Os01g0696500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0696500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 291.88 | 0.803 | 5.26 | -2.61 | 1.46 | 2.64 | -1.68 | -3.62 | -0.91 | 18 | 24.57 | 1131 | -- | -- |
| 294.97 | 0.8 | 5.13 | -1.71 | 1.24 | 2.38 | -1.91 | -- | -0.627 | 17.9 | 24.97 | 1010 | -- | -- |
| 298.6 | 0.805 | 5.25 | -2.59 | 1.45 | 2.62 | -- | -3.61 | -0.878 | 18.1 | 24.77 | 1140 | -- | -- |
| 302.81 | 0.81 | 5.14 | -1.71 | 1.43 | 2.25 | -- | -- | -0.633 | 18.1 | 25.05 | 1113 | -- | -- |
| 365.05 | 0.89 | 5.22 | -2.9 | -- | 3.03 | -- | -4.48 | -0.903 | -- | 25.3 | 2052 | -- | -- |
| 458.33 | 1 | 5.1 | -1.08 | 1.52 | -- | -1.32 | -- | -0.403 | 19.2 | -- | -- | -- | -- |
| 462.7 | 1.01 | 5.1 | -1.06 | 1.52 | -- | -- | -- | -0.407 | 19.4 | -- | -- | -- | -- |
| 375.78 | 0.903 | 5.12 | -1.84 | -- | 2.59 | -- | -- | -0.672 | -- | 25.3 | 2056 | -- | -- |
| 373.81 | 0.9 | 5.08 | -- | 1.4 | 1.89 | -- | -- | -0.365 | 18.3 | 25.56 | 1076 | -- | -- |
| 585.34 | 1.13 | 5.06 | -1.08 | -- | -- | -- | -- | -0.432 | -- | -- | -- | -- | -- |
| 492.11 | 1.04 | 5.07 | -- | 1.53 | -- | -- | -- | -0.29 | 19.3 | -- | -- | -- | -- |
| 458.21 | 0.997 | 5.05 | -- | -- | 2.19 | -- | -- | -0.359 | -- | 26.12 | 2058 | -- | -- |
| 616.18 | 1.16 | 5.04 | -- | -- | -- | -- | -- | -0.312 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 297.60 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 12 |
| 13 | 297.85 | temperature | 25 | 1440 | > th | dose dependent | rect. | 23 | 20 |
| 15 | 297.86 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 18 |
| 76 | 298.30 | temperature | 25 | 1440 | > th | dose dependent | sin | 23 | NA |
| 86 | 298.33 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 87 | 298.33 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 90 | 298.35 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 93 | 298.41 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 118 | 298.67 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 236 | 301.43 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 245 | 301.71 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 303 | 303.37 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 315 | 303.62 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 334 | 303.98 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 364 | 304.79 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 11 |
| 373 | 304.82 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 8 |
| 377 | 304.83 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 387 | 305.16 | wind | 7 | 43200 | > th | dose independent | rect. | 19 | 21 |
| 388 | 305.17 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 5 |
| 409 | 305.39 | wind | 3 | 43200 | > th | dose dependent | rect. | 3 | 12 |
| 417 | 305.57 | wind | 7 | 43200 | < th | dose independent | rect. | 19 | 21 |
| 435 | 306.09 | wind | 5 | 43200 | > th | dose dependent | rect. | 19 | 21 |
| 438 | 306.31 | humidity | 60 | 14400 | < th | dose dependent | rect. | 16 | 2 |
| 551 | 307.50 | wind | 5 | 43200 | > th | dose dependent | sin | 3 | NA |
| 566 | 307.66 | temperature | 30 | 14400 | < th | dose independent | sin | 14 | NA |
| 575 | 307.83 | temperature | 25 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 582 | 307.91 | temperature | 30 | 14400 | > th | dose independent | sin | 14 | NA |
| 627 | 308.29 | wind | 5 | 43200 | > th | dose independent | rect. | 3 | 13 |
| 644 | 308.41 | temperature | 25 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 656 | 308.53 | wind | 5 | 43200 | < th | dose independent | rect. | 3 | 13 |
| 678 | 308.62 | temperature | 25 | 14400 | > th | dose dependent | rect. | 15 | 14 |
| 711 | 308.79 | wind | 7 | 43200 | > th | dose independent | sin | 4 | NA |
| 714 | 308.86 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 726 | 308.92 | wind | 7 | 43200 | > th | dose independent | rect. | 23 | 17 |
| 732 | 308.96 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 738 | 308.98 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 6 |
| 753 | 309.07 | temperature | 25 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 763 | 309.11 | wind | 7 | 43200 | < th | dose independent | rect. | 23 | 17 |
| 789 | 309.25 | wind | 7 | 43200 | < th | dose independent | sin | 4 | NA |
| 808 | 309.37 | humidity | 60 | 14400 | < th | dose dependent | rect. | 16 | 16 |
| 810 | 309.39 | temperature | 25 | 14400 | > th | dose dependent | sin | 15 | NA |
| 847 | 309.62 | humidity | 60 | 14400 | < th | dose dependent | rect. | 16 | 6 |
| 897 | 309.89 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 10 |
| 919 | 309.97 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 14 |
| 922 | 309.98 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 19 |
| 925 | 310.00 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 11 |