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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0694100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Bacterial blight resistance protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.03 (0.0306) R2 : 0.0819
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.411 (0.0644) R2dN8 : 0.106 R2N8 : 0.0819
σ : 0.576
deviance : 152.38
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
139.51 0.555 2.99 0.263 0.265 -0.598 -0.313 7.04 0.462 16 0.4758 400 -- --
145.26 0.561 3.02 0.215 0.251 0.872 -0.423 -- 0.452 16.6 -0.435 59 -- --
139.66 0.55 2.99 0.272 0.267 -0.731 -- 7.56 0.464 15.7 0.5005 396 -- --
141.59 0.554 3.04 0.0389 0.286 0.763 -- -- 0.481 16.5 0.7102 919 -- --
143.37 0.558 2.98 0.264 -- -0.937 -- 8.48 0.457 -- 0.5 394 -- --
146.87 0.568 3.03 0.235 0.273 -- -0.325 -- 0.444 16.4 -- -- -- --
147.16 0.568 3.03 0.232 0.271 -- -- -- 0.443 16.4 -- -- -- --
145.3 0.561 3.03 0.125 -- 0.856 -- -- 0.462 -- 0.6085 885 -- --
140.87 0.553 3.02 -- 0.292 1.01 -- -- 0.458 16.2 0.403 968 -- --
151.09 0.574 3.03 0.221 -- -- -- -- 0.435 -- -- -- -- --
148.58 0.57 3.03 -- 0.266 -- -- -- 0.417 16.5 -- -- -- --
145.42 0.562 3.02 -- -- 0.883 -- -- 0.461 -- 0.4257 889 -- --
152.38 0.576 3.03 -- -- -- -- -- 0.411 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 135.34 radiation 10.0 30 > th dose independent rect. 16 15
2 136.43 radiation 10.0 30 > th dose dependent rect. 17 14
4 137.88 precipitation 0.1 720 < th dose independent rect. 7 22
5 137.88 precipitation 0.1 720 < th dose dependent rect. 7 22
8 138.06 radiation 10.0 10 > th dose independent rect. 6 1
34 138.06 radiation 10.0 10 > th dose dependent rect. 6 1
60 138.51 atmosphere 1005.0 30 > th dose dependent rect. 6 1
61 138.66 precipitation 0.1 720 < th dose independent rect. 2 17
62 138.66 precipitation 0.1 720 < th dose dependent rect. 2 17
63 138.68 wind 3.0 30 < th dose dependent rect. 6 1
70 139.20 humidity 80.0 30 > th dose dependent rect. 6 1
72 139.34 temperature 25.0 270 > th dose independent rect. 17 18
75 139.37 temperature 30.0 30 < th dose dependent rect. 6 1
78 139.48 precipitation 0.1 720 < th dose independent rect. 7 14
79 139.48 precipitation 0.1 720 < th dose dependent rect. 7 14
81 139.49 radiation 10.0 10 < th dose dependent rect. 6 1
82 139.54 radiation 10.0 30 > th dose independent rect. 14 17
85 139.64 precipitation 0.1 1440 < th dose independent rect. 5 1
86 139.64 precipitation 0.1 1440 < th dose dependent rect. 5 1
90 139.75 wind 3.0 30 < th dose independent rect. 6 1
92 139.76 precipitation 0.1 1440 > th dose dependent rect. 5 1
96 139.86 precipitation 0.1 720 < th dose independent rect. 17 17
98 139.86 precipitation 0.1 720 < th dose dependent rect. 17 17
99 139.88 precipitation 0.1 1440 > th dose independent rect. 5 1
101 139.89 wind 9.0 1440 < th dose independent rect. 7 1
102 139.89 temperature 10.0 1440 > th dose independent rect. 7 1
106 139.89 temperature 30.0 1440 < th dose independent rect. 7 1
110 139.89 humidity 50.0 1440 > th dose independent rect. 7 1
115 139.89 atmosphere 995.0 1440 > th dose independent rect. 7 1
116 139.89 atmosphere 1015.0 1440 < th dose independent rect. 7 1
117 139.89 temperature 10.0 1440 > th dose independent rect. 8 23
120 139.90 precipitation 0.1 720 < th dose independent rect. 15 14
121 139.90 precipitation 0.1 720 < th dose dependent rect. 15 14
123 139.93 temperature 20.0 30 > th dose independent rect. 6 1
124 139.94 humidity 90.0 30 < th dose independent rect. 6 1
126 139.97 atmosphere 1005.0 30 > th dose independent rect. 6 1
127 140.03 wind 1.0 30 > th dose independent rect. 6 1
133 140.05 humidity 80.0 30 > th dose independent rect. 6 1
141 140.07 temperature 10.0 30 > th dose independent rect. 6 1
143 140.07 temperature 30.0 30 < th dose independent rect. 6 1
144 140.07 humidity 50.0 30 > th dose independent rect. 6 1
148 140.07 atmosphere 1015.0 30 < th dose independent rect. 6 1
149 140.07 radiation 20.0 30 < th dose independent rect. 6 1
152 140.07 precipitation 0.1 30 < th dose independent rect. 6 1
