89 wind 9.0 270 < th dose independent rect. 5 11
17 324.90 wind 9.0 720 < th dose independent rect. 3 14
18 325.07 humidity 50.0 720 > th dose independent rect. 17 3
22 325.28 wind 9.0 270 < th dose independent rect. 12 13
25 325.57 precipitation 0.1 270 < th dose independent rect. 12 13
26 325.57 precipitation 0.1 270 < th dose dependent rect. 12 13
34 326.81 radiation 40.0 270 < th dose dependent rect. 16 13
36 327.28 temperature 10.0 270 > th dose dependent rect. 5 11
37 327.35 precipitation 0.1 270 < th dose independent rect. 1 11
38 327.35 precipitation 0.1 270 < th dose dependent rect. 1 11
39 327.36 radiation 10.0 270 < th dose independent rect. 16 3
47 327.91 radiation 30.0 720 < th dose independent rect. 5 3
50 328.01 temperature 10.0 720 > th dose independent rect. 8 5
51 328.01 atmosphere 995.0 720 > th dose independent rect. 8 5
52 328.01 atmosphere 1015.0 720 < th dose independent rect. 8 5
53 328.01 temperature 10.0 720 > th dose independent rect. 13 19
57 328.43 radiation 1.0 720 < th dose dependent rect. 20 5
58 328.44 temperature 10.0 720 > th dose independent rect. 20 5
59 328.44 temperature 30.0 720 < th dose independent rect. 20 5
60 328.44 humidity 50.0 720 > th dose independent rect. 20 5
63 328.44 atmosphere 995.0 720 > th dose independent rect. 20 5
64 328.44 radiation 1.0 720 < th dose independent rect. 20 5
69 328.44 temperature 10.0 720 > th dose independent rect. 1 19
74 328.55 temperature 10.0 720 > th dose independent rect. 17 3
75 328.55 atmosphere 1015.0 720 < th dose independent rect. 17 3
76 328.55 radiation 30.0 720 < th dose independent rect. 17 3
78 328.55 temperature 10.0 720 > th dose independent rect. 20 21
83 328.64 precipitation 0.1 720 < th dose independent rect. 8 5
84 328.64 precipitation 0.1 720 < th dose dependent rect. 8 5
85 328.72 precipitation 0.1 720 < th dose independent rect. 5 3
86 328.72 precipitation 0.1 720 < th dose dependent rect. 5 3
87 328.81 wind 9.0 720 < th dose independent rect. 20 5
89 328.91 wind 7.0 720 < th dose independent rect. 5 3
90 329.05 radiation 40.0 270 < th dose dependent rect. 20 12
93 329.12 temperature 30.0 720 < th dose independent rect. 5 3
94 329.12 humidity 50.0 720 > th dose independent rect. 5 3
96 329.12 atmosphere 995.0 720 > th dose independent rect. 5 3
97 329.12 atmosphere 1015.0 720 < th dose independent rect. 5 3
98 329.12 temperature 10.0 720 > th dose independent rect. 8 21
99 329.18 radiation 30.0 720 < th dose dependent rect. 17 10
101 329.42 radiation 30.0 270 < th dose independent rect. 20 12
105 329.81 atmosphere 1015.0 270 < th dose independent rect. 5 11
106 329.81 temperature 10.0 270 > th dose independent rect. 16 13
113 330.12 wind 9.0 270 < th dose independent rect. 20 12
115 330.20 humidity 70.0 90 > th dose independent rect. 18 2
117 330.25 wind 7.0 90 < th dose independent rect. 20 22
118 330.43 temperature 10.0 270 > th dose dependent rect. 20 12
120 330.60 temperature 10.0 270 > th dose independent rect. 8 12
121 330.60 temperature 10.0 270 > th dose independent rect. 20 12
122 330.60 temperature 30.0 270 < th dose independent rect. 20 12
123 330.60 humidity 50.0 270 > th dose independent rect. 20 12
125 330.60 atmosphere 995.0 270 > th dose independent rect. 20 12
126 330.60 atmosphere 1015.0 270 < th dose independent rect. 8 12
129 330.85 wind 9.0 720 < th dose independent rect. 11 6
134 330.95 wind 1.0 720 > th dose independent rect. 17 3
135 331.00 wind 9.0 720 < th dose independent rect. 5 19
136 331.24 humidity 60.0 10 > th dose independent rect. 18 3
144 331.58 wind 9.0 720 < th dose independent rect. 17 3
145 331.66 precipitation 0.1 270 < th dose independent rect. 5 11
146 331.66 precipitation 0.1 270 < th dose dependent rect. 5 11
148 331.88 humidity 50.0 720 > th dose independent rect. 17 10
152 332.07 temperature 10.0 270 > th dose independent rect. 1 11
153 332.07 atmosphere 995.0 270 > th dose independent rect. 1 11
154 332.07 atmosphere 1015.0 270 < th dose independent rect. 1 11
155 332.07 temperature 10.0 270 > th dose independent rect. 12 13
164 332.48 radiation 1.0 10 < th dose dependent rect. 18 3
170 332.74 temperature 15.0 270 > th dose dependent rect. 20 5
175 332.86 wind 9.0 90 < th dose dependent rect. 18 2
176 332.87 atmosphere 1015.0 720 < th dose independent rect. 3 14
180 332.93 precipitation 0.1 720 < th dose independent rect. 20 5
182 332.93 precipitation 0.1 720 < th dose dependent rect. 20 5
