Os01g0689600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0689600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68.07 | 0.388 | 7.48 | 0.326 | 0.142 | 0.901 | 0.474 | 2.22 | -0.328 | 11.1 | 6.795 | 5733 | -- | -- |
| 72.45 | 0.396 | 7.39 | 0.19 | 0.157 | 0.572 | 0.433 | -- | -0.24 | 10.4 | 7.247 | 5555 | -- | -- |
| 68.98 | 0.387 | 7.48 | 0.35 | 0.144 | 0.913 | -- | 2.21 | -0.324 | 11.6 | 6.7 | 5721 | -- | -- |
| 73.11 | 0.398 | 7.4 | 0.178 | 0.133 | 0.582 | -- | -- | -0.236 | 10.2 | 6.811 | 5553 | -- | -- |
| 70.23 | 0.39 | 7.48 | 0.334 | -- | 0.894 | -- | 2.18 | -0.322 | -- | 6.703 | 5721 | -- | -- |
| 77.77 | 0.413 | 7.36 | -0.0951 | 0.132 | -- | 0.5 | -- | -0.0868 | 11.1 | -- | -- | -- | -- |
| 78.82 | 0.416 | 7.36 | -0.0742 | 0.13 | -- | -- | -- | -0.0846 | 11.6 | -- | -- | -- | -- |
| 74.11 | 0.401 | 7.39 | 0.182 | -- | 0.559 | -- | -- | -0.211 | -- | 6.694 | 5718 | -- | -- |
| 73.49 | 0.399 | 7.38 | -- | 0.141 | 0.481 | -- | -- | -0.196 | 11.4 | 6.423 | 5556 | -- | -- |
| 79.89 | 0.418 | 7.36 | -0.0778 | -- | -- | -- | -- | -0.0861 | -- | -- | -- | -- | -- |
| 78.97 | 0.416 | 7.35 | -- | 0.131 | -- | -- | -- | -0.0764 | 11.7 | -- | -- | -- | -- |
| 74.22 | 0.401 | 7.36 | -- | -- | 0.484 | -- | -- | -0.0832 | -- | 6.672 | 4397 | -- | -- |
| 80.05 | 0.418 | 7.36 | -- | -- | -- | -- | -- | -0.0775 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.78 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 14 | 17 |
| 2 | 65.79 | wind | 9.0 | 43200 | > th | dose independent | rect. | 14 | 17 |
| 3 | 65.81 | wind | 9.0 | 43200 | < th | dose independent | rect. | 14 | 17 |
| 5 | 65.81 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 5 |
| 7 | 65.82 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 22 |
| 18 | 65.89 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 20 | 65.91 | wind | 9.0 | 43200 | < th | dose independent | sin | 14 | NA |
| 31 | 65.96 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 22 |
| 36 | 65.97 | wind | 9.0 | 43200 | < th | dose independent | rect. | 4 | 19 |
| 39 | 65.97 | wind | 7.0 | 43200 | > th | dose independent | rect. | 17 | 22 |
| 41 | 65.98 | wind | 9.0 | 43200 | < th | dose independent | rect. | 9 | 17 |
| 42 | 65.98 | wind | 7.0 | 43200 | > th | dose independent | rect. | 19 | 21 |
| 44 | 65.99 | wind | 9.0 | 43200 | < th | dose independent | rect. | 9 | 15 |
| 46 | 65.99 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 22 |
| 54 | 66.01 | wind | 9.0 | 43200 | > th | dose independent | sin | 14 | NA |
| 73 | 66.02 | wind | 7.0 | 43200 | < th | dose independent | rect. | 17 | 22 |
| 74 | 66.02 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 9 | 21 |
| 103 | 66.06 | wind | 9.0 | 43200 | < th | dose independent | no | NA | NA |
| 104 | 66.06 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 5 | 6 |
| 168 | 66.12 | wind | 5.0 | 43200 | < th | dose independent | rect. | 17 | 14 |
| 173 | 66.12 | wind | 9.0 | 43200 | < th | dose independent | rect. | 14 | 23 |
| 185 | 66.13 | wind | 5.0 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 195 | 66.13 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 198 | 66.13 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 17 | 23 |
| 199 | 66.13 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 19 | 23 |
| 209 | 66.15 | wind | 5.0 | 43200 | > th | dose independent | rect. | 17 | 14 |
| 211 | 66.15 | wind | 9.0 | 43200 | > th | dose independent | rect. | 4 | 19 |
| 213 | 66.15 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 215 | 66.16 | wind | 9.0 | 43200 | > th | dose independent | rect. | 9 | 16 |
| 221 | 66.16 | wind | 7.0 | 43200 | > th | dose dependent | sin | 13 | NA |
| 232 | 66.17 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 15 | 23 |
| 244 | 66.19 | radiation | 10.0 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 272 | 66.19 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 3 | 20 |
| 274 | 66.19 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 3 | 23 |
| 282 | 66.20 | wind | 9.0 | 43200 | > th | dose dependent | sin | 17 | NA |
| 297 | 66.21 | wind | 7.0 | 43200 | > th | dose dependent | no | NA | NA |
| 307 | 66.22 | wind | 7.0 | 43200 | > th | dose independent | rect. | 3 | 13 |
| 322 | 66.22 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 10 | 13 |
| 331 | 66.23 | radiation | 10.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 342 | 66.24 | wind | 9.0 | 43200 | > th | dose independent | no | NA | NA |
| 358 | 66.25 | wind | 7.0 | 43200 | < th | dose independent | rect. | 3 | 13 |
| 360 | 66.25 | wind | 7.0 | 43200 | < th | dose independent | rect. | 24 | 16 |
| 371 | 66.25 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 389 | 66.27 | wind | 9.0 | 43200 | < th | dose independent | sin | 22 | NA |
| 391 | 66.27 | wind | 7.0 | 43200 | > th | dose independent | rect. | 4 | 11 |
| 438 | 66.30 | wind | 7.0 | 43200 | > th | dose independent | sin | 3 | NA |
| 453 | 66.31 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 454 | 66.31 | wind | 5.0 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 460 | 66.31 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 461 | 66.31 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 9 | 6 |
| 470 | 66.32 | wind | 7.0 | 43200 | < th | dose independent | rect. | 4 | 11 |
| 518 | 66.35 | wind | 7.0 | 43200 | < th | dose independent | sin | 3 | NA |
| 541 | 66.37 | wind | 9.0 | 43200 | < th | dose independent | rect. | 8 | 10 |
| 569 | 66.38 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 16 | 17 |
| 611 | 66.41 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 629 | 66.42 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 630 | 66.42 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 10 | 8 |
| 672 | 66.46 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 673 | 66.46 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 5 |
| 678 | 66.46 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 5 |
| 696 | 66.47 | wind | 7.0 | 43200 | > th | dose dependent | sin | 23 | NA |
| 713 | 66.49 | wind | 9.0 | 43200 | > th | dose independent | sin | 22 | NA |
| 758 | 66.51 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 6 | 3 |
| 788 | 66.52 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 21 | 12 |
| 790 | 66.52 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 18 | 15 |
| 804 | 66.52 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 806 | 66.52 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 3 | 15 |
| 808 | 66.52 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 1 | 17 |
| 813 | 66.53 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 2 | 7 |
| 875 | 66.56 | wind | 9.0 | 43200 | > th | dose independent | rect. | 8 | 10 |
| 967 | 66.61 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 4 | 12 |
| 986 | 66.63 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 5 | 9 |