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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0694500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.88 (0.026) R2 : 0.000853
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0342 (0.0547) R2dN8 : 0.0011 R2N8 : 0.000853
σ : 0.49
deviance : 110.05
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
105.3 0.482 2.88 -0.124 0.114 0.813 -0.0527 -0.108 -0.0338 12.9 1015 748 -- --
105.29 0.478 2.88 -0.123 0.114 0.873 -0.0502 -- -0.034 12.9 1015 746 -- --
105.3 0.478 2.88 -0.125 0.114 0.96 -- 0.163 -0.0322 13.1 1015 749 -- --
105.3 0.478 2.88 -0.123 0.114 0.881 -- -- -0.0339 13 1015 745 -- --
106.08 0.48 2.88 -0.124 -- 1.03 -- 0.195 -0.0365 -- 1015 765 -- --
108.15 0.488 2.88 -0.173 0.118 -- -0.172 -- -0.0516 12.7 -- -- -- --
108.27 0.487 2.88 -0.18 0.119 -- -- -- -0.0523 13 -- -- -- --
106.08 0.48 2.88 -0.125 -- 0.937 -- -- -0.0358 -- 1015 765 -- --
105.68 0.479 2.87 -- 0.115 0.943 -- -- -0.0196 13 1015 734 -- --
109.15 0.488 2.88 -0.184 -- -- -- -- -0.0546 -- -- -- -- --
109.12 0.489 2.88 -- 0.122 -- -- -- -0.0323 13 -- -- -- --
106.48 0.481 2.87 -- -- 0.999 -- -- -0.0214 -- 1015 748 -- --
110.05 0.49 2.88 -- -- -- -- -- -0.0342 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 96.49 radiation 1.0 90 < th dose independent rect. 10 1
3 96.49 radiation 1.0 90 < th dose dependent rect. 10 1
5 97.16 radiation 40.0 270 > th dose independent rect. 15 1
22 97.16 radiation 40.0 270 > th dose dependent rect. 15 1
39 97.64 wind 1.0 270 < th dose independent rect. 14 1
40 98.83 wind 1.0 270 < th dose dependent rect. 14 1
41 98.93 radiation 1.0 10 < th dose independent rect. 7 5
43 98.93 radiation 1.0 10 < th dose dependent rect. 7 5
45 99.11 radiation 10.0 10 < th dose dependent rect. 10 2
47 99.39 radiation 1.0 10 < th dose independent rect. 11 1
82 99.87 wind 1.0 90 < th dose independent rect. 6 1
83 100.04 radiation 1.0 720 < th dose dependent rect. 7 5
88 100.40 radiation 1.0 720 < th dose independent rect. 7 5
99 101.18 precipitation 0.1 720 > th dose independent rect. 7 3
100 101.18 precipitation 0.1 720 > th dose dependent rect. 7 3
121 101.60 humidity 80.0 90 > th dose independent rect. 11 1
133 101.84 wind 1.0 90 < th dose dependent rect. 6 1
134 101.89 humidity 70.0 10 > th dose dependent rect. 12 1
152 102.15 wind 1.0 90 < th dose independent rect. 6 4
157 102.28 temperature 25.0 30 > th dose dependent rect. 7 1
167 102.52 humidity 90.0 720 > th dose dependent rect. 9 1
194 102.79 humidity 90.0 720 > th dose dependent rect. 7 6
213 102.89 humidity 80.0 720 > th dose independent rect. 11 1
222 102.94 radiation 20.0 10 < th dose independent rect. 12 1
238 103.06 temperature 25.0 10 > th dose independent rect. 17 1
264 103.27 humidity 80.0 30 > th dose independent rect. 11 8
269 103.32 humidity 90.0 720 > th dose independent rect. 9 1
282 103.41 radiation 20.0 10 < th dose independent rect. 10 3
298 103.51 humidity 80.0 10 > th dose independent rect. 17 1
317 103.56 wind 1.0 270 < th dose independent rect. 5 19
382 104.07 wind 1.0 270 < th dose independent sin 23 NA
385 104.08 atmosphere 1005.0 90 > th dose independent rect. 16 2
