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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0679400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.41 (0.0251) R2 : 0.00232
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0543 (0.0528) R2dN8 : 0.003 R2N8 : 0.00232
σ : 0.472
deviance : 102.22
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
94.9 0.458 3.45 -0.258 0.205 -1.02 -0.457 4.26 -0.0331 4.95 1000 711 -- --
97.13 0.463 3.41 -0.0298 0.214 -0.276 -0.503 -- -0.0406 4.45 1000 711 -- --
95.39 0.455 3.45 -0.247 0.205 -1.02 -- 4.19 -0.0353 5.28 1000 669 -- --
97.75 0.46 3.41 -0.0256 0.209 -0.309 -- -- -0.0345 5.61 1000 662 -- --
97.56 0.46 3.45 -0.247 -- -1.02 -- 4.22 -0.0253 -- 1000 673 -- --
99.21 0.467 3.41 0.0195 0.208 -- -0.522 -- -0.059 4.45 -- -- -- --
99.9 0.468 3.41 0.0239 0.209 -- -- -- -0.0562 4.99 -- -- -- --
100.04 0.466 3.41 -0.0126 -- -0.297 -- -- -0.0308 -- 1000 729 -- --
97.69 0.46 3.41 -- 0.209 -0.296 -- -- -0.0322 5.15 1000 662 -- --
102.19 0.472 3.41 0.0315 -- -- -- -- -0.0508 -- -- -- -- --
99.92 0.468 3.41 -- 0.209 -- -- -- -0.0588 4.98 -- -- -- --
100.04 0.466 3.41 -- -- -0.295 -- -- -0.0281 -- 1000 734 -- --
102.22 0.472 3.41 -- -- -- -- -- -0.0543 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 83.29 radiation 1.0 43200 < th dose dependent rect. 3 1
7 84.57 temperature 20.0 30 > th dose dependent rect. 2 1
10 84.61 atmosphere 1005.0 30 > th dose dependent rect. 2 1
16 84.66 atmosphere 1005.0 30 > th dose independent rect. 2 1
19 84.68 wind 9.0 1440 < th dose independent rect. 3 1
20 84.68 temperature 10.0 1440 > th dose independent rect. 3 1
23 84.68 temperature 30.0 1440 < th dose independent rect. 3 1
27 84.68 humidity 50.0 1440 > th dose independent rect. 3 1
36 84.68 atmosphere 995.0 1440 > th dose independent rect. 3 1
37 84.68 radiation 1.0 1440 < th dose independent rect. 3 1
57 84.68 temperature 10.0 1440 > th dose independent rect. 4 23
67 84.72 temperature 20.0 30 > th dose independent rect. 2 1
68 84.72 wind 3.0 30 < th dose dependent rect. 2 1
70 84.75 wind 3.0 30 < th dose independent rect. 2 1
75 84.79 atmosphere 1000.0 30 > th dose independent rect. 3 23
79 84.87 humidity 90.0 30 > th dose independent rect. 2 1
80 84.87 humidity 70.0 30 > th dose dependent rect. 2 1
86 84.91 temperature 10.0 30 > th dose independent rect. 2 1
88 84.91 temperature 30.0 30 < th dose independent rect. 2 1
89 84.91 humidity 50.0 30 > th dose independent rect. 2 1
93 84.91 atmosphere 1010.0 30 < th dose independent rect. 2 1
95 84.91 radiation 1.0 30 < th dose independent rect. 2 1
100 84.91 precipitation 0.1 30 < th dose independent rect. 2 1
101 84.91 temperature 10.0 30 > th dose independent rect. 3 23
102 84.91 radiation 1.0 30 < th dose dependent rect. 2 1
107 84.91 precipitation 0.1 30 < th dose dependent rect. 2 1
114 85.26 atmosphere 1015.0 30 < th dose dependent rect. 2 1
116 85.40 temperature 30.0 30 < th dose dependent rect. 2 1
117 85.53 wind 1.0 30 > th dose independent rect. 2 1
169 86.40 precipitation 0.1 30 < th dose independent rect. 3 23
