Os01g0694600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : DVL family protein.
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Os01g0694600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : DVL family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 60.93 | 0.367 | 2.87 | -0.0126 | 0.0284 | -0.439 | 0.102 | 1.35 | 0.114 | 12.2 | 1.052 | 16 | -- | -- |
| 62.33 | 0.371 | 2.86 | 0.0505 | 0.0113 | -0.287 | -0.299 | -- | 0.129 | 3.66 | 1.052 | 16 | -- | -- |
| 60.81 | 0.366 | 2.87 | -0.00561 | 0.0398 | -0.376 | -- | 1.23 | 0.117 | 9.31 | 1.065 | 16 | -- | -- |
| 62.48 | 0.371 | 2.85 | 0.0565 | 0.0468 | -0.277 | -- | -- | 0.13 | 8.27 | 1.065 | 16 | -- | -- |
| 60.9 | 0.365 | 2.87 | -0.00643 | -- | -0.379 | -- | 1.24 | 0.117 | -- | 1.065 | 16 | -- | -- |
| 64.78 | 0.377 | 2.86 | 0.0861 | 0.113 | -- | -0.219 | -- | 0.124 | 5.08 | -- | -- | -- | -- |
| 64.88 | 0.377 | 2.85 | 0.0867 | 0.114 | -- | -- | -- | 0.125 | 5.59 | -- | -- | -- | -- |
| 62.6 | 0.37 | 2.86 | 0.0558 | -- | -0.286 | -- | -- | 0.131 | -- | 1.065 | 16 | -- | -- |
| 62.57 | 0.37 | 2.86 | -- | 0.0463 | -0.282 | -- | -- | 0.124 | 8.29 | 1.095 | 16 | -- | -- |
| 65.56 | 0.378 | 2.86 | 0.0904 | -- | -- | -- | -- | 0.128 | -- | -- | -- | -- | -- |
| 65.08 | 0.377 | 2.86 | -- | 0.115 | -- | -- | -- | 0.116 | 5.56 | -- | -- | -- | -- |
| 62.68 | 0.37 | 2.86 | -- | -- | -0.29 | -- | -- | 0.125 | -- | 1.065 | 16 | -- | -- |
| 65.77 | 0.379 | 2.86 | -- | -- | -- | -- | -- | 0.118 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 55.20 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 2 | 55.20 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 4 | 55.20 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 5 | 55.20 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 8 | 55.21 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 11 | 55.21 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 16 | 55.22 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 18 | 55.22 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 20 | 55.22 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 25 | 55.22 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 26 | 55.22 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 28 | 55.22 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 33 | 55.22 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 34 | 55.22 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 35 | 55.22 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 40 | 55.22 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 45 | 55.22 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 48 | 55.24 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 50 | 55.26 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 56 | 55.32 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 99 | 55.42 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 100 | 55.42 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 103 | 55.49 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 111 | 55.73 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 116 | 55.76 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 120 | 55.93 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 121 | 55.93 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 124 | 55.93 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 128 | 55.93 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 137 | 55.93 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 138 | 55.93 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 158 | 55.93 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 190 | 57.30 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 218 | 58.92 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 263 | 59.65 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 292 | 60.08 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 7 |
| 293 | 60.08 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 24 | 6 |
| 297 | 60.12 | humidity | 90.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 300 | 60.15 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 309 | 60.19 | wind | 1.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 341 | 60.58 | wind | 1.0 | 10 | > th | dose independent | sin | 15 | NA |
| 363 | 60.75 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 446 | 61.10 | wind | 9.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 449 | 61.13 | wind | 1.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 473 | 61.27 | humidity | 90.0 | 10 | > th | dose independent | rect. | 24 | 3 |
| 478 | 61.29 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 496 | 61.39 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 499 | 61.41 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 511 | 61.48 | radiation | 1.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 519 | 61.55 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 522 | 61.57 | wind | 1.0 | 10 | > th | dose independent | no | NA | NA |
| 550 | 61.71 | wind | 3.0 | 10 | < th | dose dependent | rect. | 22 | 5 |
| 558 | 61.76 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 19 | 8 |
| 634 | 61.97 | wind | 1.0 | 10 | > th | dose independent | rect. | 17 | 23 |
| 683 | 62.09 | wind | 1.0 | 10 | < th | dose independent | sin | 15 | NA |
| 687 | 62.09 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 7 |
| 692 | 62.09 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 696 | 62.10 | humidity | 50.0 | 720 | > th | dose independent | rect. | 3 | 8 |
| 789 | 62.20 | wind | 1.0 | 10 | > th | dose independent | rect. | 20 | 15 |
| 793 | 62.20 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 794 | 62.21 | temperature | 10.0 | 720 | > th | dose independent | rect. | 15 | 8 |
| 795 | 62.21 | temperature | 10.0 | 720 | > th | dose independent | rect. | 23 | 16 |
| 816 | 62.26 | wind | 9.0 | 720 | < th | dose independent | rect. | 3 | 8 |
| 821 | 62.27 | temperature | 10.0 | 720 | > th | dose independent | rect. | 3 | 8 |
| 822 | 62.27 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 3 | 8 |
| 823 | 62.27 | temperature | 10.0 | 720 | > th | dose independent | rect. | 11 | 16 |
| 857 | 62.35 | wind | 3.0 | 720 | < th | dose independent | rect. | 2 | 1 |
| 942 | 62.40 | wind | 1.0 | 10 | > th | dose independent | rect. | 8 | 23 |
| 948 | 62.40 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 949 | 62.41 | wind | 1.0 | 10 | > th | dose independent | rect. | 18 | 17 |
| 955 | 62.43 | temperature | 10.0 | 720 | > th | dose independent | rect. | 7 | 8 |
| 956 | 62.43 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 7 | 8 |
| 959 | 62.43 | temperature | 10.0 | 720 | > th | dose independent | rect. | 15 | 16 |