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Os01g0695600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.29 (0.0263) R2 : 0.461
β1 : -0.934 (0.0963) R2dD : 0.115 R2D : 0.0894
β2 : 1.09 (0.0647) R2dC : 0.336 R2C : 0.324
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.304 (0.0561) R2dN8 : 0.0465 R2N8 : 0.00822
σ : 0.494
deviance : 111.51
__
_____
C
peak time of C : 9.34
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
94.61 0.457 6.31 -0.964 0.698 -0.916 0.43 0.0533 -0.314 5.61 21.64 10 -- --
94.63 0.453 6.31 -0.966 0.699 -0.921 0.429 -- -0.314 5.56 21.59 9 -- --
95.02 0.454 6.31 -0.962 0.704 -0.948 -- 0.0678 -0.314 5.34 21.37 9 -- --
95.04 0.454 6.31 -0.964 0.707 -0.958 -- -- -0.316 5.26 21.14 9 -- --
119.29 0.511 6.32 -0.944 -- -0.833 -- 0.075 -0.299 -- 16.59 6 -- --
110.61 0.493 6.29 -0.952 1.09 -- 0.498 -- -0.305 9.33 -- -- -- --
111.51 0.494 6.29 -0.934 1.09 -- -- -- -0.304 9.34 -- -- -- --
119.32 0.511 6.32 -0.946 -- -0.832 -- -- -0.3 -- 16.45 6 -- --
119.45 0.509 6.29 -- 0.681 -0.939 -- -- -0.207 5.33 20.07 9 -- --
180.56 0.628 6.32 -0.94 -- -- -- -- -0.3 -- -- -- -- --
134.52 0.543 6.27 -- 1.09 -- -- -- -0.2 9.4 -- -- -- --
141.57 0.554 6.3 -- -- -0.815 -- -- -0.201 -- 11.46 2 -- --
203.86 0.666 6.3 -- -- -- -- -- -0.196 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 83.96 temperature 15.0 270 > th dose independent rect. 8 15
2 85.37 temperature 15.0 270 > th dose independent rect. 19 17
5 85.80 temperature 15.0 270 > th dose independent rect. 17 22
8 86.59 temperature 15.0 270 > th dose independent rect. 18 20
12 87.48 radiation 10.0 10 < th dose dependent rect. 6 14
18 87.82 radiation 20.0 10 < th dose dependent rect. 2 18
22 87.99 temperature 15.0 90 > th dose dependent rect. 20 5
23 88.04 radiation 10.0 10 < th dose dependent sin 0 NA
26 88.08 temperature 10.0 10 > th dose dependent rect. 20 6
28 88.20 radiation 40.0 10 < th dose dependent rect. 13 7
43 88.59 temperature 15.0 10 > th dose independent rect. 20 19
48 88.79 temperature 15.0 270 > th dose independent rect. 18 7
57 89.18 temperature 15.0 10 > th dose independent rect. 20 6
61 89.31 radiation 10.0 10 < th dose independent rect. 7 13
66 89.44 temperature 15.0 270 > th dose dependent rect. 20 2
79 89.67 radiation 20.0 30 < th dose independent rect. 13 7
85 89.82 humidity 70.0 270 > th dose independent rect. 23 9
94 90.02 radiation 20.0 10 < th dose independent rect. 2 18
102 90.11 radiation 30.0 270 < th dose independent rect. 23 9
112 90.27 wind 1.0 270 > th dose independent rect. 12 7
126 90.38 radiation 1.0 270 > th dose independent rect. 7 7
134 90.45 precipitation 0.1 270 < th dose independent rect. 8 15
135 90.45 precipitation 0.1 270 < th dose dependent rect. 8 15
139 90.48 precipitation 0.1 270 < th dose independent rect. 17 22
141 90.48 precipitation 0.1 270 < th dose dependent rect. 17 22
146 90.54 atmosphere 1015.0 270 < th dose independent rect. 8 15
150 90.57 humidity 50.0 10 > th dose dependent rect. 2 18
152 90.64 atmosphere 1010.0 10 < th dose independent rect. 20 6
160 90.76 temperature 10.0 270 > th dose independent rect. 23 9
161 90.76 temperature 30.0 270 < th dose independent rect. 23 9
162 90.76 humidity 50.0 270 > th dose independent rect. 23 9
164 90.76 atmosphere 995.0 270 > th dose independent rect. 23 9
169 90.77 wind 9.0 270 < th dose independent rect. 23 9
