Os01g0685000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0685000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.42 | 0.38 | 8.79 | 1.07 | 0.783 | -0.504 | 0.33 | 1.14 | -0.0403 | 3.18 | 20.54 | 3539 | -- | -- |
| 66.95 | 0.381 | 8.83 | 0.868 | 0.804 | -0.705 | 0.545 | -- | -0.0991 | 3.26 | 19.7 | 3674 | -- | -- |
| 65.78 | 0.378 | 8.79 | 1.07 | 0.785 | -0.51 | -- | 1.14 | -0.0392 | 3.18 | 20.52 | 3548 | -- | -- |
| 65.61 | 0.377 | 8.84 | 0.764 | 0.739 | -0.669 | -- | -- | -0.106 | 3.04 | 21.4 | 1551 | -- | -- |
| 92.33 | 0.45 | 8.85 | 0.656 | -- | -0.622 | -- | 0.0896 | -0.144 | -- | 20.52 | 3548 | -- | -- |
| 76.65 | 0.41 | 8.88 | 0.458 | 0.766 | -- | 0.399 | -- | -0.283 | 3.26 | -- | -- | -- | -- |
| 77.17 | 0.411 | 8.88 | 0.45 | 0.768 | -- | -- | -- | -0.286 | 3.26 | -- | -- | -- | -- |
| 90.51 | 0.445 | 8.85 | 0.638 | -- | -0.606 | -- | -- | -0.127 | -- | 21.3 | 1724 | -- | -- |
| 74.67 | 0.402 | 8.87 | -- | 0.772 | -0.38 | -- | -- | -0.22 | 2.85 | 22.4 | 542 | -- | -- |
| 110.55 | 0.491 | 8.88 | 0.483 | -- | -- | -- | -- | -0.266 | -- | -- | -- | -- | -- |
| 82.51 | 0.425 | 8.89 | -- | 0.777 | -- | -- | -- | -0.336 | 3.26 | -- | -- | -- | -- |
| 100.91 | 0.469 | 8.87 | -- | -- | -0.53 | -- | -- | -0.213 | -- | 21.3 | 1724 | -- | -- |
| 116.71 | 0.504 | 8.89 | -- | -- | -- | -- | -- | -0.319 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 61.79 | temperature | 20 | 270 | > th | dose independent | rect. | 14 | 20 |
| 2 | 62.11 | temperature | 20 | 90 | > th | dose independent | rect. | 16 | 19 |
| 7 | 62.53 | temperature | 20 | 270 | > th | dose dependent | rect. | 15 | 19 |
| 9 | 62.78 | temperature | 20 | 10 | > th | dose independent | rect. | 17 | 18 |
| 23 | 63.28 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 26 | 63.35 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 54 | 64.08 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 17 |
| 62 | 64.16 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 10 |
| 64 | 64.17 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 5 |
| 65 | 64.17 | temperature | 20 | 270 | > th | dose independent | rect. | 5 | 14 |
| 67 | 64.18 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 20 |
| 75 | 64.24 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 10 |
| 82 | 64.30 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 2 |
| 88 | 64.33 | temperature | 20 | 720 | > th | dose independent | rect. | 22 | 4 |
| 159 | 64.72 | temperature | 20 | 10 | > th | dose independent | rect. | 6 | 14 |
| 165 | 64.75 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 2 |
| 166 | 64.75 | temperature | 20 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 174 | 64.78 | wind | 5 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 175 | 64.79 | temperature | 20 | 1440 | > th | dose independent | sin | 10 | NA |
| 180 | 64.79 | temperature | 20 | 14400 | > th | dose dependent | rect. | 9 | 6 |
| 193 | 64.83 | temperature | 20 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 203 | 64.86 | wind | 1 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 231 | 64.92 | temperature | 20 | 1440 | < th | dose independent | sin | 10 | NA |
| 236 | 64.93 | temperature | 25 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 284 | 65.02 | temperature | 25 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 362 | 65.16 | wind | 1 | 14400 | > th | dose dependent | rect. | 22 | 4 |
| 370 | 65.17 | wind | 5 | 14400 | < th | dose dependent | rect. | 22 | 4 |
| 374 | 65.18 | temperature | 20 | 14400 | > th | dose dependent | sin | 23 | NA |
| 421 | 65.26 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 19 |
| 529 | 65.42 | temperature | 25 | 14400 | < th | dose independent | rect. | 3 | 13 |
| 547 | 65.44 | temperature | 25 | 14400 | < th | dose independent | rect. | 5 | 11 |
| 558 | 65.45 | wind | 3 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 571 | 65.46 | temperature | 25 | 14400 | > th | dose independent | rect. | 1 | 15 |
| 587 | 65.48 | radiation | 20 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 602 | 65.49 | temperature | 25 | 14400 | > th | dose independent | rect. | 5 | 11 |
| 654 | 65.54 | wind | 3 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 668 | 65.54 | temperature | 10 | 30 | > th | dose dependent | rect. | 6 | 14 |
| 820 | 65.67 | temperature | 25 | 14400 | < th | dose independent | sin | 1 | NA |
| 849 | 65.69 | temperature | 20 | 10 | > th | dose independent | rect. | 6 | 21 |
| 859 | 65.70 | temperature | 20 | 270 | > th | dose independent | rect. | 4 | 5 |
| 873 | 65.70 | temperature | 15 | 270 | > th | dose dependent | rect. | 22 | 11 |
| 881 | 65.71 | temperature | 25 | 14400 | > th | dose independent | sin | 2 | NA |
| 897 | 65.72 | humidity | 90 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 919 | 65.73 | temperature | 30 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 978 | 65.77 | temperature | 20 | 4320 | > th | dose independent | rect. | 17 | 6 |
| 980 | 65.77 | temperature | 20 | 4320 | > th | dose independent | rect. | 16 | 8 |
| 984 | 65.77 | humidity | 90 | 43200 | > th | dose dependent | rect. | 16 | 1 |