Os01g0685400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0685400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 298.64 | 0.812 | 6.71 | -0.614 | 1.11 | 1.88 | 0.118 | 0.843 | 0.229 | 3.94 | 22.83 | 1295 | -- | -- |
| 300.14 | 0.807 | 6.68 | -0.32 | 1.12 | 1.89 | 0.0125 | -- | 0.305 | 3.83 | 22.84 | 1252 | -- | -- |
| 298.46 | 0.805 | 6.71 | -0.62 | 1.12 | 1.87 | -- | 0.834 | 0.225 | 3.85 | 22.84 | 1252 | -- | -- |
| 300.14 | 0.807 | 6.68 | -0.32 | 1.12 | 1.89 | -- | -- | 0.304 | 3.84 | 22.85 | 1256 | -- | -- |
| 360.63 | 0.884 | 6.69 | -0.391 | -- | 1.91 | -- | 0.614 | 0.275 | -- | 22.7 | 1841 | -- | -- |
| 457.18 | 1 | 6.84 | -0.986 | 0.964 | -- | -0.0323 | -- | -0.417 | 4.33 | -- | -- | -- | -- |
| 457.18 | 1 | 6.84 | -0.986 | 0.964 | -- | -- | -- | -0.417 | 4.34 | -- | -- | -- | -- |
| 361.56 | 0.886 | 6.68 | -0.226 | -- | 1.85 | -- | -- | 0.341 | -- | 22.93 | 1788 | -- | -- |
| 302.38 | 0.81 | 6.67 | -- | 1.11 | 1.94 | -- | -- | 0.364 | 3.88 | 22.9 | 1263 | -- | -- |
| 507.14 | 1.05 | 6.85 | -0.948 | -- | -- | -- | -- | -0.392 | -- | -- | -- | -- | -- |
| 482.8 | 1.03 | 6.81 | -- | 0.945 | -- | -- | -- | -0.307 | 4.36 | -- | -- | -- | -- |
| 362.74 | 0.887 | 6.67 | -- | -- | 1.9 | -- | -- | 0.387 | -- | 22.9 | 1834 | -- | -- |
| 530.84 | 1.08 | 6.82 | -- | -- | -- | -- | -- | -0.287 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 299.45 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 20 |
| 22 | 306.11 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 20 |
| 47 | 309.63 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 75 | 311.65 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 15 |
| 79 | 311.77 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 98 | 312.68 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 16 |
| 116 | 313.01 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 163 | 313.72 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 187 | 314.23 | temperature | 10 | 720 | > th | dose dependent | sin | 7 | NA |
| 193 | 314.32 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 221 | 314.85 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 231 | 315.00 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 251 | 315.23 | temperature | 25 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 259 | 315.33 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 371 | 316.54 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 411 | 317.02 | temperature | 15 | 1440 | > th | dose dependent | rect. | 17 | 13 |
| 430 | 317.22 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 473 | 317.58 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 491 | 317.74 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 539 | 318.07 | temperature | 30 | 720 | < th | dose dependent | sin | 8 | NA |
| 562 | 318.35 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 574 | 318.42 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 586 | 318.54 | temperature | 15 | 1440 | > th | dose dependent | sin | 12 | NA |
| 788 | 319.79 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 8 |
| 828 | 319.98 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 949 | 320.78 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |