Os01g0694800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0694800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 83.48 | 0.429 | 9.58 | 1.08 | 0.612 | 2.36 | 0.503 | 0.0185 | -0.0479 | 7.82 | 25.79 | 1470 | -- | -- |
| 83.45 | 0.425 | 9.58 | 1.08 | 0.611 | 2.35 | 0.507 | -- | -0.0468 | 7.84 | 26.13 | 1480 | -- | -- |
| 84.08 | 0.427 | 9.57 | 1.14 | 0.601 | 2.33 | -- | -0.235 | -0.0302 | 8.11 | 26.37 | 1517 | -- | -- |
| 84.11 | 0.427 | 9.58 | 1.1 | 0.604 | 2.35 | -- | -- | -0.0443 | 8.1 | 26.11 | 1517 | -- | -- |
| 87.76 | 0.436 | 9.6 | 1.14 | -- | 2.4 | -- | -1.08 | -0.147 | -- | 33.1 | 649 | -- | -- |
| 159.89 | 0.593 | 9.7 | 0.36 | 0.587 | -- | 0.533 | -- | -0.564 | 8.22 | -- | -- | -- | -- |
| 160.71 | 0.594 | 9.7 | 0.377 | 0.584 | -- | -- | -- | -0.563 | 8.41 | -- | -- | -- | -- |
| 88.79 | 0.439 | 9.6 | 0.983 | -- | 2.38 | -- | -- | -0.154 | -- | 32.15 | 656 | -- | -- |
| 110.92 | 0.491 | 9.63 | -- | 0.614 | 1.81 | -- | -- | -0.264 | 7.92 | 26.27 | 1459 | -- | -- |
| 179.72 | 0.626 | 9.71 | 0.38 | -- | -- | -- | -- | -0.557 | -- | -- | -- | -- | -- |
| 164.44 | 0.6 | 9.7 | -- | 0.586 | -- | -- | -- | -0.605 | 8.37 | -- | -- | -- | -- |
| 111.1 | 0.491 | 9.66 | -- | -- | 2.06 | -- | -- | -0.338 | -- | 33.3 | 613 | -- | -- |
| 183.53 | 0.632 | 9.72 | -- | -- | -- | -- | -- | -0.599 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 76.77 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 5 | 77.41 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 12 | 77.63 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 6 |
| 32 | 77.83 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 9 |
| 224 | 78.99 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
| 275 | 79.28 | temperature | 15 | 1440 | > th | dose dependent | sin | 11 | NA |
| 725 | 82.33 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |