Os01g0685600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0685600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 276.19 | 0.781 | 2.96 | -0.308 | 0.178 | -5.09 | -0.256 | 19.2 | -0.0335 | 16.9 | 49.06 | 187 | -- | -- |
| 280.14 | 0.78 | 3 | -0.557 | 0.201 | 1.94 | 0.335 | -- | -0.0397 | 17.1 | 44.63 | 115 | -- | -- |
| 275.9 | 0.774 | 2.94 | -0.326 | 0.168 | -6.74 | -- | 23.3 | -0.0156 | 16.4 | 48.31 | 176 | -- | -- |
| 277.04 | 0.775 | 3.02 | -0.524 | 0.104 | 2.8 | -- | -- | -0.0337 | 18.2 | 46 | 158 | -- | -- |
| 275.62 | 0.773 | 2.83 | -0.159 | -- | -33.3 | -- | 90.2 | -0.0777 | -- | 45.23 | 165 | -- | -- |
| 289.04 | 0.797 | 3.01 | -0.413 | 0.185 | -- | 0.335 | -- | -0.0323 | 14.7 | -- | -- | -- | -- |
| 289.36 | 0.797 | 3.01 | -0.404 | 0.194 | -- | -- | -- | -0.0299 | 15.4 | -- | -- | -- | -- |
| 277.53 | 0.776 | 3.01 | -0.529 | -- | 3.03 | -- | -- | -0.0285 | -- | 46 | 158 | -- | -- |
| 283.42 | 0.784 | 3 | -- | 0.134 | 2.53 | -- | -- | 0.0369 | 15.4 | 45.95 | 146 | -- | -- |
| 291.46 | 0.798 | 3.01 | -0.412 | -- | -- | -- | -- | -0.035 | -- | -- | -- | -- | -- |
| 293.66 | 0.802 | 3 | -- | 0.201 | -- | -- | -- | 0.0151 | 15.4 | -- | -- | -- | -- |
| 284.68 | 0.786 | 3 | -- | -- | 2.7 | -- | -- | 0.0309 | -- | 46 | 158 | -- | -- |
| 295.94 | 0.803 | 3 | -- | -- | -- | -- | -- | 0.0107 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 263.47 | humidity | 90 | 10 | < th | dose independent | rect. | 2 | 2 |
| 2 | 263.89 | humidity | 90 | 10 | < th | dose dependent | rect. | 2 | 2 |
| 4 | 264.24 | humidity | 80 | 90 | < th | dose independent | rect. | 2 | 2 |
| 26 | 267.11 | humidity | 80 | 10 | < th | dose dependent | rect. | 20 | 2 |
| 28 | 267.50 | humidity | 80 | 10 | < th | dose dependent | rect. | 20 | 6 |
| 30 | 267.52 | humidity | 80 | 10 | < th | dose dependent | rect. | 20 | 4 |
| 33 | 267.55 | humidity | 80 | 10 | < th | dose dependent | rect. | 20 | 9 |
| 41 | 268.44 | humidity | 50 | 30 | < th | dose independent | rect. | 15 | 3 |
| 79 | 268.61 | wind | 9 | 30 | > th | dose independent | rect. | 21 | 5 |
| 98 | 268.61 | wind | 9 | 30 | > th | dose dependent | rect. | 21 | 5 |
| 123 | 268.71 | humidity | 50 | 30 | < th | dose dependent | rect. | 15 | 3 |
| 160 | 268.80 | humidity | 80 | 90 | < th | dose dependent | rect. | 19 | 4 |
| 205 | 268.91 | humidity | 50 | 90 | < th | dose dependent | rect. | 15 | 1 |
| 217 | 268.97 | humidity | 80 | 90 | < th | dose dependent | rect. | 19 | 6 |
| 256 | 269.02 | humidity | 80 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 273 | 269.22 | humidity | 50 | 90 | > th | dose independent | sin | 12 | NA |
| 304 | 269.34 | wind | 1 | 30 | < th | dose independent | rect. | 15 | 1 |
| 306 | 269.34 | wind | 1 | 30 | < th | dose dependent | rect. | 15 | 1 |
| 311 | 269.38 | humidity | 80 | 90 | < th | dose independent | rect. | 19 | 8 |
| 334 | 269.65 | humidity | 90 | 90 | < th | dose dependent | rect. | 19 | 10 |
| 335 | 269.66 | humidity | 80 | 90 | < th | dose independent | rect. | 19 | 11 |
| 347 | 269.75 | humidity | 50 | 90 | < th | dose dependent | sin | 12 | NA |
| 369 | 270.14 | humidity | 50 | 90 | < th | dose independent | sin | 12 | NA |
| 382 | 270.31 | humidity | 80 | 90 | > th | dose independent | rect. | 19 | 14 |
| 391 | 270.39 | temperature | 30 | 30 | > th | dose independent | rect. | 14 | 20 |
| 395 | 270.47 | humidity | 80 | 270 | < th | dose dependent | rect. | 18 | 1 |
| 418 | 270.84 | humidity | 80 | 90 | < th | dose independent | rect. | 19 | 3 |
| 431 | 271.17 | temperature | 30 | 30 | > th | dose independent | rect. | 14 | 5 |
| 447 | 271.20 | humidity | 80 | 90 | > th | dose independent | sin | 11 | NA |
| 466 | 271.33 | temperature | 30 | 30 | > th | dose independent | sin | 12 | NA |
| 477 | 271.41 | humidity | 80 | 90 | < th | dose independent | rect. | 19 | 6 |
| 478 | 271.42 | temperature | 30 | 30 | < th | dose independent | sin | 12 | NA |
| 481 | 271.48 | radiation | 10 | 30 | < th | dose independent | rect. | 10 | 4 |
| 505 | 271.69 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 3 | 1 |
| 530 | 272.11 | wind | 9 | 270 | > th | dose independent | rect. | 18 | 4 |
| 539 | 272.23 | humidity | 80 | 10 | < th | dose independent | rect. | 19 | 4 |
| 582 | 272.66 | radiation | 10 | 90 | < th | dose dependent | rect. | 11 | 2 |
| 663 | 273.17 | humidity | 80 | 90 | < th | dose independent | rect. | 21 | 7 |
| 695 | 273.44 | humidity | 80 | 90 | < th | dose independent | sin | 11 | NA |
| 833 | 274.18 | humidity | 80 | 90 | > th | dose independent | rect. | 13 | 21 |
| 837 | 274.21 | radiation | 1 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 858 | 274.32 | radiation | 40 | 4320 | < th | dose independent | rect. | 15 | 2 |
| 863 | 274.33 | wind | 9 | 270 | > th | dose dependent | rect. | 18 | 16 |
| 867 | 274.36 | radiation | 40 | 4320 | < th | dose independent | rect. | 15 | 4 |
| 884 | 274.42 | radiation | 40 | 4320 | < th | dose independent | rect. | 15 | 14 |
| 889 | 274.45 | humidity | 90 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 891 | 274.46 | humidity | 80 | 10 | < th | dose independent | rect. | 22 | 2 |
| 911 | 274.52 | radiation | 40 | 4320 | < th | dose independent | rect. | 15 | 8 |
| 920 | 274.57 | wind | 9 | 30 | < th | dose independent | sin | 10 | NA |