Os01g0694200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0694200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.98 | 0.194 | 10.7 | 0.646 | 0.185 | -0.905 | -0.373 | 1.53 | 0.234 | 23.8 | 20.91 | 708 | -- | -- |
| 18.14 | 0.198 | 10.7 | 0.344 | 0.231 | -0.811 | -0.228 | -- | 0.145 | 1.94 | 18.76 | 842 | -- | -- |
| 17.55 | 0.195 | 10.7 | 0.635 | 0.184 | -0.902 | -- | 1.41 | 0.225 | 23.8 | 20.91 | 707 | -- | -- |
| 18.33 | 0.199 | 10.7 | 0.347 | 0.234 | -0.802 | -- | -- | 0.147 | 1.92 | 19.19 | 851 | -- | -- |
| 18.34 | 0.199 | 10.7 | 0.568 | -- | -0.844 | -- | 1.43 | 0.207 | -- | 20.6 | 405 | -- | -- |
| 31.45 | 0.263 | 10.8 | 0.108 | 0.236 | -- | -0.101 | -- | -0.00615 | 5.3 | -- | -- | -- | -- |
| 31.48 | 0.263 | 10.8 | 0.108 | 0.236 | -- | -- | -- | -0.00563 | 5.42 | -- | -- | -- | -- |
| 19.38 | 0.205 | 10.7 | 0.321 | -- | -0.928 | -- | -- | 0.139 | -- | 16 | 404 | -- | -- |
| 20.97 | 0.213 | 10.8 | -- | 0.221 | -0.661 | -- | -- | 0.0855 | 2.21 | 20.8 | 841 | -- | -- |
| 34.37 | 0.274 | 10.8 | 0.116 | -- | -- | -- | -- | 0.000179 | -- | -- | -- | -- | -- |
| 31.78 | 0.264 | 10.8 | -- | 0.238 | -- | -- | -- | -0.0176 | 5.4 | -- | -- | -- | -- |
| 21.77 | 0.217 | 10.8 | -- | -- | -0.709 | -- | -- | 0.0888 | -- | 19.56 | 408 | -- | -- |
| 34.73 | 0.275 | 10.8 | -- | -- | -- | -- | -- | -0.0127 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.89 | temperature | 20 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 5 | 17.06 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 9 | 17.08 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 11 | 17.11 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 12 | 17.12 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 13 | 17.14 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 19 | 17.19 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 23 |
| 25 | 17.21 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 29 | 17.22 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 46 | 17.37 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 57 | 17.47 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 7 |
| 62 | 17.50 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 12 |
| 65 | 17.51 | temperature | 20 | 1440 | > th | dose dependent | sin | 16 | NA |
| 76 | 17.52 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 225 | 17.81 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 227 | 17.82 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 332 | 17.92 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 435 | 18.02 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 878 | 18.38 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 2 |