Os01g0691500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytidylyltransferase domain containing protein.
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Os01g0691500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytidylyltransferase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.03 | 0.305 | 8.89 | -1.44 | 0.17 | -1.37 | -1.07 | 0.0341 | -0.225 | 2.79 | 25.4 | 615 | -- | -- |
| 42.01 | 0.302 | 8.89 | -1.43 | 0.187 | -1.37 | -1.05 | -- | -0.222 | 2.67 | 25.4 | 586 | -- | -- |
| 45.62 | 0.315 | 8.89 | -1.43 | 0.17 | -1.35 | -- | 0.149 | -0.216 | 0.851 | 24.95 | 627 | -- | -- |
| 45.61 | 0.315 | 8.89 | -1.4 | 0.176 | -1.35 | -- | -- | -0.201 | 0.588 | 24.9 | 624 | -- | -- |
| 46.69 | 0.318 | 8.89 | -1.48 | -- | -1.38 | -- | 0.277 | -0.233 | -- | 25.44 | 777 | -- | -- |
| 70.52 | 0.394 | 8.83 | -1.06 | 0.304 | -- | -0.768 | -- | 0.0708 | 0.132 | -- | -- | -- | -- |
| 72.51 | 0.399 | 8.83 | -1.03 | 0.323 | -- | -- | -- | 0.0767 | 22.9 | -- | -- | -- | -- |
| 46.78 | 0.319 | 8.89 | -1.43 | -- | -1.41 | -- | -- | -0.222 | -- | 25.32 | 772 | -- | -- |
| 89.81 | 0.444 | 8.84 | -- | 0.499 | -0.813 | -- | -- | 0.035 | 0.0168 | 27.06 | 243 | -- | -- |
| 78.99 | 0.415 | 8.82 | -1.02 | -- | -- | -- | -- | 0.0788 | -- | -- | -- | -- | -- |
| 100.44 | 0.469 | 8.8 | -- | 0.315 | -- | -- | -- | 0.191 | 22.6 | -- | -- | -- | -- |
| 93.87 | 0.451 | 8.83 | -- | -- | -0.816 | -- | -- | 0.0443 | -- | 25.61 | 671 | -- | -- |
| 106.57 | 0.482 | 8.79 | -- | -- | -- | -- | -- | 0.192 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.75 | temperature | 30 | 270 | < th | dose dependent | rect. | 20 | 21 |
| 4 | 41.08 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 18 |
| 17 | 41.54 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 20 |
| 44 | 41.89 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 70 | 42.20 | temperature | 25 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 83 | 42.35 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 112 | 42.54 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 125 | 42.64 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 134 | 42.70 | temperature | 30 | 10 | < th | dose dependent | rect. | 20 | 22 |
| 163 | 42.86 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 169 | 42.92 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 189 | 43.03 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 213 | 43.17 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 258 | 43.51 | temperature | 25 | 720 | < th | dose dependent | sin | 11 | NA |
| 307 | 44.00 | temperature | 30 | 270 | < th | dose dependent | sin | 8 | NA |
| 321 | 44.07 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 339 | 44.16 | temperature | 30 | 10 | < th | dose dependent | rect. | 20 | 18 |
| 391 | 44.52 | temperature | 30 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 417 | 44.64 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 498 | 45.11 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 506 | 45.14 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 515 | 45.20 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 23 |
| 654 | 45.91 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 695 | 46.13 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 731 | 46.24 | temperature | 10 | 720 | > th | dose dependent | sin | 11 | NA |
| 743 | 46.27 | temperature | 10 | 270 | > th | dose dependent | sin | 8 | NA |
| 765 | 46.34 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 829 | 46.60 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 22 |
| 840 | 46.65 | temperature | 25 | 720 | < th | dose dependent | sin | 3 | NA |
| 845 | 46.66 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 846 | 46.66 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 4 |
| 848 | 46.66 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 902 | 46.85 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 987 | 47.05 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |