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Os01g0686200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.3 (0.0296) R2 : 0.793
β1 : 1.89 (0.109) R2dD : 0.139 R2D : 0.0966
β2 : 3.22 (0.0888) R2dC : 0.873 R2C : 0.523
β3 : 0.966 (0.0698) R2dE : 0.125 R2E : -0.263
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.543 (0.0634) R2dN8 : 0.0438 R2N8 : 0.0247
σ : 0.554
deviance : 141.25
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_____
C
peak time of C : 3.23
E
wheather : atmosphere
threshold : 1000
memory length : 120
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 3.3
open length of G : 16

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
135.42 0.547 10.3 1.87 3.04 0.839 0.817 1.46 0.549 3.25 1000 100 3.05 15.9
142.74 0.556 10.3 1.95 3.21 0.965 0.332 -- 0.56 3.22 1000 124 3.23 16.1
137.09 0.545 10.3 1.85 3.06 0.847 -- 1.36 0.565 3.24 1000 109 3.07 15.9
141.25 0.554 10.3 1.89 3.22 0.966 -- -- 0.543 3.23 1000 120 3.3 16
188.84 0.64 10.4 2.14 -- -2.24 -- 0.266 0.524 -- 990.4 509 3.23 18.6
177.49 0.625 10.3 1.78 2.69 -- 0.329 -- 0.604 4.14 -- -- -- --
177.79 0.624 10.3 1.78 2.69 -- -- -- 0.602 4.12 -- -- -- --
171.5 0.61 10.4 1.8 -- -2.48 -- -- 0.545 -- 994.5 561 3.16 17.4
231.39 0.708 10.4 -- 3.19 0.837 -- -- 0.349 3.27 1000 71 3.61 16
571.07 1.12 10.3 1.88 -- -- -- -- 0.674 -- -- -- -- --
260.86 0.756 10.3 -- 2.73 -- -- -- 0.405 4.11 -- -- -- --
251.4 0.738 10.4 -- -- -2.48 -- -- 0.391 -- 994.5 554 3.25 17.4
664.72 1.2 10.3 -- -- -- -- -- 0.465 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 136.49 atmosphere 1000.0 90 > th dose independent rect. 3 16
5 140.75 wind 9.0 270 < th dose independent rect. 6 8
6 140.82 humidity 50.0 270 > th dose independent rect. 6 8
9 140.94 radiation 1.0 270 < th dose independent rect. 9 17
11 141.03 radiation 1.0 270 < th dose dependent rect. 9 17
13 141.07 temperature 10.0 270 > th dose independent rect. 6 8
14 141.07 atmosphere 995.0 270 > th dose independent rect. 6 8
15 141.07 atmosphere 1015.0 270 < th dose independent rect. 6 8
16 141.07 temperature 10.0 270 > th dose independent rect. 14 16
20 141.14 precipitation 0.1 270 < th dose independent rect. 6 8
21 141.14 precipitation 0.1 270 < th dose dependent rect. 6 8
28 141.37 precipitation 0.1 270 < th dose independent rect. 14 16
29 141.37 precipitation 0.1 270 < th dose dependent rect. 14 16
32 141.51 humidity 60.0 270 > th dose independent rect. 17 9
33 141.55 radiation 10.0 270 < th dose dependent rect. 17 9
51 142.27 radiation 20.0 270 < th dose dependent rect. 1 8
56 142.49 wind 9.0 270 < th dose independent rect. 14 16
58 142.55 atmosphere 995.0 270 > th dose independent rect. 14 16
60 142.66 radiation 1.0 270 < th dose independent rect. 17 9
77 143.13 radiation 40.0 10 < th dose dependent rect. 16 17
99 143.36 wind 7.0 270 < th dose independent rect. 17 9
101 143.39 temperature 30.0 270 < th dose independent rect. 17 9
106 143.44 precipitation 0.1 90 < th dose independent rect. 16 15
107 143.44 precipitation 0.1 90 < th dose dependent rect. 16 15
114 143.49 atmosphere 1015.0 270 < th dose independent rect. 18 8
123 143.56 radiation 40.0 270 < th dose independent rect. 15 15
130 143.73 precipitation 0.1 270 < th dose independent rect. 2 16
131 143.73 precipitation 0.1 270 < th dose dependent rect. 2 16
146 143.94 temperature 15.0 270 > th dose independent rect. 2 16
160 144.04 radiation 20.0 10 < th dose independent rect. 16 16
162 144.06 temperature 10.0 270 > th dose independent rect. 18 8
168 144.06 atmosphere 1015.0 270 < th dose independent rect. 2 16
170 144.11 wind 1.0 270 > th dose independent rect. 14 16
191 144.40 radiation 1.0 270 > th dose independent rect. 4 10
210 144.55 radiation 1.0 270 < th dose independent rect. 2 6
211 144.58 wind 9.0 90 < th dose independent rect. 16 15
219 144.74 atmosphere 995.0 270 > th dose independent rect. 18 8
222 144.74 radiation 40.0 90 < th dose dependent rect. 3 8
227 144.81 radiation 40.0 90 < th dose independent rect. 3 16
240 144.97 radiation 20.0 270 < th dose independent rect. 1 8
254 145.10 precipitation 0.1 270 < th dose independent rect. 18 8
255 145.10 precipitation 0.1 270 < th dose dependent rect. 18 8
283 145.34 wind 1.0 90 > th dose independent rect. 7 9
290 145.41 humidity 50.0 270 > th dose dependent rect. 17 8
298 145.48 wind 9.0 270 < th dose independent rect. 2 15
301 145.50 humidity 50.0 10 > th dose independent rect. 8 8
336 145.88 atmosphere 995.0 90 > th dose dependent rect. 3 16
373 146.04 temperature 15.0 10 > th dose independent rect. 16 16
391 146.18 atmosphere 995.0 10 > th dose independent rect. 8 8
393 146.20 temperature 10.0 270 > th dose dependent rect. 18 7
399 146.30 radiation 10.0 270 < th dose dependent sin 6 NA
433 146.54 temperature 10.0 10 > th dose independent rect. 8 8
435 146.54 atmosphere 1015.0 10 < th dose independent rect. 8 8
436 146.54 precipitation 0.1 10 < th dose independent rect. 8 8
438 146.54 precipitation 0.1 10 < th dose dependent rect. 8 8
446 146.60 radiation 20.0 90 < th dose independent rect. 3 8
455 146.66 atmosphere 1015.0 270 < th dose independent rect. 6 19
464 146.73 radiation 10.0 1440 < th dose dependent rect. 20 9
467 146.76 wind 9.0 270 < th dose independent rect. 5 22
483 146.84 wind 7.0 270 < th dose independent rect. 6 19
529 147.08 wind 9.0 10 < th dose independent rect. 8 8
540 147.14 precipitation 0.1 10 < th dose independent rect. 16 16
542 147.14 precipitation 0.1 10 < th dose dependent rect. 16 16
547 147.17 humidity 50.0 270 > th dose independent rect. 6 20
557 147.24 radiation 1.0 270 < th dose independent sin 4 NA
562 147.26 radiation 10.0 1440 < th dose independent rect. 20 9
569 147.29 radiation 20.0 90 < th dose independent rect. 3 6
596 147.41 wind 9.0 10 < th dose independent rect. 16 16
620 147.50 wind 9.0 90 < th dose dependent rect. 19 8
630 147.55 atmosphere 995.0 10 > th dose independent rect. 16 16
641 147.62 humidity 60.0 90 > th dose dependent rect. 3 8
672 147.77 radiation 1.0 270 < th dose dependent sin 17 NA
674 147.79 humidity 70.0 10 > th dose independent rect. 19 9
735 148.03 atmosphere 995.0 270 > th dose dependent rect. 1 17
738 148.05 humidity 60.0 90 > th dose dependent rect. 3 6
756 148.14 wind 7.0 270 < th dose independent rect. 1 5
763 148.17 temperature 10.0 270 > th dose independent rect. 1 5
765 148.17 temperature 30.0 270 < th dose independent rect. 1 5
766 148.17 humidity 50.0 270 > th dose independent rect. 1 5
769 148.17 atmosphere 995.0 270 > th dose independent rect. 1 5
770 148.17 atmosphere 1015.0 270 < th dose independent rect. 1 5
776 148.17 temperature 10.0 270 > th dose independent rect. 6 19
811 148.32 radiation 40.0 10 < th dose independent rect. 4 15
828 148.42 wind 9.0 270 < th dose independent rect. 3 2
829 148.42 temperature 10.0 270 > th dose independent rect. 3 2
831 148.42 temperature 30.0 270 < th dose independent rect. 3 2
832 148.42 humidity 50.0 270 > th dose independent rect. 3 2
835 148.42 atmosphere 995.0 270 > th dose independent rect. 3 2
836 148.42 atmosphere 1010.0 270 < th dose independent rect. 3 2
838 148.42 radiation 20.0 270 < th dose independent rect. 3 2
843 148.42 temperature 10.0 270 > th dose independent rect. 5 22
846 148.43 radiation 20.0 270 < th dose dependent rect. 3 2
890 148.59 precipitation 0.1 270 < th dose independent rect. 1 5
893 148.59 precipitation 0.1 270 < th dose dependent rect. 1 5
895 148.60 humidity 50.0 270 > th dose dependent rect. 2 4
917 148.68 wind 9.0 270 < th dose dependent rect. 6 8
929 148.74 wind 9.0 270 < th dose dependent rect. 17 8
938 148.77 radiation 1.0 270 < th dose independent sin 16 NA
949 148.78 humidity 50.0 270 > th dose dependent rect. 3 2
950 148.78 humidity 60.0 270 > th dose dependent rect. 1 8