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Os01g0678100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11 (0.0357) R2 : 0.779
β1 : 3.96 (0.173) R2dD : 0.583 R2D : 0.343
β2 : 1.76 (0.0778) R2dC : 0.249 R2C : 0.217
β3 : -2.63 (0.195) R2dE : 0.229 R2E : 0.21
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -5.75 (0.701) R2dD*E : 0.146 R2D*E : -0.519
γ1 : 0.465 (0.0743) R2dN8 : 0.031 R2N8 : -0.0101
σ : 0.594
deviance : 162.49
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C
peak time of C : 14.4
E
wheather : radiation
threshold : 0.7323
memory length : 4355
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
161.89 0.598 11 3.98 1.76 -2.6 -0.431 -5.7 0.469 14.5 0.824 4355 -- --
190.93 0.644 11.1 3.56 1.9 -1.33 0.0515 -- 0.522 14.6 2.58 4367 -- --
162.49 0.594 11 3.96 1.76 -2.63 -- -5.75 0.465 14.4 0.7323 4355 -- --
189.17 0.641 11.1 3.4 1.89 -1.35 -- -- 0.564 14.3 2.433 4350 -- --
207.51 0.671 11.1 3.47 -- -3.68 -- -4.99 0.292 -- 1.271 4708 -- --
229.91 0.711 11.1 3.5 1.81 -- -0.343 -- 0.619 14.3 -- -- -- --
230.35 0.711 11.1 3.49 1.8 -- -- -- 0.616 14.3 -- -- -- --
223.95 0.697 11.1 2.98 -- -2.8 -- -- 0.226 -- 2.517 4719 -- --
168.1 0.604 11.4 -- 1.86 -3.06 -- -- -0.764 14.2 1.121 47520 -- --
423.62 0.962 11.1 3.42 -- -- -- -- 0.573 -- -- -- -- --
552.24 1.1 11.1 -- 1.74 -- -- -- 0.227 14.2 -- -- -- --
332.96 0.85 11.3 -- -- -3.12 -- -- -0.733 -- 1.18 46520 -- --
731.92 1.26 11.2 -- -- -- -- -- 0.193 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 150.98 radiation 1 43200 < th dose dependent rect. 17 1
2 151.76 radiation 1 43200 < th dose dependent rect. 17 18
6 151.80 radiation 1 43200 < th dose dependent rect. 17 21
13 151.88 radiation 1 43200 < th dose dependent rect. 7 23
21 151.97 radiation 1 43200 < th dose dependent sin 12 NA
28 152.00 radiation 1 43200 < th dose dependent rect. 17 13
36 152.04 radiation 1 43200 < th dose dependent rect. 17 9
49 152.08 radiation 1 43200 < th dose dependent rect. 17 4
61 152.14 radiation 1 43200 < th dose dependent no NA NA
63 152.14 radiation 1 43200 < th dose dependent rect. 4 20
66 152.14 radiation 1 43200 < th dose dependent rect. 23 22
67 152.14 radiation 1 43200 < th dose dependent rect. 1 23
72 152.15 radiation 1 43200 < th dose dependent rect. 4 17
75 152.15 radiation 1 43200 < th dose dependent rect. 1 19
83 152.15 radiation 1 43200 < th dose dependent rect. 23 20
101 152.16 radiation 1 43200 < th dose dependent rect. 4 15
110 152.17 radiation 1 43200 < th dose dependent rect. 10 23
118 152.20 radiation 1 43200 < th dose dependent rect. 7 19
123 152.21 radiation 1 43200 < th dose dependent rect. 7 17
131 152.23 radiation 1 43200 < th dose dependent rect. 7 14
139 152.24 radiation 1 43200 < th dose dependent rect. 7 12
196 152.45 radiation 1 43200 < th dose dependent rect. 3 7
217 152.47 radiation 1 43200 < th dose dependent rect. 23 11
352 152.78 radiation 1 43200 < th dose dependent rect. 4 2
374 152.89 wind 9 43200 > th dose independent rect. 16 1
385 152.97 wind 9 43200 < th dose independent rect. 16 1