398 104.14 precipitation 0.1 1440 < th dose independent rect. 5 5
402 104.14 precipitation 0.1 1440 < th dose dependent rect. 5 5
414 104.20 precipitation 0.1 1440 < th dose independent rect. 5 7
417 104.20 precipitation 0.1 1440 < th dose dependent rect. 5 7
434 104.27 radiation 30.0 10 > th dose dependent rect. 8 1
453 104.32 radiation 1.0 1440 > th dose independent rect. 7 5
463 104.34 atmosphere 1005.0 90 > th dose dependent rect. 17 1
474 104.37 precipitation 0.1 1440 < th dose independent rect. 6 2
479 104.37 precipitation 0.1 1440 < th dose dependent rect. 6 2
492 104.40 wind 1.0 270 < th dose dependent sin 22 NA
493 104.42 humidity 80.0 720 < th dose independent rect. 9 3
517 104.47 wind 1.0 270 < th dose dependent rect. 5 19
523 104.49 radiation 1.0 1440 > th dose independent rect. 7 3
541 104.52 wind 1.0 270 < th dose dependent rect. 5 10
556 104.56 atmosphere 1015.0 720 < th dose independent rect. 23 8
600 104.63 wind 1.0 720 > th dose independent rect. 8 7
629 104.67 wind 1.0 1440 < th dose independent rect. 6 1
638 104.68 humidity 70.0 720 > th dose dependent rect. 11 1
659 104.71 precipitation 0.1 1440 > th dose dependent rect. 18 1
663 104.72 humidity 90.0 720 > th dose independent rect. 6 7
671 104.73 temperature 25.0 30 < th dose independent rect. 10 3
710 104.78 temperature 30.0 30 < th dose dependent rect. 12 1
714 104.79 wind 1.0 270 > th dose independent sin 23 NA
727 104.80 precipitation 0.1 4320 < th dose independent rect. 14 2
730 104.80 precipitation 0.1 4320 < th dose dependent rect. 14 2
731 104.80 radiation 20.0 10 < th dose dependent rect. 18 19
737 104.81 precipitation 0.1 1440 < th dose independent rect. 2 10
743 104.81 precipitation 0.1 1440 < th dose dependent rect. 2 10
745 104.82 precipitation 0.1 4320 > th dose independent rect. 14 2
747 104.82 precipitation 0.1 1440 < th dose independent rect. 2 8
749 104.82 precipitation 0.1 4320 > th dose dependent rect. 14 2
751 104.82 precipitation 0.1 1440 < th dose dependent rect. 2 8
755 104.83 atmosphere 1015.0 720 < th dose independent rect. 18 17
800 104.88 wind 1.0 1440 > th dose independent rect. 6 1
813 104.89 precipitation 0.1 1440 > th dose independent rect. 18 1
821 104.90 atmosphere 1005.0 90 > th dose independent rect. 11 1
823 104.90 precipitation 0.1 1440 > th dose independent rect. 2 8
827 104.90 radiation 1.0 10 < th dose dependent rect. 11 7
833 104.91 atmosphere 1005.0 270 > th dose independent rect. 8 4
848 104.92 humidity 70.0 10 > th dose dependent rect. 11 8
862 104.94 precipitation 0.1 1440 > th dose dependent rect. 2 8
864 104.94 precipitation 0.1 1440 > th dose dependent rect. 19 15
909 104.97 radiation 1.0 10 < th dose dependent rect. 17 1
925 104.98 atmosphere 1015.0 720 < th dose independent rect. 23 15
930 104.98 radiation 1.0 10 < th dose dependent rect. 13 5
944 104.99 atmosphere 1015.0 720 < th dose independent rect. 13 17
945 104.99 wind 1.0 270 > th dose independent rect. 9 23
960 105.00 humidity 80.0 30 > th dose independent rect. 11 13
961 105.00 wind 1.0 270 > th dose independent rect. 23 22
968 105.00 temperature 15.0 4320 < th dose dependent rect. 5 15
992 105.02 temperature 15.0 4320 < th dose dependent rect. 14 5