153 140.07 temperature 10.0 30 > th dose independent rect. 7 23
154 140.07 precipitation 0.1 30 < th dose dependent rect. 6 1
155 140.11 precipitation 0.1 720 < th dose independent rect. 13 16
156 140.11 precipitation 0.1 720 < th dose dependent rect. 13 16
159 140.15 temperature 25.0 270 < th dose independent sin 9 NA
163 140.18 wind 1.0 1440 < th dose independent rect. 9 1
170 140.24 precipitation 0.1 1440 > th dose dependent rect. 18 1
171 140.26 radiation 40.0 1440 < th dose independent rect. 7 1
172 140.28 temperature 10.0 30 > th dose dependent rect. 6 1
174 140.32 wind 9.0 720 < th dose independent rect. 7 22
177 140.34 wind 5.0 10 < th dose independent rect. 8 22
178 140.35 wind 7.0 90 < th dose independent rect. 7 23
179 140.35 wind 3.0 90 > th dose dependent rect. 16 1
180 140.37 wind 5.0 90 > th dose independent rect. 13 9
184 140.41 temperature 25.0 270 > th dose independent sin 9 NA
186 140.41 precipitation 0.1 30 < th dose independent rect. 7 23
187 140.41 radiation 40.0 30 < th dose dependent rect. 6 1
188 140.41 precipitation 0.1 30 < th dose dependent rect. 7 23
194 140.46 wind 5.0 90 > th dose independent rect. 16 1
198 140.47 wind 5.0 10 > th dose dependent rect. 16 12
201 140.49 wind 5.0 10 > th dose dependent rect. 16 10
207 140.51 wind 5.0 10 > th dose independent sin 16 NA
208 140.52 radiation 10.0 30 > th dose independent sin 13 NA
209 140.53 precipitation 0.1 1440 > th dose independent rect. 18 1
210 140.54 wind 1.0 720 > th dose independent rect. 17 2
212 140.55 wind 5.0 10 > th dose dependent rect. 16 7
230 140.63 wind 1.0 1440 > th dose independent rect. 9 1
231 140.64 wind 5.0 90 > th dose independent rect. 13 6
267 140.78 wind 7.0 4320 < th dose independent rect. 10 1
268 140.78 precipitation 0.1 720 < th dose independent rect. 9 10
272 140.78 precipitation 0.1 720 < th dose dependent rect. 9 10
275 140.79 wind 7.0 4320 > th dose independent rect. 10 1
276 140.79 precipitation 0.1 720 < th dose independent rect. 17 2
279 140.79 precipitation 0.1 720 < th dose dependent rect. 17 2
280 140.80 precipitation 0.1 720 < th dose independent sin 1 NA
281 140.80 wind 5.0 10 > th dose independent rect. 16 7
282 140.80 precipitation 0.1 720 < th dose dependent sin 1 NA
284 140.81 temperature 25.0 270 > th dose independent rect. 23 11
285 140.81 wind 7.0 10 > th dose independent rect. 16 13
296 140.85 wind 5.0 10 > th dose independent rect. 14 9
298 140.85 wind 1.0 1440 < th dose dependent rect. 18 1
300 140.86 precipitation 0.1 720 > th dose dependent sin 1 NA
302 140.87 wind 7.0 4320 > th dose dependent rect. 10 1
304 140.87 wind 5.0 10 > th dose dependent rect. 16 2
305 140.88 precipitation 0.1 720 > th dose independent sin 1 NA
309 140.89 radiation 40.0 270 > th dose independent rect. 13 20
310 140.89 precipitation 0.1 720 < th dose independent rect. 23 22
312 140.89 precipitation 0.1 720 < th dose dependent rect. 23 22
320 140.92 precipitation 0.1 720 > th dose dependent rect. 23 21
324 140.94 precipitation 0.1 1440 < th dose independent rect. 19 1
327 140.94 precipitation 0.1 1440 < th dose dependent rect. 19 1
333 140.96 precipitation 0.1 1440 < th dose independent rect. 19 7
335 140.96 precipitation 0.1 1440 < th dose dependent rect. 19 7
336 140.96 radiation 30.0 270 > th dose dependent rect. 13 20
339 140.97 precipitation 0.1 720 < th dose independent rect. 21 23
343 140.97 precipitation 0.1 720 < th dose dependent rect. 21 23
345 140.98 wind 1.0 1440 < th dose independent rect. 18 1
349 140.98 precipitation 0.1 720 > th dose independent rect. 4 15
350 140.98 precipitation 0.1 720 > th dose dependent rect. 4 13
357 141.01 radiation 10.0 30 < th dose independent sin 13 NA
362 141.01 precipitation 0.1 720 > th dose independent rect. 24 20
367 141.02 precipitation 0.1 720 < th dose independent rect. 17 10
370 141.02 precipitation 0.1 720 < th dose dependent rect. 17 10
375 141.04 wind 3.0 270 > th dose independent rect. 3 1
378 141.04 wind 5.0 90 > th dose independent rect. 13 14
