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Os01g0676200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.4 (0.028) R2 : 0.816
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.61 (0.0894) R2dC : 0.203 R2C : 0.458
β3 : -2.69 (0.136) R2dE : 0.26 R2E : 0.552
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.572 (0.0602) R2dN8 : 0.0507 R2N8 : 0.0892
σ : 0.518
deviance : 123.58
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_____
C
peak time of C : 17.5
E
wheather : temperature
threshold : 15.07
memory length : 195
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 3.88
open length of G : 3.18

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
113.75 0.501 12.4 0.346 1.46 -2.51 1.03 5.88 -0.499 17.2 16.03 269 3.02 4.03
130.01 0.531 12.4 0.0552 1.37 -2.68 -0.387 -- -0.628 17 14.38 225 3.29 4.13
115.84 0.501 12.4 0.329 1.51 -2.48 -- 5.7 -0.482 17.2 16.64 263 3.07 4.05
123.59 0.518 12.4 -0.0733 1.62 -2.69 -- -- -0.528 17.4 15.46 198 3.89 3.13
165.08 0.598 12.4 0.178 -- -3.5 -- 3.15 -0.392 -- 12.02 265 2.48 4.66
221.32 0.697 12.5 -0.19 2.69 -- -1.06 -- -0.905 18 -- -- -- --
224.04 0.701 12.5 -0.18 2.69 -- -- -- -0.908 18 -- -- -- --
168.09 0.604 12.4 -0.0276 -- -3.55 -- -- -0.488 -- 9.756 282 2.31 4.71
123.58 0.518 12.4 -- 1.61 -2.69 -- -- -0.572 17.5 15.07 195 3.88 3.18
598.28 1.14 12.5 -0.26 -- -- -- -- -0.97 -- -- -- -- --
224.9 0.702 12.5 -- 2.69 -- -- -- -0.888 18 -- -- -- --
162.39 0.594 12.4 -- -- -3.25 -- -- -0.591 -- -7.177 352 1.05 5.98
600.06 1.14 12.5 -- -- -- -- -- -0.941 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 114.43 temperature 15.0 270 > th dose dependent rect. 3 4
7 121.97 atmosphere 995.0 270 > th dose dependent rect. 3 4
9 123.00 temperature 20.0 270 > th dose independent rect. 4 3
13 125.73 temperature 25.0 10 > th dose independent rect. 5 4
16 126.41 temperature 20.0 10 > th dose dependent rect. 5 4
21 128.88 atmosphere 1000.0 30 > th dose independent rect. 7 23
23 129.13 radiation 1.0 90 > th dose independent rect. 18 13
37 130.49 radiation 1.0 90 > th dose independent rect. 5 2
53 131.25 radiation 20.0 90 < th dose independent rect. 5 4
56 132.47 humidity 70.0 10 > th dose dependent rect. 6 1
57 132.59 radiation 10.0 270 < th dose independent rect. 3 4
63 132.93 radiation 1.0 90 < th dose dependent sin 10 NA
68 133.17 temperature 20.0 10 > th dose independent rect. 6 1
70 133.21 wind 9.0 10 < th dose dependent rect. 6 1
74 133.28 radiation 40.0 10 < th dose dependent rect. 6 1
76 133.42 wind 5.0 10 < th dose independent rect. 6 1
79 133.42 temperature 10.0 10 > th dose independent rect. 6 1
81 133.42 temperature 30.0 10 < th dose independent rect. 6 1
82 133.42 humidity 50.0 10 > th dose independent rect. 6 1
85 133.42 atmosphere 995.0 10 > th dose independent rect. 6 1
86 133.42 atmosphere 1015.0 10 < th dose independent rect. 6 1
87 133.42 radiation 20.0 10 < th dose independent rect. 6 1
90 133.42 precipitation 0.1 10 < th dose independent rect. 6 1
91 133.42 temperature 10.0 10 > th dose independent rect. 7 23
92 133.42 precipitation 0.1 10 < th dose dependent rect. 6 1
95 133.52 radiation 1.0 10 > th dose independent rect. 6 1
103 133.97 atmosphere 995.0 10 > th dose dependent rect. 6 1
109 134.25 temperature 10.0 10 > th dose dependent rect. 6 1
111 134.29 radiation 1.0 90 > th dose independent sin 10 NA
117 134.51 wind 1.0 270 > th dose independent rect. 3 4
118 134.52 wind 1.0 10 > th dose independent rect. 6 1
