Os01g0690200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0690200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 148.19 | 0.572 | 7.35 | 2.84 | 1.35 | -0.84 | 0.56 | 2.5 | 0.577 | 6.22 | 22.4 | 1265 | -- | -- |
| 164.24 | 0.597 | 7.41 | 2.3 | 1.39 | -1.02 | 0.146 | -- | 0.478 | 6.22 | 21.38 | 2463 | -- | -- |
| 148.79 | 0.568 | 7.35 | 2.9 | 1.35 | -0.839 | -- | 2.63 | 0.587 | 6.29 | 22.35 | 1373 | -- | -- |
| 163.71 | 0.596 | 7.43 | 2.25 | 1.32 | -1.04 | -- | -- | 0.398 | 6.16 | 21.35 | 2451 | -- | -- |
| 238.78 | 0.72 | 7.44 | 2.77 | -- | -0.895 | -- | 2.23 | 0.495 | -- | 22.6 | 643 | -- | -- |
| 191.63 | 0.649 | 7.5 | 1.71 | 1.33 | -- | 0.59 | -- | 0.0845 | 6.42 | -- | -- | -- | -- |
| 192.49 | 0.65 | 7.5 | 1.72 | 1.33 | -- | -- | -- | 0.0827 | 6.43 | -- | -- | -- | -- |
| 220.82 | 0.692 | 7.45 | 2.82 | -- | -1.07 | -- | -- | 0.5 | -- | 25.2 | 330 | -- | -- |
| 261.83 | 0.754 | 7.51 | -- | 1.34 | -0.438 | -- | -- | 0.04 | 6.08 | 22.4 | 900 | -- | -- |
| 285.1 | 0.789 | 7.53 | 1.76 | -- | -- | -- | -- | 0.111 | -- | -- | -- | -- | -- |
| 270.66 | 0.77 | 7.54 | -- | 1.36 | -- | -- | -- | -0.109 | 6.36 | -- | -- | -- | -- |
| 308.87 | 0.819 | 7.57 | -- | -- | -1.19 | -- | -- | 0.0462 | -- | 28.4 | 488 | -- | -- |
| 366.46 | 0.894 | 7.57 | -- | -- | -- | -- | -- | -0.084 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 144.95 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 22 | 3 |
| 9 | 145.57 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 22 | 4 |
| 12 | 145.75 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 21 | 145.88 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 21 | 9 |
| 55 | 146.81 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 71 | 147.10 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 78 | 147.15 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 103 | 147.52 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 1 | 3 |
| 144 | 148.00 | temperature | 20.0 | 1440 | > th | dose independent | sin | 11 | NA |
| 173 | 148.19 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 181 | 148.30 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 187 | 148.36 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 22 | 5 |
| 198 | 148.45 | temperature | 20.0 | 1440 | < th | dose independent | sin | 11 | NA |
| 201 | 148.46 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 236 | 148.79 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 4 | 8 |
| 243 | 148.84 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 21 | 7 |
| 256 | 148.93 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 281 | 149.16 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 300 | 149.26 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 343 | 149.54 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 375 | 149.69 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 7 | 4 |
| 386 | 149.79 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 6 | 4 |
| 387 | 149.81 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 392 | 149.82 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 4 | 9 |
| 398 | 149.86 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 5 | 7 |
| 404 | 149.89 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 5 | 7 |
| 472 | 150.14 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 11 |
| 504 | 150.28 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 18 | 10 |
| 519 | 150.35 | humidity | 90.0 | 43200 | < th | dose independent | sin | 1 | NA |
| 548 | 150.44 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 14 |
| 550 | 150.45 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 21 | 6 |
| 552 | 150.45 | temperature | 20.0 | 720 | > th | dose independent | rect. | 15 | 18 |
| 555 | 150.46 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 20 | 8 |
| 606 | 150.61 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 14 |
| 612 | 150.65 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 12 | NA |
| 652 | 150.77 | humidity | 90.0 | 43200 | > th | dose independent | sin | 1 | NA |
| 769 | 151.11 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 789 | 151.16 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 801 | 151.19 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 11 |
| 842 | 151.31 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 14 | 2 |
| 927 | 151.52 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 930 | 151.52 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 15 | 19 |
| 955 | 151.57 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 10 | NA |
| 957 | 151.58 | humidity | 90.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 958 | 151.58 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 962 | 151.58 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 988 | 151.62 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 6 |