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Os01g0695200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF266, plant family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.9 (0.0212) R2 : 0.784
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.06 (0.0515) R2dC : 0.762 R2C : 0.75
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.333 (0.0445) R2dN8 : 0.0341 R2N8 : 0.022
σ : 0.399
deviance : 72.79
__
_____
C
peak time of C : 10
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
53.79 0.345 10.9 0.112 1.31 -0.973 -0.314 0.527 -0.331 8.56 21.91 10 -- --
54.57 0.344 10.9 0.11 1.34 -0.933 -0.757 -- -0.325 8.65 22.51 9 -- --
53.96 0.342 10.9 0.108 1.31 -0.967 -- 0.696 -0.33 8.59 21.77 9 -- --
56.44 0.35 10.9 0.0867 1.32 -0.945 -- -- -0.332 8.61 21.09 9 -- --
108.56 0.488 11 0.14 -- -1.54 -- 0.741 -0.316 -- 12.97 11 -- --
71.08 0.395 10.9 0.139 2.06 -- -0.589 -- -0.319 10 -- -- -- --
72.44 0.399 10.9 0.116 2.06 -- -- -- -0.32 10 -- -- -- --
111.45 0.494 11 0.135 -- -1.52 -- -- -0.319 -- 11.55 12 -- --
56.64 0.351 10.9 -- 1.32 -0.948 -- -- -0.341 8.6 21.41 9 -- --
328.41 0.847 11 0.0907 -- -- -- -- -0.321 -- -- -- -- --
72.79 0.399 10.9 -- 2.06 -- -- -- -0.333 10 -- -- -- --
111.78 0.492 11 -- -- -1.52 -- -- -0.335 -- 11.62 3 -- --
328.63 0.846 11 -- -- -- -- -- -0.331 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 47.49 temperature 10.0 270 > th dose dependent rect. 14 15
7 48.38 radiation 30.0 10 < th dose dependent rect. 2 18
15 48.76 temperature 10.0 270 > th dose dependent rect. 13 6
19 48.99 temperature 10.0 270 > th dose dependent rect. 14 4
34 49.76 humidity 70.0 270 > th dose independent rect. 17 8
38 49.82 humidity 70.0 90 > th dose independent rect. 19 7
39 49.85 temperature 30.0 270 < th dose independent rect. 17 8
40 49.85 radiation 10.0 10 < th dose independent rect. 2 18
67 50.49 radiation 10.0 10 < th dose dependent sin 0 NA
69 50.49 humidity 50.0 270 > th dose dependent rect. 23 10
71 50.51 radiation 1.0 270 < th dose independent rect. 17 8
84 50.80 precipitation 0.1 90 < th dose independent rect. 2 17
86 50.80 precipitation 0.1 90 < th dose dependent rect. 2 17
87 50.83 atmosphere 995.0 90 > th dose independent rect. 2 17
91 50.86 radiation 1.0 270 < th dose dependent rect. 17 8
94 50.91 wind 9.0 270 < th dose independent rect. 13 5
98 50.94 precipitation 0.1 270 < th dose independent rect. 13 5
100 50.94 precipitation 0.1 270 < th dose dependent rect. 13 5
101 50.96 atmosphere 995.0 270 > th dose independent rect. 18 19
107 51.03 humidity 50.0 270 > th dose independent rect. 17 21
108 51.04 temperature 10.0 90 > th dose independent rect. 19 7
109 51.04 temperature 30.0 90 < th dose independent rect. 19 7
110 51.04 humidity 50.0 90 > th dose independent rect. 19 7
112 51.04 atmosphere 995.0 90 > th dose independent rect. 19 7
113 51.04 radiation 1.0 90 < th dose independent rect. 19 7
118 51.04 temperature 10.0 90 > th dose independent rect. 2 17
119 51.04 atmosphere 1015.0 90 < th dose independent rect. 2 17
120 51.04 atmosphere 995.0 270 > th dose independent rect. 17 21
122 51.04 radiation 1.0 90 < th dose dependent rect. 19 7
132 51.10 wind 1.0 270 > th dose independent rect. 13 5
134 51.11 wind 9.0 90 < th dose independent rect. 19 7
143 51.21 temperature 15.0 10 > th dose dependent rect. 16 4
144 51.22 wind 9.0 90 < th dose independent rect. 2 17
147 51.24 temperature 10.0 270 > th dose independent rect. 13 5
149 51.24 atmosphere 1010.0 270 < th dose independent rect. 13 5
151 51.24 temperature 10.0 270 > th dose independent rect. 18 19
152 51.25 humidity 50.0 270 > th dose independent rect. 18 19
154 51.26 temperature 10.0 270 > th dose dependent rect. 23 9
156 51.28 radiation 1.0 270 > th dose independent rect. 13 6
169 51.31 wind 9.0 270 < th dose independent rect. 14 3
174 51.37 precipitation 0.1 90 < th dose independent rect. 19 7
175 51.37 precipitation 0.1 90 < th dose dependent rect. 19 7
181 51.42 wind 9.0 270 < th dose independent rect. 18 19
182 51.43 wind 1.0 270 > th dose independent rect. 14 3
184 51.44 precipitation 0.1 270 < th dose independent rect. 14 3
196 51.44 precipitation 0.1 270 < th dose dependent rect. 14 3
198 51.46 precipitation 0.1 270 < th dose independent rect. 18 19
200 51.46 precipitation 0.1 270 < th dose dependent rect. 18 19
203 51.49 radiation 1.0 270 > th dose independent sin 16 NA
210 51.51 radiation 40.0 90 < th dose dependent rect. 13 6
