Os01g0695700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Multidrug resistance protein 1 homolog.
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Os01g0695700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Multidrug resistance protein 1 homolog.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 176.76 | 0.625 | 10.9 | -3.11 | 2.64 | -3.54 | 0.596 | -2.47 | -0.665 | 7.89 | 1.345 | 1467 | -- | -- |
| 174.54 | 0.615 | 10.9 | -3.28 | 2.62 | -3.07 | 0.779 | -- | -0.75 | 7.83 | 2.435 | 1475 | -- | -- |
| 176.01 | 0.618 | 10.9 | -3.15 | 2.63 | -3.18 | -- | -1.08 | -0.687 | 7.81 | 2.166 | 1475 | -- | -- |
| 176.31 | 0.618 | 10.9 | -3.26 | 2.62 | -3.06 | -- | -- | -0.747 | 7.84 | 2.414 | 1475 | -- | -- |
| 519.61 | 1.06 | 11 | -3.17 | -- | -3.97 | -- | -0.521 | -0.787 | -- | 2.605 | 1516 | -- | -- |
| 281.49 | 0.787 | 10.8 | -2.7 | 2.8 | -- | 0.549 | -- | -0.322 | 8.14 | -- | -- | -- | -- |
| 282.41 | 0.787 | 10.8 | -2.68 | 2.79 | -- | -- | -- | -0.322 | 8.15 | -- | -- | -- | -- |
| 519.7 | 1.06 | 11 | -3.32 | -- | -3.99 | -- | -- | -0.829 | -- | 2.542 | 1516 | -- | -- |
| 416.37 | 0.95 | 10.9 | -- | 2.65 | -1.59 | -- | -- | -0.335 | 8.01 | 9.41 | 1494 | -- | -- |
| 712.09 | 1.25 | 10.9 | -2.66 | -- | -- | -- | -- | -0.289 | -- | -- | -- | -- | -- |
| 471.7 | 1.02 | 10.8 | -- | 2.78 | -- | -- | -- | -0.0236 | 8.22 | -- | -- | -- | -- |
| 715.86 | 1.25 | 10.9 | -- | -- | -1.3 | -- | -- | -0.0273 | -- | 2.542 | 1516 | -- | -- |
| 898.32 | 1.4 | 10.8 | -- | -- | -- | -- | -- | 0.00583 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 171.12 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 21 |
| 7 | 172.54 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 21 |
| 12 | 173.04 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 21 |
| 22 | 175.33 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 18 |
| 24 | 175.37 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 16 |
| 29 | 175.42 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 12 |
| 51 | 175.83 | radiation | 1 | 1440 | < th | dose independent | sin | 15 | NA |
| 52 | 175.87 | radiation | 1 | 1440 | < th | dose dependent | sin | 16 | NA |
| 66 | 176.15 | radiation | 1 | 1440 | < th | dose dependent | rect. | 12 | 15 |
| 69 | 176.20 | radiation | 1 | 1440 | < th | dose dependent | rect. | 12 | 13 |
| 75 | 176.25 | radiation | 1 | 1440 | < th | dose dependent | rect. | 12 | 9 |
| 112 | 177.12 | radiation | 1 | 1440 | > th | dose independent | sin | 15 | NA |
| 126 | 177.92 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 18 |
| 127 | 177.95 | radiation | 1 | 1440 | < th | dose independent | sin | 21 | NA |
| 129 | 177.96 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 16 |
| 130 | 177.98 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 12 |
| 173 | 178.42 | radiation | 1 | 1440 | < th | dose independent | rect. | 12 | 15 |
| 177 | 178.47 | radiation | 1 | 1440 | < th | dose independent | rect. | 12 | 13 |
| 179 | 178.49 | radiation | 1 | 1440 | < th | dose independent | rect. | 12 | 9 |
| 192 | 178.56 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 22 |
| 193 | 178.57 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 16 |
| 196 | 178.59 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 20 |
| 221 | 179.03 | radiation | 1 | 1440 | > th | dose independent | sin | 21 | NA |
| 227 | 179.10 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 244 | 179.18 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 19 |
| 246 | 179.20 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 249 | 179.21 | radiation | 1 | 1440 | < th | dose dependent | rect. | 24 | 21 |
| 261 | 179.26 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 308 | 179.38 | radiation | 1 | 1440 | > th | dose independent | rect. | 12 | 7 |
| 386 | 180.74 | radiation | 1 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 395 | 181.24 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 22 |
| 407 | 181.26 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 16 |
| 410 | 181.27 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 20 |
| 421 | 181.52 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 19 |
| 424 | 181.53 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 23 |
| 426 | 181.55 | radiation | 1 | 1440 | < th | dose independent | rect. | 24 | 21 |
| 436 | 181.58 | radiation | 1 | 1440 | < th | dose independent | no | NA | NA |
| 512 | 182.65 | radiation | 1 | 1440 | > th | dose independent | rect. | 5 | 14 |
| 539 | 182.94 | radiation | 1 | 1440 | > th | dose independent | no | NA | NA |
| 612 | 183.65 | radiation | 1 | 1440 | < th | dose independent | rect. | 15 | 23 |
| 642 | 185.04 | radiation | 1 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 763 | 189.14 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 764 | 189.24 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 768 | 189.88 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 4 |
| 773 | 190.20 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 12 |
| 790 | 190.90 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 830 | 191.37 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 835 | 191.49 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 836 | 191.63 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 4 |
| 857 | 192.09 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 858 | 192.11 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 860 | 192.13 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 12 |
| 879 | 192.47 | wind | 5 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 891 | 192.66 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 921 | 193.18 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 10 |
| 936 | 193.47 | humidity | 80 | 1440 | < th | dose independent | sin | 0 | NA |
| 954 | 193.65 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 3 |