183 333.05 temperature 15.0 90 > th dose independent rect. 20 22
187 333.19 atmosphere 995.0 270 > th dose independent rect. 16 13
191 333.50 precipitation 0.1 720 < th dose independent rect. 20 21
192 333.50 precipitation 0.1 720 < th dose dependent rect. 20 21
196 333.60 radiation 1.0 30 < th dose dependent rect. 11 10
200 333.61 radiation 1.0 30 < th dose dependent rect. 13 8
216 334.19 radiation 1.0 720 > th dose independent rect. 8 5
219 334.27 precipitation 0.1 90 < th dose independent rect. 20 22
220 334.27 precipitation 0.1 90 < th dose dependent rect. 20 22
223 334.41 temperature 10.0 720 > th dose dependent rect. 5 3
233 334.49 wind 9.0 270 < th dose independent rect. 16 13
239 334.66 humidity 50.0 270 > th dose independent rect. 16 13
242 334.71 atmosphere 1000.0 90 > th dose independent rect. 18 2
248 334.86 wind 9.0 270 < th dose independent rect. 1 11
251 334.91 temperature 30.0 10 < th dose dependent rect. 18 3
255 335.03 atmosphere 995.0 720 > th dose independent rect. 17 3
270 335.45 temperature 15.0 270 > th dose dependent rect. 21 3
274 335.52 temperature 20.0 90 > th dose independent rect. 18 2
277 335.62 atmosphere 1015.0 720 < th dose independent rect. 1 19
282 335.78 wind 9.0 720 < th dose independent rect. 8 5
284 335.81 wind 5.0 90 < th dose independent rect. 18 2
286 335.96 radiation 10.0 90 < th dose dependent rect. 17 14
288 336.00 atmosphere 1015.0 90 < th dose independent rect. 20 22
306 336.22 atmosphere 1015.0 720 < th dose independent rect. 12 20
308 336.26 atmosphere 1015.0 720 < th dose independent rect. 20 21
319 336.39 temperature 10.0 90 > th dose independent rect. 18 2
322 336.39 atmosphere 1010.0 90 < th dose independent rect. 18 2
333 336.42 temperature 30.0 90 < th dose independent rect. 18 2
337 336.44 wind 9.0 90 < th dose independent rect. 18 2
352 336.72 temperature 10.0 720 > th dose independent rect. 17 10
353 336.72 radiation 30.0 720 < th dose independent rect. 17 10
355 336.72 temperature 10.0 720 > th dose independent rect. 3 14
360 336.80 wind 1.0 90 > th dose independent rect. 18 2
365 336.87 atmosphere 1015.0 720 < th dose independent rect. 20 12
396 337.19 radiation 10.0 720 < th dose independent rect. 17 10
431 337.56 wind 9.0 720 < th dose dependent rect. 5 3
439 337.66 atmosphere 995.0 90 > th dose dependent rect. 18 2
440 337.67 precipitation 0.1 720 < th dose independent rect. 12 5
441 337.67 precipitation 0.1 720 < th dose dependent rect. 12 5
443 337.70 temperature 15.0 720 > th dose independent rect. 12 5
463 337.97 wind 7.0 720 < th dose independent rect. 24 5
517 338.48 humidity 50.0 270 > th dose independent rect. 1 11
528 338.81 precipitation 0.1 720 < th dose independent rect. 20 12
531 338.81 precipitation 0.1 720 < th dose dependent rect. 20 12
534 338.85 atmosphere 1015.0 720 < th dose independent rect. 12 5
536 338.85 temperature 10.0 720 > th dose independent rect. 17 19
570 339.28 humidity 50.0 720 > th dose independent rect. 17 18
576 339.42 temperature 30.0 10 < th dose independent rect. 18 3
579 339.47 radiation 1.0 720 < th dose dependent rect. 24 5
592 339.59 wind 9.0 270 < th dose independent rect. 8 12
593 339.60 humidity 60.0 14400 > th dose independent rect. 20 1
597 339.62 radiation 1.0 720 < th dose dependent rect. 24 20
602 339.69 radiation 10.0 720 < th dose independent rect. 24 5
618 339.90 temperature 10.0 720 > th dose independent rect. 24 5
619 339.90 temperature 30.0 720 < th dose independent rect. 24 5
620 339.90 humidity 50.0 720 > th dose independent rect. 24 5
623 339.90 atmosphere 995.0 720 > th dose independent rect. 24 5
627 339.90 temperature 10.0 720 > th dose independent rect. 5 19
694 340.53 wind 9.0 720 < th dose independent rect. 17 10
777 341.40 atmosphere 995.0 270 > th dose independent rect. 5 11
787 341.51 precipitation 0.1 720 < th dose independent rect. 4 13
788 341.51 precipitation 0.1 720 < th dose dependent rect. 4 13
792 341.53 atmosphere 1015.0 720 < th dose independent rect. 20 4
798 341.59 precipitation 0.1 720 < th dose independent rect. 24 5
800 341.59 precipitation 0.1 720 < th dose dependent rect. 24 5
835 342.34 precipitation 0.1 90 < th dose independent rect. 18 2
837 342.34 precipitation 0.1 90 < th dose dependent rect. 18 2
926 342.84 temperature 10.0 1440 > th dose independent rect. 22 21
930 342.89 atmosphere 995.0 720 > th dose independent rect. 17 19
941 343.10 humidity 60.0 10 > th dose independent rect. 18 13
977 343.43 wind 9.0 720 < th dose independent rect. 13 10