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Os01g0689300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11 (0.022) R2 : 0.563
β1 : 1.51 (0.0823) R2dD : 0.357 R2D : 0.0535
β2 : -- (--) R2dC : -- R2C : --
β3 : -2.06 (0.108) R2dE : 0.395 R2E : 0.0571
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.647 (0.0485) R2dN8 : 0.249 R2N8 : -0.0422
σ : 0.407
deviance : 76.25
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_____
C
peak time of C : --
E
wheather : temperature
threshold : 14.2
memory length : 113
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
68.12 0.388 11 1.93 0.325 -1.49 0.261 2.87 0.736 1.68 19.21 220 -- --
72.83 0.397 11 1.4 0.384 -1.53 -0.249 -- 0.577 2.11 15.79 214 -- --
68.27 0.385 11 1.92 0.344 -1.51 -- 2.74 0.734 1.14 18.95 250 -- --
72.9 0.398 11 1.43 0.346 -1.66 -- -- 0.586 1.7 14.28 226 -- --
71.89 0.395 11 1.89 -- -1.75 -- 2.5 0.76 -- 19.47 121 -- --
102.3 0.474 11.1 1.07 0.782 -- -0.0959 -- 0.355 3.22 -- -- -- --
102.33 0.474 11.1 1.08 0.781 -- -- -- 0.356 3.23 -- -- -- --
76.25 0.407 11 1.51 -- -2.06 -- -- 0.647 -- 14.2 113 -- --
121.49 0.516 11.1 -- 0.524 -1.03 -- -- 0.359 3.75 13.67 211 -- --
136.94 0.547 11.1 1.11 -- -- -- -- 0.376 -- -- -- -- --
132.9 0.539 11.1 -- 0.802 -- -- -- 0.236 3.23 -- -- -- --
132.35 0.536 11.1 -- -- -1.55 -- -- 0.426 -- 12.56 95 -- --
169.45 0.608 11.1 -- -- -- -- -- 0.253 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 64.19 wind 9 43200 > th dose dependent rect. 18 11
3 64.26 wind 9 43200 > th dose dependent rect. 18 7
5 64.33 wind 9 43200 > th dose dependent rect. 18 9
8 64.93 wind 9 43200 > th dose dependent rect. 19 2
9 65.08 wind 9 43200 > th dose independent rect. 18 7
13 65.28 wind 9 43200 > th dose independent rect. 18 9
14 65.34 wind 9 43200 > th dose independent rect. 19 2
16 65.35 radiation 1 14400 < th dose independent rect. 18 11
25 65.79 wind 9 43200 < th dose independent rect. 18 3
28 65.88 radiation 1 14400 < th dose independent rect. 18 4
30 65.90 radiation 1 14400 < th dose independent rect. 18 6
34 65.93 radiation 1 14400 < th dose independent rect. 18 8
36 65.96 wind 9 43200 < th dose independent rect. 18 9
39 65.97 wind 9 43200 < th dose independent rect. 18 7
46 66.29 temperature 20 270 > th dose dependent rect. 16 23
63 66.57 radiation 1 14400 > th dose independent rect. 17 2
94 66.81 temperature 30 270 < th dose dependent rect. 22 23
121 67.51 temperature 20 720 > th dose dependent rect. 21 16
133 67.88 temperature 20 720 > th dose dependent sin 6 NA
138 67.97 temperature 15 720 > th dose dependent rect. 23 16
149 68.14 temperature 20 270 > th dose dependent rect. 23 23
152 68.18 temperature 20 270 > th dose dependent rect. 3 23
158 68.30 temperature 20 270 > th dose dependent rect. 6 23
169 68.41 temperature 20 270 > th dose dependent no NA NA
184 68.62 atmosphere 995 43200 < th dose independent rect. 13 2
187 68.66 atmosphere 995 43200 < th dose independent rect. 8 8
191 68.67 radiation 1 14400 < th dose dependent rect. 17 3
201 68.70 atmosphere 995 43200 > th dose independent rect. 8 8
217 68.73 temperature 20 270 > th dose dependent rect. 21 23
224 68.79 atmosphere 995 43200 > th dose independent rect. 11 4
225 68.79 radiation 1 14400 < th dose dependent rect. 17 11
227 68.80 temperature 15 720 > th dose dependent rect. 23 19
241 68.90 atmosphere 995 43200 < th dose dependent rect. 14 2
306 69.24 temperature 20 1440 > th dose dependent rect. 18 1
379 69.48 temperature 20 1440 > th dose dependent rect. 17 4
425 69.59 temperature 30 270 < th dose dependent no NA NA
453 69.66 wind 7 43200 > th dose independent rect. 6 1
469 69.72 radiation 1 14400 < th dose independent sin 13 NA
495 69.80 radiation 1 14400 < th dose dependent rect. 3 3
529 69.94 temperature 30 1440 < th dose dependent rect. 17 2
540 69.96 radiation 1 14400 < th dose dependent rect. 21 9
568 70.04 temperature 30 720 < th dose dependent rect. 22 19
587 70.10 temperature 30 270 < th dose dependent rect. 13 23
618 70.18 radiation 1 14400 < th dose dependent sin 13 NA
646 70.24 wind 1 43200 > th dose dependent rect. 20 1
649 70.26 wind 9 43200 > th dose dependent sin 13 NA
656 70.28 radiation 1 14400 > th dose independent sin 13 NA
673 70.32 wind 3 43200 > th dose dependent rect. 5 16
691 70.36 temperature 30 270 < th dose dependent rect. 11 23
703 70.39 wind 5 43200 < th dose independent rect. 5 16
707 70.40 wind 5 43200 > th dose independent rect. 5 16
737 70.47 temperature 30 1440 < th dose dependent rect. 17 4
764 70.51 temperature 10 720 > th dose dependent rect. 12 23
767 70.52 wind 9 43200 < th dose dependent rect. 20 1
819 70.60 wind 5 43200 > th dose dependent rect. 14 20
909 70.74 wind 5 43200 < th dose independent rect. 5 20
944 70.77 radiation 1 14400 > th dose dependent rect. 18 1
966 70.78 temperature 20 1440 > th dose dependent rect. 15 19
968 70.79 atmosphere 995 43200 < th dose independent sin 23 NA
971 70.79 wind 5 43200 > th dose independent rect. 5 20