176 90.84 atmosphere 1015.0 90 < th dose independent rect. 20 19
180 90.86 temperature 30.0 270 < th dose independent rect. 19 17
181 90.86 atmosphere 1015.0 270 < th dose independent rect. 19 17
185 90.88 humidity 90.0 90 < th dose independent rect. 20 19
190 90.92 precipitation 0.1 90 < th dose independent rect. 20 19
191 90.92 precipitation 0.1 90 < th dose dependent rect. 20 19
196 90.96 atmosphere 995.0 90 > th dose independent rect. 15 5
199 90.98 wind 9.0 270 < th dose independent rect. 12 7
203 91.01 precipitation 0.1 270 < th dose independent rect. 19 17
204 91.01 precipitation 0.1 270 < th dose dependent rect. 19 17
206 91.05 wind 9.0 90 < th dose independent rect. 15 5
210 91.11 temperature 15.0 270 > th dose independent rect. 7 7
212 91.14 wind 1.0 90 > th dose independent rect. 15 5
214 91.18 temperature 10.0 90 > th dose independent rect. 15 5
216 91.18 atmosphere 1010.0 90 < th dose independent rect. 15 5
222 91.19 wind 9.0 270 < th dose independent rect. 15 2
227 91.26 wind 9.0 90 < th dose independent rect. 20 19
230 91.29 wind 1.0 270 > th dose independent rect. 15 2
234 91.30 wind 9.0 270 < th dose independent rect. 19 17
236 91.30 wind 7.0 10 < th dose independent rect. 20 19
237 91.31 atmosphere 995.0 90 > th dose independent rect. 20 19
238 91.32 temperature 10.0 270 > th dose independent rect. 12 7
240 91.32 atmosphere 1015.0 270 < th dose independent rect. 12 7
242 91.32 atmosphere 995.0 270 > th dose independent rect. 19 17
250 91.37 humidity 80.0 10 < th dose independent rect. 9 7
254 91.39 precipitation 0.1 270 < th dose independent rect. 23 9
255 91.39 precipitation 0.1 270 < th dose dependent rect. 23 9
262 91.43 radiation 40.0 270 < th dose independent rect. 15 2
263 91.43 radiation 20.0 10 < th dose dependent rect. 23 23
265 91.46 temperature 10.0 270 > th dose independent rect. 15 2
267 91.46 atmosphere 1010.0 270 < th dose independent rect. 15 2
282 91.51 wind 9.0 270 < th dose independent rect. 8 15
288 91.54 humidity 50.0 270 > th dose dependent rect. 23 9
299 91.65 precipitation 0.1 270 < th dose independent rect. 15 2
300 91.65 wind 1.0 10 > th dose independent rect. 15 5
302 91.65 precipitation 0.1 270 < th dose dependent rect. 15 2
318 91.67 humidity 90.0 10 < th dose dependent rect. 20 20
319 91.68 temperature 10.0 1440 > th dose independent rect. 16 5
323 91.68 temperature 10.0 1440 > th dose independent rect. 21 19
335 91.73 atmosphere 995.0 270 > th dose independent rect. 15 2
343 91.78 atmosphere 995.0 270 > th dose independent rect. 12 7
344 91.78 radiation 10.0 10 > th dose independent rect. 9 7
359 91.89 precipitation 0.1 270 < th dose independent rect. 18 20
360 91.89 precipitation 0.1 270 < th dose dependent rect. 18 20
361 91.89 radiation 40.0 90 < th dose dependent rect. 13 21
364 91.92 radiation 40.0 10 < th dose dependent rect. 13 21
369 91.94 humidity 50.0 30 > th dose independent rect. 15 5
372 91.96 humidity 50.0 270 > th dose independent rect. 19 17
373 91.97 radiation 1.0 270 > th dose independent rect. 4 10
400 92.01 precipitation 0.1 270 < th dose independent rect. 12 7
402 92.01 precipitation 0.1 270 < th dose dependent rect. 12 7
410 92.04 wind 9.0 270 < th dose independent rect. 17 22
415 92.08 humidity 90.0 90 < th dose independent rect. 9 6
432 92.17 wind 1.0 10 > th dose independent rect. 20 6
