Os01g0677400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os01g0677400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 136.18 | 0.548 | 2.93 | -0.0913 | 0.542 | 0.43 | 3.13 | 2.7 | 0.0692 | 13.8 | 7.003 | 230 | -- | -- |
| 138.8 | 0.549 | 2.93 | -0.00712 | 0.742 | 0.733 | 0.206 | -- | 0.101 | 15.2 | 9.999 | 458 | -- | -- |
| 140.99 | 0.553 | 2.92 | -0.00864 | 0.196 | 0.276 | -- | 0.165 | 0.102 | 14.4 | 67.27 | 462 | -- | -- |
| 138.94 | 0.549 | 2.92 | -0.0243 | 0.74 | 0.753 | -- | -- | 0.114 | 15.3 | 9.671 | 455 | -- | -- |
| 139.57 | 0.55 | 2.91 | -0.0329 | -- | 0.279 | -- | 0.272 | 0.12 | -- | 58.72 | 2774 | -- | -- |
| 141.64 | 0.558 | 2.93 | -0.0122 | 0.0215 | -- | -0.534 | -- | 0.0712 | 6.06 | -- | -- | -- | -- |
| 142.19 | 0.558 | 2.92 | -0.0157 | 0.052 | -- | -- | -- | 0.0738 | 10.7 | -- | -- | -- | -- |
| 139.68 | 0.55 | 2.91 | -0.0119 | -- | 0.31 | -- | -- | 0.13 | -- | 10 | 1396 | -- | -- |
| 138.9 | 0.549 | 2.92 | -- | 0.794 | 0.809 | -- | -- | 0.121 | 15.4 | 9.465 | 462 | -- | -- |
| 142.36 | 0.558 | 2.92 | -0.0166 | -- | -- | -- | -- | 0.0736 | -- | -- | -- | -- | -- |
| 142.2 | 0.558 | 2.92 | -- | 0.0521 | -- | -- | -- | 0.0756 | 10.7 | -- | -- | -- | -- |
| 138.57 | 0.548 | 2.91 | -- | -- | 0.406 | -- | -- | 0.156 | -- | 8.915 | 2815 | -- | -- |
| 142.36 | 0.557 | 2.92 | -- | -- | -- | -- | -- | 0.0754 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 122.69 | wind | 9.0 | 90 | > th | dose dependent | rect. | 22 | 12 |
| 2 | 123.20 | wind | 9.0 | 90 | > th | dose independent | rect. | 22 | 12 |
| 3 | 124.02 | wind | 9.0 | 720 | > th | dose independent | rect. | 22 | 1 |
| 7 | 124.02 | wind | 9.0 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 96 | 124.35 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 17 | 1 |
| 97 | 124.35 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 17 | 1 |
| 98 | 124.38 | humidity | 90.0 | 10 | > th | dose independent | rect. | 17 | 1 |
| 108 | 124.38 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 120 | 124.75 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 1 |
| 148 | 124.75 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 228 | 129.00 | radiation | 1.0 | 90 | < th | dose independent | rect. | 16 | 1 |
| 242 | 129.63 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 8 | 11 |
| 315 | 130.65 | radiation | 1.0 | 90 | < th | dose independent | rect. | 16 | 3 |
| 317 | 130.72 | radiation | 1.0 | 90 | < th | dose independent | rect. | 13 | 6 |
| 318 | 130.74 | radiation | 1.0 | 90 | < th | dose independent | rect. | 11 | 8 |
| 319 | 130.75 | radiation | 1.0 | 90 | < th | dose independent | rect. | 9 | 10 |
| 387 | 131.06 | wind | 5.0 | 270 | > th | dose dependent | rect. | 20 | 4 |
| 446 | 131.69 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 14 | 4 |
| 448 | 131.73 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 16 | 3 |
| 457 | 131.83 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 17 | 3 |
| 528 | 132.42 | temperature | 25.0 | 90 | < th | dose independent | rect. | 16 | 3 |
| 532 | 132.46 | humidity | 90.0 | 10 | > th | dose independent | rect. | 8 | 11 |
| 551 | 132.67 | humidity | 90.0 | 30 | > th | dose independent | rect. | 6 | 13 |
| 590 | 132.96 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 11 | 8 |
| 592 | 132.97 | temperature | 25.0 | 90 | < th | dose independent | rect. | 16 | 1 |
| 593 | 132.97 | radiation | 1.0 | 90 | > th | dose independent | rect. | 8 | 23 |
| 594 | 132.97 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 8 | 11 |
| 616 | 133.11 | wind | 3.0 | 90 | < th | dose independent | rect. | 17 | 3 |
| 652 | 133.32 | wind | 5.0 | 90 | < th | dose dependent | rect. | 16 | 4 |
| 693 | 133.57 | wind | 5.0 | 90 | < th | dose independent | rect. | 16 | 17 |
| 714 | 133.68 | radiation | 1.0 | 90 | < th | dose independent | sin | 22 | NA |
| 723 | 133.71 | radiation | 1.0 | 90 | > th | dose independent | sin | 22 | NA |
| 762 | 133.86 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 16 | 17 |
| 776 | 133.90 | humidity | 90.0 | 270 | > th | dose independent | rect. | 14 | 1 |
| 783 | 133.91 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 14 | 1 |
| 817 | 134.08 | radiation | 1.0 | 90 | > th | dose independent | rect. | 9 | 10 |
| 865 | 134.21 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 16 | 3 |
| 879 | 134.27 | radiation | 10.0 | 270 | < th | dose independent | rect. | 14 | 17 |
| 892 | 134.32 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 14 | 18 |
| 956 | 134.43 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 17 | 15 |
| 960 | 134.44 | humidity | 70.0 | 90 | > th | dose independent | rect. | 16 | 17 |