121 134.57 precipitation 0.1 10 < th dose independent rect. 7 23
122 134.57 precipitation 0.1 10 < th dose dependent rect. 7 23
125 134.63 temperature 30.0 10 < th dose dependent rect. 6 1
156 134.85 wind 9.0 270 < th dose independent rect. 7 20
161 135.00 humidity 90.0 10 < th dose independent rect. 6 1
167 135.09 precipitation 0.1 270 < th dose independent rect. 7 20
168 135.09 precipitation 0.1 270 < th dose dependent rect. 7 20
180 135.40 humidity 70.0 270 > th dose independent rect. 3 4
181 135.45 radiation 40.0 90 < th dose dependent rect. 5 4
185 135.58 wind 9.0 1440 < th dose independent rect. 7 1
186 135.58 temperature 10.0 1440 > th dose independent rect. 7 1
190 135.58 temperature 30.0 1440 < th dose independent rect. 7 1
194 135.58 humidity 50.0 1440 > th dose independent rect. 7 1
199 135.58 atmosphere 995.0 1440 > th dose independent rect. 7 1
200 135.58 atmosphere 1015.0 1440 < th dose independent rect. 7 1
201 135.58 temperature 10.0 1440 > th dose independent rect. 8 23
206 135.69 precipitation 0.1 270 < th dose independent rect. 3 4
207 135.69 precipitation 0.1 270 < th dose dependent rect. 3 4
214 135.83 radiation 1.0 30 > th dose dependent rect. 6 1
217 135.87 atmosphere 1000.0 270 > th dose independent rect. 3 4
219 135.92 radiation 1.0 90 < th dose independent sin 10 NA
222 136.13 wind 7.0 270 < th dose independent rect. 3 4
230 136.44 temperature 10.0 270 > th dose independent rect. 3 4
232 136.44 temperature 30.0 270 < th dose independent rect. 3 4
233 136.44 humidity 50.0 270 > th dose independent rect. 3 4
236 136.44 atmosphere 1015.0 270 < th dose independent rect. 3 4
238 136.44 temperature 10.0 270 > th dose independent rect. 7 20
244 137.10 radiation 40.0 270 < th dose dependent rect. 3 4
246 137.13 atmosphere 1015.0 10 < th dose dependent rect. 6 1
248 137.23 wind 9.0 10 < th dose independent rect. 7 23
249 137.24 radiation 40.0 270 < th dose dependent rect. 15 16
250 137.28 radiation 20.0 270 < th dose independent rect. 15 16
258 137.47 humidity 70.0 90 > th dose independent rect. 5 4
263 137.78 radiation 20.0 10 < th dose independent rect. 6 3
281 138.81 radiation 1.0 30 > th dose dependent rect. 18 13
283 138.85 humidity 90.0 10 < th dose dependent rect. 6 1
323 139.63 radiation 40.0 10 < th dose dependent rect. 6 3
334 140.41 humidity 50.0 270 > th dose dependent rect. 3 4
335 140.46 wind 3.0 10 < th dose independent rect. 6 3
341 140.56 radiation 30.0 270 < th dose dependent rect. 3 6
353 140.60 radiation 20.0 270 < th dose independent rect. 2 7
357 140.67 temperature 10.0 270 > th dose dependent rect. 20 7
358 140.87 atmosphere 1000.0 90 > th dose independent rect. 5 4
365 141.29 humidity 50.0 90 > th dose dependent rect. 5 4
376 141.99 radiation 40.0 90 < th dose dependent rect. 5 6
378 142.08 wind 5.0 90 < th dose independent rect. 5 4
385 142.30 atmosphere 1005.0 10 > th dose independent rect. 6 3
389 142.38 temperature 30.0 90 < th dose independent rect. 5 4
390 142.38 wind 9.0 90 < th dose dependent rect. 5 4
402 142.63 wind 9.0 90 < th dose independent rect. 9 20
403 142.71 humidity 90.0 10 < th dose independent rect. 6 3
407 142.76 precipitation 0.1 90 < th dose independent rect. 9 20
408 142.76 precipitation 0.1 90 < th dose dependent rect. 9 20
411 142.83 wind 9.0 270 < th dose dependent rect. 3 4
416 143.12 precipitation 0.1 90 < th dose independent rect. 5 4
417 143.12 precipitation 0.1 90 < th dose dependent rect. 5 4
