Os01g0696000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Calcium-activated outward-rectifying potassium channel 1 (AtKCO1).
FiT-DB / Search/ Help/ Sample detail
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Os01g0696000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Calcium-activated outward-rectifying potassium channel 1 (AtKCO1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.2 | 0.254 | 9.06 | -0.543 | 0.253 | -1.11 | -0.259 | -0.517 | -0.0336 | 2.54 | 19.7 | 1281 | -- | -- |
| 29.31 | 0.252 | 9.07 | -0.563 | 0.251 | -0.923 | -0.216 | -- | -0.0391 | 2.43 | 19.98 | 1243 | -- | -- |
| 29.38 | 0.252 | 9.06 | -0.548 | 0.255 | -1.02 | -- | -0.255 | -0.0343 | 2.97 | 19.8 | 1226 | -- | -- |
| 29.41 | 0.253 | 9.06 | -0.556 | 0.248 | -0.899 | -- | -- | -0.0375 | 3.08 | 20.06 | 1180 | -- | -- |
| 32.77 | 0.267 | 9.06 | -0.544 | -- | -1.02 | -- | -0.191 | -0.0251 | -- | 19.88 | 1027 | -- | -- |
| 34.42 | 0.275 | 9.05 | -0.368 | 0.286 | -- | -0.276 | -- | 0.0402 | 2.61 | -- | -- | -- | -- |
| 34.67 | 0.276 | 9.05 | -0.361 | 0.287 | -- | -- | -- | 0.0416 | 2.87 | -- | -- | -- | -- |
| 32.8 | 0.267 | 9.06 | -0.558 | -- | -0.957 | -- | -- | -0.0359 | -- | 20.05 | 1032 | -- | -- |
| 36.04 | 0.28 | 9.04 | -- | 0.253 | -0.555 | -- | -- | 0.0576 | 3.1 | 18.85 | 838 | -- | -- |
| 39.43 | 0.293 | 9.05 | -0.349 | -- | -- | -- | -- | 0.049 | -- | -- | -- | -- | -- |
| 38.11 | 0.289 | 9.04 | -- | 0.28 | -- | -- | -- | 0.0818 | 2.86 | -- | -- | -- | -- |
| 39.66 | 0.293 | 9.04 | -- | -- | -0.643 | -- | -- | 0.0583 | -- | 19.03 | 899 | -- | -- |
| 42.65 | 0.305 | 9.04 | -- | -- | -- | -- | -- | 0.0877 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.83 | humidity | 50 | 14400 | > th | dose dependent | rect. | 24 | 4 |
| 60 | 28.36 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 61 | 28.38 | temperature | 20 | 1440 | < th | dose dependent | rect. | 2 | 3 |
| 119 | 28.60 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 11 |
| 126 | 28.63 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 10 |
| 132 | 28.66 | wind | 9 | 43200 | > th | dose dependent | rect. | 13 | 18 |
| 134 | 28.67 | wind | 9 | 43200 | > th | dose dependent | rect. | 11 | 20 |
| 135 | 28.68 | wind | 9 | 43200 | > th | dose independent | sin | 20 | NA |
| 150 | 28.72 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 14 |
| 154 | 28.73 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 12 |
| 166 | 28.75 | wind | 9 | 43200 | > th | dose dependent | rect. | 13 | 14 |
| 167 | 28.76 | wind | 9 | 43200 | > th | dose independent | rect. | 13 | 18 |
| 172 | 28.77 | radiation | 40 | 43200 | > th | dose dependent | rect. | 11 | 3 |
| 174 | 28.77 | wind | 9 | 43200 | > th | dose dependent | rect. | 13 | 11 |
| 178 | 28.78 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 195 | 28.81 | wind | 7 | 43200 | > th | dose dependent | rect. | 15 | 4 |
| 221 | 28.83 | wind | 9 | 43200 | > th | dose independent | rect. | 11 | 21 |
| 243 | 28.84 | wind | 9 | 43200 | < th | dose independent | rect. | 9 | 10 |
| 244 | 28.84 | wind | 9 | 43200 | > th | dose independent | rect. | 13 | 14 |
| 274 | 28.85 | radiation | 40 | 43200 | > th | dose dependent | sin | 21 | NA |
| 278 | 28.85 | wind | 7 | 43200 | > th | dose dependent | rect. | 15 | 2 |
| 304 | 28.86 | radiation | 40 | 43200 | > th | dose dependent | sin | 19 | NA |
| 309 | 28.86 | radiation | 40 | 43200 | > th | dose dependent | no | NA | NA |
| 317 | 28.86 | temperature | 30 | 90 | < th | dose dependent | rect. | 10 | 7 |
| 473 | 28.87 | wind | 9 | 43200 | < th | dose independent | sin | 20 | NA |
| 474 | 28.87 | wind | 9 | 43200 | > th | dose independent | rect. | 13 | 11 |
| 489 | 28.88 | radiation | 40 | 43200 | > th | dose dependent | rect. | 13 | 23 |
| 532 | 28.91 | wind | 9 | 43200 | < th | dose independent | rect. | 13 | 18 |
| 538 | 28.92 | wind | 9 | 43200 | < th | dose independent | rect. | 13 | 14 |
| 544 | 28.93 | wind | 9 | 43200 | < th | dose independent | rect. | 13 | 11 |
| 547 | 28.93 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 14 |
| 548 | 28.93 | radiation | 20 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 556 | 28.94 | temperature | 20 | 1440 | < th | dose dependent | sin | 8 | NA |
| 562 | 28.94 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 14 |
| 614 | 28.98 | radiation | 20 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 628 | 28.98 | radiation | 40 | 43200 | < th | dose independent | rect. | 13 | 20 |
| 662 | 28.99 | wind | 7 | 43200 | > th | dose independent | rect. | 15 | 5 |
| 710 | 29.00 | radiation | 40 | 43200 | < th | dose independent | sin | 13 | NA |
| 712 | 29.00 | radiation | 40 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 713 | 29.00 | radiation | 40 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 717 | 29.00 | radiation | 30 | 43200 | < th | dose independent | rect. | 15 | 21 |
| 718 | 29.00 | radiation | 40 | 43200 | < th | dose independent | rect. | 13 | 23 |
| 885 | 29.01 | radiation | 40 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 886 | 29.01 | radiation | 10 | 43200 | < th | dose independent | rect. | 12 | 2 |
| 918 | 29.02 | radiation | 40 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 920 | 29.02 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 5 |
| 929 | 29.02 | radiation | 40 | 43200 | < th | dose independent | rect. | 11 | 22 |
| 934 | 29.02 | radiation | 1 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 948 | 29.03 | radiation | 40 | 43200 | < th | dose independent | sin | 20 | NA |
| 950 | 29.03 | radiation | 40 | 43200 | < th | dose independent | no | NA | NA |
| 954 | 29.03 | radiation | 40 | 43200 | < th | dose independent | rect. | 13 | 6 |
| 956 | 29.03 | radiation | 40 | 43200 | < th | dose independent | rect. | 7 | 8 |