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Os01g0695500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.7 (0.0235) R2 : 0.634
β1 : 1.91 (0.0861) R2dD : 0.411 R2D : 0.362
β2 : 1.02 (0.0598) R2dC : 0.234 R2C : 0.23
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.261 (0.0502) R2dN8 : 0.0291 R2N8 : -0.0136
σ : 0.442
deviance : 89.15
__
_____
C
peak time of C : 8.04
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
79.33 0.418 7.72 1.9 0.899 -0.755 -0.291 -0.212 0.244 4.62 12.23 9 -- --
79.1 0.414 7.72 1.9 0.904 -0.791 -0.409 -- 0.246 4.42 12 6 -- --
79.1 0.414 7.71 1.9 0.891 -0.755 -- -0.274 0.248 4.63 12 6 -- --
79.14 0.414 7.72 1.91 0.884 -0.776 -- -- 0.25 4.49 11.73 3 -- --
115.22 0.503 7.72 1.93 -- -0.544 -- -0.313 0.263 -- 7.682 4 -- --
89.04 0.442 7.7 1.91 1.02 -- 0.19 -- 0.261 8.07 -- -- -- --
89.15 0.442 7.7 1.91 1.02 -- -- -- 0.261 8.04 -- -- -- --
114.93 0.499 7.72 1.94 -- -0.558 -- -- 0.263 -- 7.865 2 -- --
174.26 0.615 7.76 -- 0.945 -0.795 -- -- 0.0445 4.61 17.98 6 -- --
145.71 0.564 7.72 1.92 -- -- -- -- 0.274 -- -- -- -- --
185.41 0.637 7.74 -- 1.03 -- -- -- 0.0482 7.91 -- -- -- --
213.39 0.68 7.77 -- -- -0.543 -- -- 0.0452 -- 6.58 2 -- --
243.01 0.728 7.77 -- -- -- -- -- 0.0607 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 77.06 wind 1 43200 < th dose independent rect. 13 2
2 77.15 wind 5 4320 > th dose dependent rect. 14 1
3 77.24 humidity 90 14400 < th dose independent rect. 6 1
4 77.26 wind 7 4320 > th dose independent rect. 14 2
5 77.32 wind 1 43200 < th dose dependent rect. 13 1
6 77.35 wind 1 43200 > th dose independent rect. 13 2
7 77.35 humidity 90 14400 < th dose independent rect. 4 3
10 77.45 wind 7 4320 < th dose independent rect. 14 2
18 77.77 radiation 30 43200 > th dose dependent rect. 16 1
34 77.80 humidity 90 14400 > th dose independent rect. 6 1
39 77.94 wind 7 4320 > th dose independent rect. 14 12
40 77.96 humidity 90 14400 > th dose independent rect. 5 3
42 78.03 wind 5 4320 > th dose dependent rect. 14 12
57 78.26 wind 7 4320 < th dose independent rect. 14 12
63 78.30 humidity 80 14400 > th dose dependent rect. 6 2
99 78.71 radiation 20 14400 > th dose independent rect. 16 1
140 78.76 radiation 20 10 < th dose dependent rect. 13 22
149 78.86 humidity 80 43200 < th dose dependent rect. 7 1
192 79.15 radiation 40 43200 < th dose independent rect. 16 15
194 79.20 wind 5 4320 > th dose dependent sin 17 NA
206 79.25 radiation 20 10 < th dose dependent rect. 6 23
234 79.36 radiation 40 43200 < th dose independent rect. 16 5
244 79.39 radiation 20 10 < th dose dependent rect. 8 12
248 79.40 radiation 10 43200 < th dose dependent rect. 17 12
252 79.41 radiation 40 43200 > th dose dependent rect. 14 18
254 79.42 radiation 10 43200 < th dose dependent rect. 17 9
262 79.44 wind 7 4320 > th dose independent sin 17 NA
265 79.44 radiation 10 43200 < th dose dependent rect. 17 2
270 79.45 radiation 40 43200 > th dose dependent rect. 14 2
294 79.47 radiation 40 43200 < th dose dependent rect. 17 9
296 79.48 wind 1 43200 > th dose independent rect. 13 6
323 79.53 radiation 10 10 < th dose dependent rect. 23 23
373 79.59 radiation 1 14400 > th dose independent rect. 7 9
388 79.64 radiation 1 14400 < th dose independent rect. 7 9
400 79.69 wind 7 4320 < th dose independent sin 17 NA
420 79.75 wind 5 14400 < th dose dependent rect. 12 3
427 79.77 radiation 40 43200 < th dose independent rect. 16 9
434 79.79 radiation 10 10 < th dose dependent rect. 9 23
457 79.82 wind 1 43200 < th dose independent rect. 22 1
460 79.82 radiation 10 10 < th dose dependent no NA NA
468 79.83 radiation 10 10 < th dose dependent rect. 15 23
471 79.84 radiation 1 14400 > th dose independent rect. 7 6
477 79.86 humidity 80 14400 > th dose independent rect. 17 6
481 79.86 humidity 60 14400 > th dose dependent rect. 17 15
484 79.88 wind 1 43200 > th dose independent rect. 22 1
486 79.88 temperature 25 14400 < th dose dependent rect. 6 2
503 79.92 radiation 1 14400 < th dose independent rect. 7 6
511 79.93 humidity 90 14400 > th dose independent rect. 1 9
531 79.96 atmosphere 1005 10 > th dose independent rect. 2 18
539 79.97 wind 7 4320 > th dose independent rect. 13 21
540 79.97 temperature 25 14400 < th dose dependent rect. 5 4
552 79.99 humidity 90 14400 > th dose independent rect. 1 11
554 79.99 humidity 70 14400 > th dose dependent rect. 19 1
574 80.02 humidity 90 14400 < th dose independent sin 6 NA
575 80.02 humidity 80 14400 > th dose independent rect. 18 2
600 80.03 atmosphere 995 90 > th dose dependent rect. 1 19
617 80.05 humidity 60 14400 > th dose dependent rect. 18 8
621 80.06 humidity 90 14400 > th dose independent sin 5 NA
626 80.06 humidity 60 14400 > th dose dependent sin 12 NA
647 80.07 radiation 40 43200 < th dose dependent rect. 21 8
661 80.08 temperature 20 14400 < th dose dependent rect. 19 7
674 80.09 humidity 90 14400 > th dose independent rect. 24 18
686 80.10 humidity 70 14400 > th dose dependent rect. 19 4
709 80.12 atmosphere 1010 14400 < th dose independent rect. 20 1
726 80.13 humidity 70 14400 > th dose independent rect. 16 1
736 80.13 humidity 90 14400 < th dose dependent rect. 18 7
743 80.13 radiation 10 10 < th dose dependent rect. 21 23
758 80.15 wind 7 4320 < th dose independent rect. 13 21
784 80.17 humidity 80 14400 < th dose independent rect. 17 6
821 80.19 humidity 90 14400 < th dose independent rect. 19 13
835 80.20 humidity 80 14400 < th dose independent rect. 19 1
838 80.20 wind 1 14400 > th dose independent rect. 9 10
859 80.21 temperature 20 14400 > th dose independent rect. 6 2
876 80.22 humidity 80 14400 > th dose independent sin 15 NA
904 80.22 radiation 20 10 < th dose dependent rect. 8 21
927 80.24 humidity 70 43200 > th dose independent rect. 7 1
953 80.25 temperature 20 14400 < th dose independent rect. 6 2