421 143.23 wind 9.0 270 < th dose independent rect. 7 9
424 143.26 temperature 10.0 90 > th dose independent rect. 5 4
428 143.26 atmosphere 1015.0 90 < th dose independent rect. 5 4
429 143.26 temperature 10.0 90 > th dose independent rect. 9 20
461 143.87 radiation 20.0 90 < th dose independent rect. 5 17
463 143.94 wind 1.0 90 > th dose independent rect. 5 4
475 144.21 precipitation 0.1 270 < th dose independent rect. 7 9
476 144.21 precipitation 0.1 270 < th dose dependent rect. 7 9
477 144.22 wind 1.0 30 > th dose dependent rect. 6 1
496 144.32 temperature 10.0 270 > th dose independent rect. 7 9
497 144.32 atmosphere 1015.0 270 < th dose independent rect. 7 9
498 144.32 temperature 10.0 270 > th dose independent rect. 16 15
509 144.56 atmosphere 995.0 270 > th dose independent rect. 16 15
514 144.68 atmosphere 995.0 270 > th dose independent rect. 7 20
527 145.22 humidity 50.0 30 > th dose independent rect. 7 23
539 145.28 atmosphere 1015.0 270 < th dose independent rect. 7 20
543 145.41 humidity 50.0 270 > th dose independent rect. 7 20
562 145.86 radiation 40.0 90 < th dose dependent rect. 5 18
567 145.97 radiation 40.0 90 < th dose dependent rect. 5 16
568 145.97 temperature 10.0 30 > th dose dependent rect. 9 20
570 145.99 wind 5.0 10 < th dose dependent rect. 6 3
600 146.24 temperature 10.0 270 > th dose dependent rect. 21 5
605 146.29 radiation 1.0 90 < th dose dependent rect. 21 14
608 146.33 wind 9.0 270 < th dose independent rect. 16 15
610 146.35 radiation 1.0 90 < th dose dependent rect. 21 11
626 146.71 radiation 10.0 270 < th dose dependent rect. 5 1
683 147.48 atmosphere 995.0 270 > th dose independent rect. 7 8
685 147.50 wind 7.0 90 < th dose independent rect. 21 8
702 147.66 precipitation 0.1 270 < th dose independent rect. 16 15
703 147.66 precipitation 0.1 270 < th dose dependent rect. 16 15
717 147.94 radiation 40.0 10 < th dose dependent rect. 6 16
738 148.19 wind 1.0 270 > th dose independent rect. 7 20
741 148.27 atmosphere 995.0 90 > th dose independent rect. 9 20
768 148.60 radiation 40.0 270 < th dose dependent rect. 3 15
776 148.76 atmosphere 1015.0 90 < th dose independent rect. 7 22
791 148.91 temperature 10.0 90 > th dose independent rect. 21 8
792 148.91 temperature 30.0 90 < th dose independent rect. 21 8
793 148.91 humidity 50.0 90 > th dose independent rect. 21 8
796 148.91 atmosphere 995.0 90 > th dose independent rect. 21 8
797 148.91 radiation 20.0 90 < th dose independent rect. 21 8
800 148.91 temperature 10.0 90 > th dose independent rect. 5 16
801 148.91 atmosphere 1015.0 90 < th dose independent rect. 5 16
803 149.00 radiation 40.0 90 < th dose dependent rect. 21 8
815 149.03 wind 1.0 90 > th dose independent rect. 9 20
830 149.10 radiation 1.0 90 < th dose independent rect. 21 10
841 149.27 radiation 1.0 90 < th dose independent rect. 21 8
855 149.42 precipitation 0.1 270 < th dose independent rect. 20 7
856 149.42 precipitation 0.1 270 < th dose dependent rect. 20 7
863 149.49 temperature 30.0 270 < th dose independent rect. 2 7
880 149.54 radiation 1.0 90 < th dose independent rect. 21 14
913 149.76 temperature 10.0 270 > th dose independent rect. 3 17
914 149.76 atmosphere 1015.0 270 < th dose independent rect. 3 17
934 149.98 radiation 20.0 10 < th dose independent rect. 6 16
946 150.17 atmosphere 1015.0 90 < th dose independent rect. 9 20
969 150.33 wind 1.0 270 > th dose independent rect. 7 8
985 150.43 wind 9.0 270 < th dose dependent rect. 20 7