Os01g0678700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : DP protein.
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Os01g0678700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : DP protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 106.39 | 0.485 | 7.65 | -1.12 | 0.557 | -0.711 | 0.936 | -0.523 | -0.0514 | 17.3 | 68.73 | 4265 | -- | -- |
| 106.92 | 0.482 | 7.66 | -1.13 | 0.555 | -0.727 | 0.925 | -- | -0.0777 | 17.3 | 67.74 | 4255 | -- | -- |
| 108.27 | 0.485 | 7.65 | -1.12 | 0.567 | -0.721 | -- | -0.522 | -0.049 | 16.8 | 68.57 | 4282 | -- | -- |
| 108.79 | 0.486 | 7.65 | -1.14 | 0.56 | -0.763 | -- | -- | -0.0758 | 16.8 | 68 | 4280 | -- | -- |
| 124.95 | 0.521 | 7.64 | -1.13 | -- | -0.775 | -- | -0.516 | -0.0723 | -- | 69 | 4226 | -- | -- |
| 119.65 | 0.513 | 7.61 | -1.2 | 0.587 | -- | 0.944 | -- | 0.091 | 17.1 | -- | -- | -- | -- |
| 121.71 | 0.517 | 7.61 | -1.19 | 0.593 | -- | -- | -- | 0.0959 | 16.8 | -- | -- | -- | -- |
| 125.43 | 0.522 | 7.64 | -1.15 | -- | -0.824 | -- | -- | -0.0951 | -- | 68.45 | 4222 | -- | -- |
| 126.62 | 0.524 | 7.63 | -- | 0.597 | -1.36 | -- | -- | 0.0751 | 17.1 | 53.03 | 4149 | -- | -- |
| 140.36 | 0.554 | 7.6 | -1.22 | -- | -- | -- | -- | 0.0805 | -- | -- | -- | -- | -- |
| 159.23 | 0.59 | 7.58 | -- | 0.615 | -- | -- | -- | 0.229 | 16.7 | -- | -- | -- | -- |
| 144.04 | 0.559 | 7.61 | -- | -- | -1.44 | -- | -- | 0.0358 | -- | 53.26 | 4168 | -- | -- |
| 179.33 | 0.625 | 7.57 | -- | -- | -- | -- | -- | 0.215 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 99.89 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 3 | 99.91 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 5 | 100.45 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 20 | 12 |
| 6 | 100.50 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 20 | 12 |
| 19 | 101.06 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 34 | 101.34 | wind | 3.0 | 14400 | > th | dose independent | rect. | 20 | 12 |
| 35 | 101.35 | wind | 3.0 | 14400 | < th | dose independent | rect. | 20 | 12 |
| 37 | 101.37 | wind | 1.0 | 14400 | > th | dose dependent | sin | 10 | NA |
| 41 | 101.39 | wind | 9.0 | 14400 | < th | dose dependent | sin | 10 | NA |
| 42 | 101.39 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 24 | 8 |
| 47 | 101.44 | wind | 3.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 52 | 101.49 | wind | 3.0 | 14400 | > th | dose independent | rect. | 20 | 10 |
| 59 | 101.53 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 64 | 101.57 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 66 | 101.58 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 8 |
| 76 | 101.63 | wind | 3.0 | 14400 | < th | dose independent | rect. | 20 | 10 |
| 91 | 101.70 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 95 | 101.71 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 8 |
| 102 | 101.74 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 8 |
| 133 | 101.86 | wind | 3.0 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 134 | 101.87 | wind | 3.0 | 14400 | < th | dose independent | rect. | 2 | 6 |
| 150 | 101.92 | wind | 3.0 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 170 | 101.99 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 183 | 102.02 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 184 | 102.03 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 191 | 102.06 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 6 |
| 229 | 102.22 | radiation | 20.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 248 | 102.28 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 250 | 102.29 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 306 | 102.52 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 4 |
| 326 | 102.57 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 11 | 2 |
| 332 | 102.60 | wind | 3.0 | 14400 | < th | dose independent | sin | 10 | NA |
| 348 | 102.65 | wind | 3.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 355 | 102.67 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 356 | 102.67 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 4 |
| 374 | 102.67 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 3 |
| 386 | 102.70 | wind | 3.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 390 | 102.70 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 2 |
| 486 | 102.93 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 2 |
| 489 | 102.95 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 500 | 102.98 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 507 | 103.00 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 24 | 2 |
| 538 | 103.05 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 540 | 103.05 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 552 | 103.09 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 565 | 103.11 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 577 | 103.13 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 7 | 7 |
| 591 | 103.17 | radiation | 30.0 | 43200 | > th | dose independent | sin | 6 | NA |
| 595 | 103.17 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 19 |
| 601 | 103.18 | humidity | 60.0 | 4320 | > th | dose independent | sin | 8 | NA |
| 651 | 103.24 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 19 | 17 |
| 709 | 103.33 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 16 | 20 |
| 722 | 103.36 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 3 | 9 |
| 735 | 103.38 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 8 | 4 |
| 736 | 103.38 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 6 | 6 |
| 748 | 103.39 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 23 | 13 |
| 782 | 103.44 | wind | 9.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 803 | 103.45 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 15 | 20 |
| 820 | 103.47 | wind | 9.0 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 823 | 103.47 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 9 | 5 |
| 828 | 103.48 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 871 | 103.51 | radiation | 30.0 | 43200 | > th | dose independent | no | NA | NA |