Os01g0690600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Receptor serine/threonine kinase PR5K.
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Os01g0690600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Receptor serine/threonine kinase PR5K.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 161.39 | 0.597 | 3.02 | 0.505 | 0.105 | 2 | 0.372 | 4.03 | 0.0693 | 6.47 | 20.65 | 5103 | -- | -- |
| 167.3 | 0.602 | 2.91 | 0.558 | 0.0893 | 0.483 | 0.4 | -- | 0.104 | 5.72 | 33.1 | 6496 | -- | -- |
| 161.64 | 0.592 | 3.02 | 0.478 | 0.104 | 1.98 | -- | 4.03 | 0.0621 | 7.46 | 20.67 | 5116 | -- | -- |
| 166.69 | 0.601 | 2.91 | 0.541 | 0.125 | 0.49 | -- | -- | 0.0749 | 7.81 | 54.82 | 4149 | -- | -- |
| 162.16 | 0.593 | 3.05 | 0.574 | -- | 2.84 | -- | 5.8 | 0.0602 | -- | 19.47 | 5049 | -- | -- |
| 170.96 | 0.613 | 2.94 | 0.31 | 0.126 | -- | 0.261 | -- | -0.0219 | 7.7 | -- | -- | -- | -- |
| 171.07 | 0.612 | 2.94 | 0.318 | 0.128 | -- | -- | -- | -0.0214 | 8.8 | -- | -- | -- | -- |
| 167.35 | 0.603 | 2.92 | 0.537 | -- | 0.515 | -- | -- | 0.0789 | -- | 57.02 | 3673 | -- | -- |
| 172.28 | 0.611 | 2.94 | -- | 0.107 | 0.259 | -- | -- | -0.0159 | 8 | 42.12 | 2210 | -- | -- |
| 172 | 0.613 | 2.94 | 0.318 | -- | -- | -- | -- | -0.0205 | -- | -- | -- | -- | -- |
| 173.73 | 0.617 | 2.94 | -- | 0.129 | -- | -- | -- | -0.0568 | 8.61 | -- | -- | -- | -- |
| 172.87 | 0.612 | 2.94 | -- | -- | 0.286 | -- | -- | -0.011 | -- | 44.32 | 2142 | -- | -- |
| 174.67 | 0.617 | 2.95 | -- | -- | -- | -- | -- | -0.0557 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 155.94 | humidity | 50 | 90 | < th | dose dependent | rect. | 11 | 3 |
| 22 | 155.97 | humidity | 50 | 30 | < th | dose independent | rect. | 12 | 2 |
| 26 | 156.05 | humidity | 50 | 90 | < th | dose independent | rect. | 10 | 4 |
| 346 | 158.59 | humidity | 50 | 90 | < th | dose dependent | sin | 7 | NA |
| 348 | 159.09 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 1 |
| 373 | 159.74 | humidity | 50 | 10 | < th | dose dependent | sin | 12 | NA |
| 377 | 160.11 | humidity | 50 | 10 | < th | dose independent | sin | 13 | NA |
| 380 | 160.39 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 1 |
| 383 | 160.59 | temperature | 20 | 720 | < th | dose independent | rect. | 4 | 16 |
| 387 | 160.74 | temperature | 20 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 393 | 160.89 | temperature | 20 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 397 | 160.90 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 4 |
| 409 | 161.12 | humidity | 50 | 10 | > th | dose independent | sin | 13 | NA |
| 412 | 161.15 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 7 |
| 430 | 161.29 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 15 |
| 443 | 161.44 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 8 |
| 445 | 161.45 | temperature | 20 | 720 | < th | dose independent | rect. | 4 | 6 |
| 460 | 161.51 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 8 |
| 469 | 161.54 | humidity | 50 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 545 | 161.76 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 548 | 161.78 | temperature | 20 | 4320 | < th | dose independent | rect. | 15 | 16 |
| 567 | 161.79 | temperature | 20 | 4320 | > th | dose independent | rect. | 14 | 17 |
| 587 | 161.81 | temperature | 20 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 624 | 161.96 | temperature | 20 | 4320 | > th | dose independent | sin | 9 | NA |
| 638 | 161.99 | temperature | 20 | 4320 | < th | dose independent | sin | 9 | NA |
| 707 | 162.13 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 5 |
| 709 | 162.14 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 18 |
| 712 | 162.15 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 17 | 3 |
| 730 | 162.17 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 19 |
| 824 | 162.26 | humidity | 50 | 4320 | < th | dose dependent | rect. | 14 | 2 |
| 825 | 162.26 | temperature | 20 | 4320 | < th | dose dependent | rect. | 21 | 9 |
| 866 | 162.29 | temperature | 20 | 4320 | < th | dose dependent | rect. | 14 | 16 |
| 947 | 162.38 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 998 | 162.42 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 10 | 1 |