Os01g0692100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glutathione S-transferase, N-terminal domain containing protein.
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Os01g0692100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glutathione S-transferase, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 201.17 | 0.666 | 7.69 | 1.27 | 3.09 | -5.24 | 2.54 | -1.59 | 0.834 | 6.64 | 0.7793 | 655 | -- | -- |
| 202.15 | 0.662 | 7.7 | 1.27 | 2.86 | -4.97 | 1.3 | -- | 0.819 | 6.63 | 0.8398 | 643 | -- | -- |
| 205.25 | 0.667 | 7.71 | 1.3 | 2.6 | -4.68 | -- | 0.722 | 0.821 | 6.64 | 0.8401 | 632 | -- | -- |
| 206.5 | 0.669 | 7.71 | 1.33 | 2.56 | -4.62 | -- | -- | 0.834 | 6.66 | 0.8539 | 632 | -- | -- |
| 240.44 | 0.722 | 7.73 | 1.31 | -- | -3.5 | -- | 0.168 | 0.826 | -- | 1.202 | 1877 | -- | -- |
| 248.74 | 0.739 | 7.73 | 1.7 | 2.08 | -- | 0.141 | -- | 1.04 | 14.9 | -- | -- | -- | -- |
| 248.8 | 0.739 | 7.73 | 1.7 | 2.08 | -- | -- | -- | 1.04 | 14.9 | -- | -- | -- | -- |
| 235.63 | 0.715 | 7.77 | 1.13 | -- | -3.58 | -- | -- | 0.797 | -- | 0.7192 | 1869 | -- | -- |
| 248.57 | 0.734 | 7.72 | -- | 3.58 | -5.85 | -- | -- | 0.665 | 6.25 | 0.616 | 640 | -- | -- |
| 497.95 | 1.04 | 7.74 | 1.61 | -- | -- | -- | -- | 0.984 | -- | -- | -- | -- | -- |
| 324.96 | 0.843 | 7.77 | -- | 2.04 | -- | -- | -- | 0.848 | 14.9 | -- | -- | -- | -- |
| 266.1 | 0.76 | 7.82 | -- | -- | -3.77 | -- | -- | 0.608 | -- | 0.4877 | 1860 | -- | -- |
| 566.43 | 1.11 | 7.78 | -- | -- | -- | -- | -- | 0.805 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 180.79 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 2 | 181.58 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 3 | 181.63 | radiation | 10 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 7 | 183.06 | humidity | 80 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 31 | 184.38 | humidity | 80 | 43200 | < th | dose independent | rect. | 19 | 15 |
| 62 | 184.74 | radiation | 10 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 71 | 185.04 | humidity | 80 | 43200 | < th | dose dependent | rect. | 19 | 17 |
| 72 | 185.06 | humidity | 80 | 43200 | > th | dose independent | rect. | 19 | 15 |
| 73 | 185.07 | radiation | 30 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 111 | 185.41 | radiation | 20 | 43200 | < th | dose dependent | rect. | 8 | 3 |
| 114 | 185.47 | radiation | 10 | 43200 | > th | dose independent | sin | 9 | NA |
| 117 | 185.51 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 152 | 185.76 | humidity | 80 | 43200 | < th | dose dependent | rect. | 19 | 3 |
| 157 | 185.86 | humidity | 80 | 43200 | < th | dose dependent | sin | 8 | NA |
| 174 | 186.07 | humidity | 80 | 43200 | < th | dose independent | rect. | 3 | 7 |
| 212 | 186.45 | radiation | 20 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 275 | 187.04 | humidity | 80 | 43200 | > th | dose independent | rect. | 2 | 8 |
| 286 | 187.15 | humidity | 70 | 43200 | > th | dose independent | rect. | 19 | 18 |
| 325 | 187.39 | humidity | 70 | 43200 | > th | dose independent | rect. | 2 | 11 |
| 337 | 187.59 | radiation | 1 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 340 | 187.62 | humidity | 80 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 354 | 187.72 | humidity | 70 | 43200 | < th | dose independent | rect. | 1 | 12 |
| 362 | 187.77 | radiation | 20 | 43200 | < th | dose dependent | rect. | 24 | 14 |
| 370 | 187.78 | radiation | 20 | 43200 | < th | dose dependent | rect. | 3 | 11 |
| 442 | 188.06 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 459 | 188.11 | wind | 1 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 507 | 188.26 | radiation | 20 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 580 | 188.48 | radiation | 20 | 43200 | < th | dose dependent | sin | 6 | NA |
| 617 | 188.62 | humidity | 90 | 43200 | < th | dose dependent | rect. | 4 | 6 |
| 638 | 188.65 | wind | 7 | 14400 | < th | dose independent | rect. | 11 | 10 |
| 661 | 188.71 | radiation | 20 | 43200 | > th | dose independent | no | NA | NA |
| 784 | 188.81 | wind | 9 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 828 | 188.94 | humidity | 70 | 43200 | < th | dose independent | sin | 7 | NA |
| 833 | 188.97 | radiation | 20 | 43200 | < th | dose independent | rect. | 8 | 6 |
| 849 | 189.06 | wind | 7 | 14400 | < th | dose independent | rect. | 11 | 14 |
| 883 | 189.12 | wind | 7 | 14400 | < th | dose independent | rect. | 5 | 16 |
| 887 | 189.15 | humidity | 70 | 43200 | > th | dose independent | sin | 7 | NA |
| 902 | 189.21 | wind | 7 | 14400 | < th | dose independent | sin | 18 | NA |
| 904 | 189.22 | radiation | 1 | 43200 | > th | dose dependent | rect. | 9 | 5 |
| 918 | 189.26 | radiation | 40 | 43200 | > th | dose independent | rect. | 14 | 21 |
| 952 | 189.31 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 966 | 189.36 | wind | 1 | 43200 | < th | dose independent | rect. | 4 | 1 |