170 86.40 precipitation 0.1 30 < th dose dependent rect. 3 23
175 86.70 wind 9.0 30 < th dose independent rect. 3 23
194 89.04 humidity 50.0 30 > th dose independent rect. 3 23
198 89.20 humidity 50.0 720 > th dose independent rect. 23 16
207 90.22 precipitation 0.1 720 < th dose independent rect. 15 8
208 90.22 precipitation 0.1 720 < th dose dependent rect. 15 8
213 90.79 atmosphere 995.0 720 > th dose independent rect. 23 16
214 90.82 temperature 10.0 720 > th dose independent rect. 3 8
215 90.82 atmosphere 995.0 720 > th dose independent rect. 3 8
216 90.82 temperature 10.0 720 > th dose independent rect. 11 16
217 90.84 temperature 10.0 720 > th dose independent rect. 15 8
218 90.84 temperature 10.0 720 > th dose independent rect. 23 16
219 90.86 humidity 50.0 720 > th dose independent rect. 3 8
245 90.97 precipitation 0.1 720 < th dose independent rect. 11 16
246 90.97 precipitation 0.1 720 < th dose dependent rect. 11 16
247 91.08 wind 9.0 720 < th dose independent rect. 3 8
255 91.33 temperature 30.0 30 < th dose independent rect. 3 23
260 91.58 radiation 10.0 30 < th dose dependent rect. 3 23
261 91.60 humidity 90.0 90 < th dose independent rect. 2 1
264 91.77 atmosphere 995.0 720 > th dose independent rect. 11 16
266 91.84 atmosphere 995.0 720 > th dose independent rect. 15 8
272 92.13 temperature 25.0 270 > th dose independent rect. 23 4
273 92.13 atmosphere 1000.0 720 > th dose independent rect. 7 8
275 92.25 radiation 10.0 30 < th dose independent rect. 3 23
277 92.29 radiation 20.0 720 > th dose independent rect. 16 1
291 92.31 atmosphere 1015.0 720 < th dose independent rect. 3 8
293 92.38 temperature 10.0 30 > th dose dependent rect. 3 23
296 92.58 precipitation 0.1 720 < th dose independent rect. 3 8
297 92.58 precipitation 0.1 720 < th dose dependent rect. 3 8
299 92.62 humidity 80.0 14400 < th dose dependent rect. 3 6
304 92.69 humidity 50.0 720 > th dose independent rect. 7 8
311 92.77 wind 9.0 720 < th dose independent rect. 15 8
322 92.95 radiation 10.0 720 > th dose dependent rect. 16 1
325 93.00 precipitation 0.1 720 < th dose independent rect. 23 16
327 93.00 precipitation 0.1 720 < th dose dependent rect. 23 16
331 93.09 wind 1.0 30 < th dose independent rect. 13 14
348 93.14 wind 1.0 30 < th dose independent rect. 23 4
358 93.20 wind 3.0 10 < th dose dependent rect. 22 5
359 93.22 humidity 50.0 4320 > th dose independent rect. 14 1
370 93.33 atmosphere 1000.0 720 > th dose independent rect. 17 8
373 93.34 wind 7.0 720 < th dose independent rect. 13 16
375 93.40 atmosphere 1000.0 720 > th dose independent rect. 14 1
380 93.47 humidity 70.0 14400 > th dose independent rect. 8 1
393 93.47 temperature 25.0 270 > th dose dependent rect. 23 4
398 93.52 atmosphere 1000.0 720 > th dose independent rect. 3 23
403 93.59 humidity 70.0 14400 > th dose independent rect. 20 13
405 93.60 wind 3.0 14400 > th dose independent rect. 10 1
407 93.62 humidity 70.0 14400 > th dose independent rect. 4 5
409 93.63 humidity 70.0 14400 < th dose independent rect. 8 1
410 93.63 humidity 70.0 14400 > th dose independent rect. 1 8