424 153.38 radiation 1 43200 < th dose independent rect. 7 14
438 153.65 radiation 1 43200 > th dose independent rect. 7 12
471 153.99 humidity 70 43200 > th dose dependent rect. 14 1
479 154.21 humidity 80 43200 < th dose independent rect. 15 2
483 154.29 radiation 1 43200 < th dose independent rect. 17 4
503 154.35 humidity 70 43200 > th dose dependent rect. 12 3
506 154.42 radiation 1 43200 < th dose independent rect. 17 22
507 154.43 radiation 1 43200 > th dose independent rect. 17 2
522 154.49 atmosphere 1010 43200 > th dose independent rect. 4 1
524 154.51 radiation 1 43200 > th dose independent rect. 7 1
525 154.51 atmosphere 1010 43200 > th dose dependent rect. 20 1
531 154.56 atmosphere 1010 43200 < th dose independent rect. 4 1
539 154.57 wind 7 43200 > th dose dependent rect. 16 1
542 154.58 atmosphere 1010 43200 < th dose independent rect. 11 1
545 154.59 radiation 1 43200 < th dose independent sin 20 NA
546 154.59 radiation 1 43200 < th dose independent rect. 7 1
569 154.68 radiation 30 43200 < th dose dependent rect. 18 12
571 154.69 radiation 1 43200 < th dose independent rect. 17 18
574 154.69 radiation 1 43200 > th dose independent rect. 17 22
580 154.71 atmosphere 1010 43200 > th dose independent rect. 11 1
630 154.91 radiation 1 43200 > th dose independent rect. 17 18
640 154.94 humidity 80 43200 < th dose independent rect. 11 7
641 154.95 radiation 1 43200 > th dose independent sin 21 NA
642 154.95 humidity 80 43200 < th dose independent rect. 14 4
644 154.95 radiation 1 43200 < th dose independent rect. 13 8
679 154.98 radiation 1 43200 < th dose independent rect. 13 15
694 155.00 radiation 1 43200 < th dose independent rect. 13 22
717 155.04 atmosphere 1010 43200 > th dose independent rect. 14 18
727 155.06 atmosphere 1010 43200 > th dose independent rect. 22 9
770 155.09 radiation 1 43200 < th dose independent no NA NA
783 155.09 atmosphere 1010 43200 > th dose independent rect. 14 22
789 155.09 radiation 1 43200 < th dose independent rect. 20 23
820 155.13 atmosphere 1010 43200 > th dose independent rect. 22 14
827 155.14 atmosphere 1010 43200 > th dose independent rect. 22 20
829 155.14 atmosphere 1010 43200 > th dose independent rect. 10 22
832 155.15 atmosphere 1010 43200 > th dose independent rect. 2 10
860 155.16 atmosphere 1010 43200 > th dose independent rect. 22 22
874 155.18 atmosphere 1010 43200 > th dose independent rect. 19 12
878 155.18 atmosphere 1010 43200 > th dose independent rect. 2 16
887 155.19 atmosphere 1010 43200 > th dose independent rect. 17 1
915 155.20 atmosphere 1010 43200 > th dose independent rect. 19 23
917 155.20 radiation 1 43200 < th dose independent rect. 10 23
918 155.21 atmosphere 1010 43200 > th dose independent sin 8 NA
932 155.21 atmosphere 1010 43200 > th dose independent rect. 19 17
937 155.21 atmosphere 1010 43200 > th dose independent rect. 3 21
944 155.22 atmosphere 1010 43200 > th dose independent rect. 22 2
963 155.23 atmosphere 1010 43200 > th dose independent no NA NA
964 155.23 atmosphere 1010 43200 > th dose independent rect. 15 3