Os01g0681800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0681800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 274.4 | 0.778 | 12.9 | 1.69 | 2.53 | -2.65 | -0.639 | 0.168 | 0.859 | 0.323 | 24.28 | 2880 | -- | -- |
| 274.43 | 0.772 | 12.9 | 1.71 | 2.53 | -2.67 | -0.631 | -- | 0.867 | 0.319 | 24.2 | 2893 | -- | -- |
| 276.13 | 0.774 | 12.9 | 1.69 | 2.52 | -2.63 | -- | 0.292 | 0.856 | 0.298 | 24.36 | 2843 | -- | -- |
| 276.18 | 0.774 | 12.9 | 1.74 | 2.53 | -2.68 | -- | -- | 0.868 | 0.305 | 24.16 | 2866 | -- | -- |
| 569.7 | 1.11 | 12.9 | 1.67 | -- | -3.93 | -- | 0.895 | 0.683 | -- | 28.5 | 941 | -- | -- |
| 390.35 | 0.926 | 12.8 | 2.88 | 2.62 | -- | -0.711 | -- | 1.54 | 0.46 | -- | -- | -- | -- |
| 392.51 | 0.928 | 12.8 | 2.91 | 2.62 | -- | -- | -- | 1.55 | 0.435 | -- | -- | -- | -- |
| 571.08 | 1.11 | 12.9 | 1.83 | -- | -3.96 | -- | -- | 0.726 | -- | 28.32 | 939 | -- | -- |
| 273.49 | 0.77 | 13 | -- | 2.56 | -3.08 | -- | -- | 0.432 | 0.413 | 23.96 | 41178 | -- | -- |
| 823.19 | 1.34 | 12.7 | 3 | -- | -- | -- | -- | 1.59 | -- | -- | -- | -- | -- |
| 615.25 | 1.16 | 12.8 | -- | 2.66 | -- | -- | -- | 1.22 | 0.491 | -- | -- | -- | -- |
| 653.97 | 1.19 | 12.9 | -- | -- | -4.6 | -- | -- | 0.592 | -- | 28.3 | 945 | -- | -- |
| 1060.05 | 1.52 | 12.8 | -- | -- | -- | -- | -- | 1.26 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 255.36 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 3 | 256.54 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 2 | 5 |
| 4 | 256.54 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 2 | 5 |
| 5 | 256.67 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 5 |
| 8 | 257.64 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 13 | 257.98 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 5 |
| 17 | 258.24 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 6 | 10 |
| 21 | 258.42 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 6 | 10 |
| 27 | 258.62 | atmosphere | 1010.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 28 | 258.62 | atmosphere | 1010.0 | 43200 | > th | dose dependent | rect. | 3 | 3 |
| 43 | 258.93 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 53 | 259.15 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 56 | 259.24 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 69 | 259.41 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 83 | 259.52 | atmosphere | 1010.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 94 | 259.67 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 20 | 13 |
| 95 | 259.68 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 125 | 259.99 | atmosphere | 1010.0 | 43200 | > th | dose dependent | sin | 7 | NA |
| 162 | 260.20 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 21 | 12 |
| 332 | 260.87 | atmosphere | 1010.0 | 43200 | > th | dose dependent | no | NA | NA |
| 357 | 260.94 | atmosphere | 1010.0 | 43200 | > th | dose dependent | rect. | 7 | 23 |
| 435 | 261.33 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 440 | 261.34 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 442 | 261.34 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 12 |
| 454 | 261.37 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 457 | 261.39 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 20 | 13 |
| 459 | 261.40 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 479 | 261.49 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 22 | 18 |
| 483 | 261.50 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 488 | 261.51 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 24 | 16 |
| 491 | 261.52 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 511 | 261.60 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 526 | 261.63 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 9 |
| 544 | 261.73 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 9 |
| 545 | 261.73 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 9 |
| 546 | 261.73 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 9 |
| 550 | 261.75 | atmosphere | 1010.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 551 | 261.75 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 8 |
| 576 | 261.85 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 583 | 261.89 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 623 | 262.08 | atmosphere | 1010.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 697 | 262.45 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 2 | 7 |
| 741 | 262.60 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 17 | 9 |
| 755 | 262.66 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 782 | 262.72 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 844 | 262.97 | atmosphere | 1010.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 896 | 263.21 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 2 | 7 |
| 911 | 263.31 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 12 |
| 914 | 263.34 | temperature | 20.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 950 | 263.48 | radiation | 1.0 | 43200 | < th | dose dependent | sin | 12 | NA |
| 987 | 263.66 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 22 | 7 |