422 93.70 atmosphere 1000.0 720 > th dose independent rect. 3 16
426 93.73 wind 1.0 720 > th dose independent rect. 15 8
429 93.75 wind 1.0 30 < th dose independent rect. 8 19
432 93.78 atmosphere 1000.0 720 > th dose independent rect. 13 22
433 93.80 atmosphere 1000.0 720 > th dose independent rect. 17 22
434 93.80 atmosphere 995.0 30 > th dose dependent rect. 3 23
437 93.82 humidity 60.0 1440 < th dose independent rect. 18 1
439 93.82 humidity 60.0 1440 < th dose dependent rect. 18 1
468 93.84 humidity 50.0 4320 < th dose independent rect. 14 1
469 93.85 humidity 60.0 1440 > th dose independent rect. 18 2
471 93.86 humidity 50.0 720 > th dose independent rect. 17 8
475 93.87 humidity 60.0 1440 > th dose independent rect. 18 5
491 93.94 wind 5.0 14400 < th dose independent rect. 11 1
492 93.94 humidity 70.0 14400 < th dose independent rect. 20 13
493 93.95 humidity 60.0 1440 > th dose independent rect. 18 13
505 93.98 atmosphere 1015.0 30 < th dose independent rect. 3 23
507 93.98 wind 3.0 30 < th dose dependent rect. 13 14
509 93.99 humidity 70.0 14400 < th dose independent rect. 6 3
521 94.01 wind 9.0 720 < th dose independent rect. 23 16
524 94.02 humidity 50.0 4320 < th dose dependent rect. 14 1
526 94.04 wind 5.0 14400 < th dose dependent rect. 10 2
543 94.06 humidity 50.0 1440 > th dose independent rect. 17 17
559 94.08 humidity 50.0 1440 < th dose independent rect. 17 17
563 94.11 wind 7.0 720 < th dose independent sin 14 NA
566 94.11 humidity 60.0 1440 < th dose dependent rect. 17 16
567 94.11 wind 9.0 30 < th dose dependent rect. 3 23
573 94.13 humidity 50.0 1440 < th dose dependent rect. 16 19
597 94.15 humidity 90.0 1440 < th dose independent rect. 2 2
638 94.19 radiation 20.0 720 < th dose dependent rect. 16 9
641 94.21 atmosphere 1000.0 720 > th dose independent rect. 13 16
649 94.23 humidity 90.0 1440 < th dose independent rect. 1 4
653 94.24 humidity 50.0 1440 < th dose independent rect. 16 19
676 94.26 wind 1.0 14400 < th dose dependent rect. 6 1
679 94.27 atmosphere 1000.0 720 > th dose independent rect. 17 16
691 94.29 wind 3.0 30 < th dose dependent rect. 15 12
703 94.31 wind 5.0 14400 < th dose independent rect. 10 5
732 94.32 precipitation 0.1 720 < th dose independent rect. 19 8
738 94.32 wind 7.0 720 < th dose independent rect. 15 14
748 94.32 precipitation 0.1 720 < th dose dependent rect. 19 8
777 94.34 humidity 90.0 1440 > th dose independent rect. 2 1
783 94.35 wind 7.0 720 > th dose dependent sin 13 NA
791 94.36 atmosphere 1000.0 720 > th dose independent rect. 21 23
862 94.44 wind 9.0 720 < th dose independent rect. 19 8
865 94.45 wind 5.0 14400 > th dose independent rect. 10 5
867 94.46 wind 1.0 10 < th dose independent rect. 2 5
869 94.46 atmosphere 1000.0 720 > th dose independent rect. 8 17
879 94.48 radiation 20.0 720 < th dose independent rect. 17 8
929 94.57 wind 1.0 14400 < th dose independent rect. 6 1
931 94.57 precipitation 0.1 720 < th dose independent rect. 15 16
933 94.57 precipitation 0.1 720 < th dose dependent rect. 15 16
998 94.67 atmosphere 1000.0 720 > th dose independent rect. 23 23