436 92.18 radiation 10.0 10 > th dose independent rect. 9 9
457 92.21 wind 1.0 10 > th dose independent rect. 20 8
461 92.22 atmosphere 1015.0 270 < th dose independent rect. 23 9
464 92.23 radiation 40.0 90 < th dose dependent rect. 15 19
471 92.26 radiation 40.0 270 < th dose dependent rect. 23 9
475 92.28 atmosphere 995.0 270 > th dose independent rect. 18 20
486 92.30 precipitation 0.1 10 < th dose independent rect. 15 5
488 92.30 precipitation 0.1 10 < th dose dependent rect. 15 5
493 92.33 precipitation 0.1 90 < th dose independent rect. 15 5
496 92.33 precipitation 0.1 90 < th dose dependent rect. 15 5
498 92.34 radiation 10.0 10 > th dose independent sin 22 NA
499 92.34 temperature 15.0 10 > th dose independent rect. 10 16
508 92.36 temperature 30.0 270 < th dose independent rect. 18 8
535 92.45 wind 9.0 270 < th dose independent rect. 18 20
536 92.45 atmosphere 1015.0 270 < th dose independent rect. 18 20
540 92.46 temperature 10.0 10 > th dose dependent rect. 20 19
553 92.50 wind 1.0 270 > th dose independent rect. 18 8
559 92.52 radiation 30.0 90 < th dose independent rect. 1 9
566 92.54 humidity 70.0 10 > th dose independent rect. 2 18
593 92.62 precipitation 0.1 270 < th dose independent rect. 7 7
594 92.62 humidity 60.0 270 > th dose independent rect. 18 8
595 92.62 wind 9.0 270 < th dose independent rect. 14 17
597 92.62 precipitation 0.1 270 < th dose dependent rect. 7 7
664 92.80 atmosphere 995.0 270 > th dose independent rect. 7 7
665 92.80 atmosphere 1015.0 270 < th dose independent rect. 7 7
666 92.80 temperature 10.0 270 > th dose independent rect. 14 17
696 92.87 radiation 1.0 270 < th dose independent rect. 18 8
725 92.92 wind 9.0 270 < th dose independent rect. 7 7
773 93.01 atmosphere 995.0 10 > th dose dependent rect. 15 5
785 93.03 wind 9.0 270 < th dose independent rect. 2 16
789 93.04 humidity 50.0 90 > th dose dependent rect. 1 9
810 93.11 wind 9.0 10 < th dose independent rect. 20 6
820 93.12 temperature 30.0 10 < th dose independent rect. 20 6
821 93.12 humidity 50.0 10 > th dose independent rect. 20 6
824 93.12 atmosphere 995.0 10 > th dose independent rect. 20 6
825 93.12 radiation 1.0 10 < th dose independent rect. 20 6
830 93.12 precipitation 0.1 10 < th dose independent rect. 20 6
833 93.12 humidity 80.0 90 < th dose independent rect. 7 8
836 93.12 temperature 10.0 10 > th dose independent rect. 2 18
838 93.12 atmosphere 1015.0 10 < th dose independent rect. 2 18
841 93.12 radiation 1.0 10 < th dose dependent rect. 20 6
846 93.12 precipitation 0.1 10 < th dose dependent rect. 20 6
878 93.20 temperature 10.0 270 > th dose dependent rect. 24 8
879 93.20 radiation 10.0 270 < th dose dependent rect. 18 8
883 93.21 radiation 40.0 270 < th dose independent rect. 14 17
895 93.23 atmosphere 995.0 10 > th dose independent rect. 2 18
901 93.24 atmosphere 995.0 270 > th dose independent rect. 14 17
902 93.24 wind 9.0 30 < th dose independent rect. 2 18
936 93.32 wind 9.0 270 < th dose independent rect. 18 8
942 93.32 wind 1.0 270 > th dose independent rect. 8 15
943 93.32 temperature 10.0 270 > th dose independent rect. 2 16
944 93.32 atmosphere 1015.0 270 < th dose independent rect. 2 16
948 93.33 atmosphere 995.0 270 > th dose independent rect. 18 8
952 93.33 radiation 10.0 270 < th dose dependent rect. 23 19