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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0685300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.67 (0.0342) R2 : 0.426
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.56 (0.0855) R2dC : 0.421 R2C : 0.415
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.186 (0.0719) R2dN8 : 0.0109 R2N8 : 0.00469
σ : 0.645
deviance : 190
__
_____
C
peak time of C : 20.9
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
170.72 0.614 4.68 -0.564 1.21 0.717 -0.39 0.364 0.13 19.3 27.42 10 -- --
171.25 0.609 4.68 -0.576 1.21 0.725 -0.281 -- 0.13 19.3 27.78 9 -- --
171.05 0.609 4.68 -0.559 1.21 0.717 -- 0.259 0.129 19.3 27.42 9 -- --
171.31 0.61 4.67 -0.566 1.21 0.716 -- -- 0.129 19.3 27.33 9 -- --
233.82 0.712 4.65 -0.485 -- 0.938 -- 0.26 0.109 -- 10.14 6 -- --
180.6 0.63 4.69 -0.591 1.56 -- 0.138 -- 0.12 20.9 -- -- -- --
180.67 0.629 4.69 -0.595 1.56 -- -- -- 0.12 20.9 -- -- -- --
233.29 0.711 4.64 -0.618 -- 0.943 -- -- 0.12 -- 10 6 -- --
179.76 0.628 4.66 -- 1.22 0.697 -- -- 0.188 19.4 27.33 9 -- --
319.15 0.835 4.65 -0.595 -- -- -- -- 0.109 -- -- -- -- --
190 0.645 4.67 -- 1.56 -- -- -- 0.186 20.9 -- -- -- --
243.18 0.726 4.63 -- -- 0.926 -- -- 0.199 -- 7.22 4 -- --
328.49 0.846 4.63 -- -- -- -- -- 0.175 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 162.01 radiation 10 10 < th dose dependent rect. 12 1
3 162.55 radiation 10 30 < th dose independent rect. 10 3
7 165.55 wind 1 90 < th dose dependent rect. 10 1
13 167.11 radiation 30 10 < th dose dependent rect. 21 23
18 168.86 radiation 20 10 < th dose independent rect. 8 12
19 168.92 radiation 10 10 > th dose independent rect. 9 23
20 169.01 radiation 30 10 < th dose dependent rect. 8 23
24 169.25 radiation 10 10 < th dose independent rect. 21 23
26 169.39 radiation 10 10 < th dose independent rect. 23 21
30 169.65 radiation 30 10 < th dose dependent rect. 8 12
31 169.69 radiation 20 10 < th dose independent rect. 10 10
34 170.06 wind 7 4320 > th dose independent rect. 7 2
38 170.16 radiation 30 10 < th dose dependent rect. 10 10
45 170.44 wind 7 4320 < th dose independent rect. 7 2
47 170.50 humidity 60 720 > th dose independent rect. 24 22
50 170.58 temperature 15 1440 > th dose independent rect. 21 3
53 170.63 radiation 20 10 < th dose independent rect. 8 23
56 170.73 humidity 60 720 > th dose independent rect. 10 8
58 170.78 wind 5 4320 > th dose dependent rect. 19 14
62 170.80 radiation 40 720 < th dose independent rect. 6 16
65 170.81 radiation 30 10 < th dose dependent rect. 4 16
66 170.84 humidity 90 720 < th dose independent rect. 6 3
68 170.85 radiation 30 10 < th dose dependent rect. 10 23
74 170.90 humidity 60 720 > th dose independent rect. 5 17
77 170.92 radiation 30 10 < th dose dependent no NA NA
79 170.94 radiation 30 10 < th dose dependent rect. 15 23
83 171.00 radiation 20 10 < th dose dependent rect. 10 21
85 171.01 radiation 30 10 < th dose dependent rect. 13 23
90 171.06 radiation 30 10 < th dose dependent sin 3 NA
91 171.06 temperature 20 1440 < th dose dependent rect. 15 4
96 171.08 radiation 10 10 < th dose dependent rect. 4 11
103 171.13 radiation 40 720 < th dose independent rect. 10 8
105 171.15 wind 1 90 < th dose independent rect. 11 1
112 171.19 humidity 90 720 < th dose independent rect. 8 1
113 171.19 humidity 50 720 > th dose dependent rect. 10 8
119 171.22 wind 5 4320 > th dose independent rect. 20 13
123 171.25 radiation 10 10 > th dose independent rect. 7 9
138 171.28 radiation 40 720 < th dose independent rect. 24 22
142 171.29 radiation 20 10 < th dose independent rect. 4 16
144 171.29 temperature 15 270 > th dose independent rect. 17 21
149 171.33 temperature 15 720 > th dose independent rect. 20 1
154 171.35 temperature 15 30 > th dose independent rect. 20 12