380 141.04 temperature 25.0 270 > th dose dependent rect. 17 17
381 141.05 wind 5.0 10 < th dose independent sin 16 NA
384 141.06 wind 5.0 10 > th dose independent rect. 16 2
396 141.08 wind 7.0 720 < th dose independent rect. 17 2
401 141.09 precipitation 0.1 1440 < th dose independent rect. 19 3
405 141.09 precipitation 0.1 1440 < th dose dependent rect. 19 3
409 141.10 precipitation 0.1 720 > th dose independent rect. 4 13
421 141.12 wind 9.0 4320 > th dose independent rect. 7 4
430 141.14 precipitation 0.1 720 < th dose independent rect. 11 8
433 141.14 precipitation 0.1 720 < th dose dependent rect. 11 8
449 141.18 radiation 40.0 270 > th dose independent sin 13 NA
451 141.18 wind 7.0 90 < th dose independent rect. 17 12
452 141.18 temperature 25.0 1440 > th dose independent rect. 21 12
454 141.18 wind 5.0 10 > th dose dependent sin 15 NA
463 141.19 humidity 90.0 90 < th dose dependent rect. 16 1
483 141.22 precipitation 0.1 720 > th dose dependent rect. 5 23
491 141.23 precipitation 0.1 720 > th dose dependent rect. 16 22
502 141.25 precipitation 0.1 720 > th dose dependent rect. 13 19
516 141.26 precipitation 0.1 720 > th dose dependent no NA NA
525 141.27 humidity 90.0 90 < th dose independent rect. 16 1
533 141.27 precipitation 0.1 720 > th dose dependent rect. 3 23
534 141.27 precipitation 0.1 720 > th dose dependent rect. 7 23
557 141.29 precipitation 0.1 720 < th dose independent rect. 15 23
562 141.29 precipitation 0.1 720 < th dose dependent rect. 15 23
563 141.30 temperature 30.0 270 > th dose independent rect. 13 1
573 141.31 wind 5.0 90 > th dose independent sin 17 NA
584 141.32 temperature 25.0 1440 < th dose independent rect. 21 12
595 141.33 wind 5.0 10 > th dose independent rect. 14 6
601 141.34 temperature 20.0 90 > th dose independent rect. 16 1
606 141.34 wind 3.0 90 > th dose dependent rect. 13 9
611 141.35 precipitation 0.1 90 < th dose independent rect. 17 23
612 141.35 precipitation 0.1 90 < th dose dependent rect. 17 23
618 141.36 humidity 90.0 10 < th dose dependent rect. 6 1
629 141.37 wind 1.0 1440 < th dose dependent rect. 9 1
634 141.38 precipitation 0.1 1440 < th dose independent rect. 5 9
637 141.38 precipitation 0.1 1440 < th dose dependent rect. 5 9
638 141.38 precipitation 0.1 720 > th dose dependent rect. 13 15
652 141.40 precipitation 0.1 1440 > th dose independent rect. 5 9
656 141.40 temperature 25.0 90 > th dose dependent sin 9 NA
658 141.40 wind 3.0 90 > th dose dependent rect. 13 5
659 141.40 precipitation 0.1 1440 > th dose dependent rect. 5 9
666 141.41 wind 7.0 10 < th dose independent rect. 18 12
669 141.41 wind 9.0 90 < th dose independent rect. 17 23
670 141.41 atmosphere 1015.0 30 < th dose dependent rect. 6 1
685 141.42 humidity 90.0 720 > th dose dependent rect. 7 17
694 141.43 humidity 90.0 720 > th dose dependent rect. 16 8
699 141.43 wind 9.0 10 < th dose dependent rect. 8 22
701 141.44 wind 5.0 10 > th dose independent rect. 14 4
729 141.47 precipitation 0.1 720 > th dose dependent rect. 19 23
739 141.49 precipitation 0.1 1440 > th dose dependent rect. 13 1
740 141.49 precipitation 0.1 720 > th dose dependent rect. 13 7
792 141.54 radiation 40.0 270 > th dose independent rect. 13 1
796 141.54 precipitation 0.1 1440 > th dose independent rect. 18 7
810 141.55 precipitation 0.1 720 < th dose independent rect. 17 12
813 141.55 precipitation 0.1 1440 > th dose dependent rect. 18 8
815 141.55 precipitation 0.1 720 < th dose dependent rect. 17 12
824 141.57 wind 5.0 90 < th dose independent sin 17 NA
828 141.57 precipitation 0.1 720 > th dose dependent sin 14 NA
874 141.62 wind 5.0 720 < th dose independent rect. 5 2
877 141.62 precipitation 0.1 720 > th dose independent rect. 13 7
905 141.63 humidity 90.0 720 > th dose dependent rect. 13 11
914 141.64 wind 5.0 10 < th dose independent rect. 15 15
918 141.64 humidity 90.0 720 > th dose dependent sin 21 NA
919 141.64 radiation 30.0 270 > th dose dependent sin 13 NA
946 141.66 atmosphere 1010.0 10 < th dose independent rect. 18 22
966 141.67 wind 5.0 10 > th dose dependent rect. 13 15