Os01g0691200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0691200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 331.26 | 0.855 | 3.62 | 0.362 | 0.124 | -1.02 | 0.482 | 0.122 | -0.0742 | 3.92 | 21.8 | 541 | -- | -- |
| 331.31 | 0.848 | 3.62 | 0.326 | 0.124 | -1.03 | 0.443 | -- | -0.0823 | 3.75 | 21.74 | 540 | -- | -- |
| 331.9 | 0.849 | 3.62 | 0.338 | 0.125 | -1.03 | -- | 0.0488 | -0.0858 | 3.74 | 21.8 | 540 | -- | -- |
| 331.89 | 0.848 | 3.62 | 0.321 | 0.126 | -1.03 | -- | -- | -0.084 | 3.64 | 21.79 | 540 | -- | -- |
| 332.73 | 0.85 | 3.62 | 0.33 | -- | -1.04 | -- | 0.0077 | -0.0773 | -- | 21.78 | 529 | -- | -- |
| 378.02 | 0.911 | 3.69 | -0.0458 | 0.277 | -- | 0.402 | -- | -0.398 | 5.75 | -- | -- | -- | -- |
| 378.38 | 0.911 | 3.69 | -0.0426 | 0.28 | -- | -- | -- | -0.4 | 6.08 | -- | -- | -- | -- |
| 332.69 | 0.85 | 3.62 | 0.322 | -- | -1.03 | -- | -- | -0.0806 | -- | 21.77 | 501 | -- | -- |
| 334.35 | 0.852 | 3.63 | -- | 0.135 | -0.958 | -- | -- | -0.134 | 3.67 | 21.88 | 540 | -- | -- |
| 382.45 | 0.914 | 3.69 | -0.0346 | -- | -- | -- | -- | -0.394 | -- | -- | -- | -- | -- |
| 378.42 | 0.91 | 3.69 | -- | 0.28 | -- | -- | -- | -0.395 | 6.09 | -- | -- | -- | -- |
| 335.23 | 0.853 | 3.63 | -- | -- | -0.971 | -- | -- | -0.133 | -- | 21.75 | 485 | -- | -- |
| 382.48 | 0.913 | 3.69 | -- | -- | -- | -- | -- | -0.39 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 330.32 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 23 | 21 |
| 8 | 332.89 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 12 |
| 9 | 333.00 | temperature | 10.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 12 | 333.20 | temperature | 30.0 | 270 | < th | dose dependent | sin | 7 | NA |
| 37 | 336.67 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 18 | 22 |
| 43 | 336.92 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 63 | 337.59 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 6 | 22 |
| 69 | 337.72 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 95 | 338.26 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 120 | 338.76 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 123 | 338.78 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 21 | 16 |
| 128 | 338.85 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 9 | 4 |
| 133 | 338.91 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 143 | 338.99 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 20 | 18 |
| 169 | 339.36 | wind | 9.0 | 14400 | < th | dose independent | rect. | 2 | 11 |
| 189 | 339.52 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 8 |
| 197 | 339.57 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 218 | 339.81 | wind | 9.0 | 14400 | < th | dose independent | rect. | 23 | 14 |
| 223 | 339.85 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 6 |
| 256 | 340.19 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 16 | 13 |
| 259 | 340.21 | wind | 9.0 | 14400 | < th | dose independent | rect. | 9 | 4 |
| 267 | 340.32 | wind | 7.0 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 272 | 340.37 | temperature | 25.0 | 720 | < th | dose dependent | sin | 13 | NA |
| 318 | 340.77 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 3 |
| 330 | 340.89 | wind | 9.0 | 14400 | > th | dose independent | rect. | 23 | 14 |
| 351 | 341.06 | wind | 7.0 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 494 | 342.54 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 23 | 14 |
| 504 | 342.62 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 541 | 342.95 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 557 | 343.02 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 594 | 343.40 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 624 | 343.65 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 21 |
| 684 | 344.00 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 705 | 344.19 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 707 | 344.21 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 708 | 344.21 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 915 | 344.98 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 23 | 5 |