156 171.36 wind 5 4320 < th dose independent rect. 20 13
158 171.36 wind 9 14400 > th dose dependent sin 8 NA
166 171.39 radiation 40 720 < th dose independent rect. 21 21
167 171.40 humidity 60 720 < th dose independent sin 13 NA
168 171.41 temperature 15 10 > th dose independent rect. 20 19
174 171.42 wind 5 4320 > th dose dependent sin 10 NA
178 171.44 temperature 15 10 > th dose independent rect. 20 8
180 171.44 radiation 1 14400 < th dose dependent rect. 19 8
181 171.45 radiation 30 10 < th dose dependent rect. 4 14
182 171.47 atmosphere 1010 10 < th dose independent rect. 20 8
190 171.52 radiation 1 14400 < th dose dependent rect. 21 6
191 171.52 radiation 10 10 < th dose dependent rect. 4 14
202 171.58 atmosphere 1010 30 < th dose independent rect. 20 12
205 171.59 wind 7 4320 < th dose independent rect. 18 16
214 171.62 wind 7 4320 > th dose independent rect. 19 15
226 171.67 temperature 20 1440 < th dose dependent rect. 10 11
233 171.68 temperature 20 1440 < th dose dependent rect. 7 14
240 171.70 humidity 90 30 < th dose independent rect. 20 10
242 171.71 humidity 60 720 > th dose independent sin 22 NA
265 171.80 radiation 10 10 < th dose independent sin 1 NA
268 171.81 wind 9 14400 > th dose independent sin 9 NA
269 171.81 wind 9 14400 < th dose independent sin 9 NA
301 171.86 temperature 20 4320 > th dose independent rect. 19 1
313 171.87 humidity 70 720 < th dose dependent sin 12 NA
319 171.89 humidity 60 720 < th dose independent rect. 17 1
326 171.91 radiation 40 720 < th dose independent sin 22 NA
327 171.91 temperature 15 1440 > th dose independent rect. 8 8
328 171.91 temperature 20 4320 > th dose independent rect. 12 9
332 171.92 humidity 60 720 > th dose independent rect. 7 12
334 171.92 temperature 15 1440 > th dose independent rect. 8 16
339 171.92 humidity 50 720 > th dose dependent rect. 6 15
348 171.95 wind 5 14400 > th dose dependent rect. 6 1
352 171.96 humidity 60 720 > th dose independent rect. 20 22
356 171.97 radiation 10 10 > th dose independent sin 1 NA
357 171.97 temperature 20 4320 > th dose independent rect. 13 7
392 172.03 humidity 90 14400 > th dose independent rect. 10 1
407 172.05 radiation 10 10 < th dose independent rect. 4 14
408 172.06 wind 7 4320 > th dose independent rect. 5 5
445 172.12 wind 5 4320 > th dose independent sin 11 NA
448 172.12 humidity 60 720 < th dose independent rect. 16 3
510 172.17 humidity 60 720 < th dose independent rect. 13 7
534 172.18 radiation 10 10 > th dose independent rect. 11 23
537 172.19 humidity 70 720 < th dose dependent rect. 16 2
549 172.21 temperature 15 270 > th dose independent rect. 17 8
581 172.24 radiation 10 10 < th dose independent rect. 11 23
584 172.25 radiation 10 10 < th dose independent rect. 4 11
596 172.27 radiation 10 10 < th dose independent no NA NA
612 172.27 humidity 50 720 > th dose dependent sin 22 NA
650 172.30 temperature 20 4320 < th dose independent rect. 11 11
666 172.31 wind 5 14400 > th dose dependent rect. 3 7
697 172.34 temperature 10 720 > th dose dependent rect. 12 7
709 172.36 radiation 10 10 < th dose independent rect. 15 23
740 172.40 radiation 10 10 > th dose independent rect. 9 7
743 172.40 temperature 20 1440 < th dose independent rect. 8 11
754 172.41 humidity 90 10 < th dose independent rect. 20 8
809 172.46 temperature 15 720 > th dose independent rect. 5 16
826 172.48 temperature 20 1440 < th dose dependent sin 21 NA
877 172.52 radiation 10 10 < th dose independent rect. 13 23
882 172.53 temperature 20 1440 > th dose independent rect. 8 11
908 172.54 temperature 10 720 > th dose dependent rect. 8 16
915 172.55 radiation 30 10 < th dose dependent rect. 3 23
937 172.58 atmosphere 1005 720 > th dose independent rect. 23 1
976 172.62 humidity 90 720 < th dose dependent rect. 12 9