Os01g0681700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0681700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 167.34 | 0.608 | 3.04 | -0.259 | 0.193 | -3.25 | -0.991 | -6.11 | -0.0128 | 0.733 | 8.996 | 28 | -- | -- |
| 168.78 | 0.605 | 3.02 | -0.297 | 0.193 | -1.63 | -1.1 | -- | -0.00991 | 0.738 | 8.918 | 28 | -- | -- |
| 170.59 | 0.608 | 3.04 | -0.185 | 0.234 | -3.42 | -- | -7.66 | 0.00286 | 22.8 | 8.9 | 25 | -- | -- |
| 171.4 | 0.61 | 3.01 | -0.267 | 0.247 | -1.69 | -- | -- | 0.0059 | 22.6 | 9.4 | 18 | -- | -- |
| 173.55 | 0.614 | 3.04 | -0.221 | -- | -3.5 | -- | -8.08 | -0.0118 | -- | 8.957 | 25 | -- | -- |
| 175.18 | 0.62 | 3.03 | -0.389 | 0.172 | -- | -0.903 | -- | -0.044 | 0.0234 | -- | -- | -- | -- |
| 177.91 | 0.625 | 3.03 | -0.35 | 0.214 | -- | -- | -- | -0.0371 | 21.7 | -- | -- | -- | -- |
| 172.9 | 0.612 | 3.01 | -0.337 | -- | -2.23 | -- | -- | -0.0565 | -- | 10.4 | 19 | -- | -- |
| 173.32 | 0.613 | 3.02 | -- | 0.233 | -1.78 | -- | -- | 0.0256 | 22.5 | 9.312 | 18 | -- | -- |
| 180.64 | 0.628 | 3.02 | -0.348 | -- | -- | -- | -- | -0.0374 | -- | -- | -- | -- | -- |
| 181.14 | 0.63 | 3.02 | -- | 0.214 | -- | -- | -- | 0.00193 | 21.5 | -- | -- | -- | -- |
| 174.38 | 0.615 | 3.01 | -- | -- | -1.96 | -- | -- | 0.0177 | -- | 10.39 | 25 | -- | -- |
| 183.84 | 0.633 | 3.01 | -- | -- | -- | -- | -- | 0.00121 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 153.81 | humidity | 70 | 30 | < th | dose independent | rect. | 19 | 1 |
| 13 | 154.80 | humidity | 70 | 30 | < th | dose dependent | rect. | 19 | 1 |
| 83 | 157.00 | temperature | 30 | 90 | > th | dose independent | rect. | 18 | 1 |
| 97 | 157.28 | temperature | 30 | 90 | > th | dose dependent | rect. | 18 | 1 |
| 113 | 159.97 | wind | 9 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 156 | 161.41 | wind | 9 | 30 | > th | dose dependent | sin | 5 | NA |
| 158 | 161.64 | wind | 9 | 30 | > th | dose independent | rect. | 11 | 1 |
| 165 | 162.02 | wind | 9 | 30 | > th | dose dependent | rect. | 18 | 18 |
| 255 | 163.56 | wind | 9 | 30 | < th | dose independent | sin | 1 | NA |
| 257 | 163.68 | wind | 9 | 30 | > th | dose independent | sin | 4 | NA |
| 346 | 164.83 | humidity | 50 | 270 | < th | dose independent | rect. | 17 | 1 |
| 362 | 164.83 | humidity | 50 | 270 | < th | dose dependent | rect. | 17 | 1 |
| 434 | 165.16 | radiation | 10 | 10 | < th | dose independent | rect. | 12 | 1 |
| 505 | 166.70 | wind | 9 | 30 | < th | dose independent | sin | 6 | NA |
| 662 | 168.07 | wind | 9 | 30 | < th | dose independent | no | NA | NA |
| 676 | 168.16 | wind | 9 | 30 | > th | dose independent | rect. | 15 | 21 |
| 867 | 168.83 | wind | 9 | 30 | > th | dose dependent | rect. | 15 | 21 |