211 51.52 temperature 10.0 270 > th dose independent rect. 14 3
213 51.52 atmosphere 1010.0 270 < th dose independent rect. 14 3
216 51.52 temperature 10.0 270 > th dose independent rect. 17 21
218 51.56 radiation 40.0 10 < th dose dependent rect. 12 8
223 51.58 radiation 1.0 270 < th dose independent sin 16 NA
230 51.70 radiation 40.0 270 < th dose independent rect. 14 3
234 51.72 wind 1.0 90 > th dose independent rect. 19 8
235 51.72 radiation 40.0 90 < th dose independent rect. 2 17
245 51.77 radiation 1.0 270 < th dose dependent sin 16 NA
248 51.79 temperature 20.0 270 > th dose independent rect. 13 17
258 51.86 temperature 25.0 270 > th dose independent rect. 14 4
259 51.86 radiation 30.0 90 < th dose independent rect. 13 6
274 51.91 atmosphere 995.0 270 > th dose independent rect. 14 3
304 52.03 radiation 20.0 10 < th dose dependent rect. 13 21
306 52.04 wind 9.0 270 < th dose independent rect. 17 21
327 52.06 atmosphere 995.0 270 > th dose independent rect. 13 5
334 52.10 humidity 70.0 10 > th dose independent rect. 19 7
363 52.16 precipitation 0.1 270 < th dose independent rect. 17 21
365 52.16 precipitation 0.1 270 < th dose dependent rect. 17 21
371 52.21 radiation 1.0 270 > th dose independent rect. 4 10
385 52.25 humidity 80.0 270 > th dose independent rect. 23 9
398 52.30 humidity 90.0 270 < th dose independent rect. 14 4
455 52.47 wind 1.0 270 > th dose independent rect. 18 19
468 52.49 radiation 40.0 270 < th dose dependent rect. 23 10
470 52.50 atmosphere 995.0 90 > th dose dependent rect. 19 7
476 52.52 temperature 25.0 270 > th dose independent rect. 13 6
493 52.57 radiation 40.0 90 < th dose dependent rect. 15 4
503 52.59 radiation 20.0 10 < th dose dependent rect. 7 13
509 52.61 radiation 10.0 10 < th dose independent rect. 7 13
540 52.70 precipitation 0.1 270 < th dose independent rect. 14 15
543 52.70 precipitation 0.1 270 < th dose dependent rect. 14 15
564 52.76 temperature 10.0 1440 > th dose independent rect. 20 7
567 52.76 temperature 30.0 1440 < th dose independent rect. 20 7
571 52.76 humidity 50.0 1440 > th dose independent rect. 20 7
577 52.76 atmosphere 995.0 1440 > th dose independent rect. 20 7
578 52.76 radiation 1.0 1440 < th dose independent rect. 20 7
599 52.76 temperature 10.0 1440 > th dose independent rect. 3 17
602 52.76 radiation 40.0 1440 < th dose dependent rect. 20 7
605 52.77 radiation 20.0 1440 < th dose dependent rect. 20 7
653 52.95 precipitation 0.1 270 < th dose independent rect. 5 9
654 52.95 precipitation 0.1 270 < th dose dependent rect. 5 9
676 53.01 temperature 10.0 270 > th dose dependent rect. 24 19
677 53.02 wind 9.0 270 < th dose independent rect. 14 15
680 53.02 temperature 15.0 10 > th dose dependent rect. 16 15
740 53.21 humidity 80.0 10 < th dose independent rect. 21 19
774 53.28 temperature 10.0 270 > th dose independent rect. 5 9
775 53.28 atmosphere 995.0 270 > th dose independent rect. 5 9
776 53.28 atmosphere 1015.0 270 < th dose independent rect. 5 9
777 53.28 temperature 10.0 270 > th dose independent rect. 14 15
834 53.42 atmosphere 995.0 10 > th dose independent rect. 2 18
853 53.48 humidity 50.0 270 > th dose dependent rect. 17 7
855 53.49 temperature 20.0 10 > th dose independent rect. 16 4
866 53.50 humidity 50.0 10 > th dose dependent rect. 2 17
869 53.51 humidity 50.0 90 > th dose dependent rect. 19 7
881 53.55 temperature 20.0 10 > th dose independent rect. 14 6
902 53.59 temperature 10.0 10 > th dose independent rect. 20 6
903 53.59 temperature 30.0 10 < th dose independent rect. 20 6
904 53.59 humidity 50.0 10 > th dose independent rect. 20 6
907 53.59 atmosphere 995.0 10 > th dose independent rect. 20 6
908 53.59 radiation 1.0 10 < th dose independent rect. 20 6
913 53.59 temperature 10.0 10 > th dose independent rect. 2 18
915 53.59 atmosphere 1015.0 10 < th dose independent rect. 2 18
916 53.59 radiation 1.0 10 < th dose dependent rect. 20 6
924 53.60 wind 9.0 270 < th dose independent rect. 5 9
939 53.62 humidity 80.0 90 < th dose independent rect. 21 18
951 53.64 wind 9.0 10 < th dose independent rect. 20 6
964 53.66 humidity 50.0 270 > th dose independent rect. 8 15
972 53.68 precipitation 0.1 10 < th dose independent rect. 2 18
975 53.68 precipitation 0.1 10 < th dose dependent rect. 2 18
985 53.71 temperature 20.0 270 > th dose independent rect. 23 8
995 53.73 precipitation 0.1 10 < th dose independent rect. 20 6
998 53.73 precipitation 0.1 10 < th dose dependent rect. 20 6