Os01g0675800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : No apical meristem (NAM) protein domain containing protein.
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Os01g0675800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : No apical meristem (NAM) protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 174.44 | 0.621 | 6.65 | 2.3 | 1.08 | 0.658 | 0.64 | -0.357 | -2.36 | 7.76 | 24.7 | 237 | -- | -- |
| 174.82 | 0.616 | 6.66 | 2.19 | 1.09 | 0.637 | 0.56 | -- | -2.39 | 7.77 | 24.69 | 226 | -- | -- |
| 175.49 | 0.617 | 6.65 | 2.28 | 1.09 | 0.648 | -- | -0.244 | -2.37 | 7.71 | 24.63 | 226 | -- | -- |
| 175.7 | 0.617 | 6.66 | 2.2 | 1.1 | 0.634 | -- | -- | -2.4 | 7.7 | 24.65 | 226 | -- | -- |
| 217.96 | 0.688 | 6.63 | 2.74 | -- | 1.07 | -- | -1.09 | -2.16 | -- | 25.07 | 363 | -- | -- |
| 196.63 | 0.657 | 6.73 | 1.99 | 1.39 | -- | 0.585 | -- | -2.73 | 6.97 | -- | -- | -- | -- |
| 197.5 | 0.658 | 6.73 | 2 | 1.39 | -- | -- | -- | -2.73 | 6.93 | -- | -- | -- | -- |
| 216.55 | 0.685 | 6.64 | 2.34 | -- | 1.13 | -- | -- | -2.2 | -- | 25.08 | 369 | -- | -- |
| 297.75 | 0.804 | 6.74 | -- | 1.22 | 0.332 | -- | -- | -2.77 | 7.23 | 24.8 | 216 | -- | -- |
| 299.24 | 0.808 | 6.76 | 2.03 | -- | -- | -- | -- | -2.7 | -- | -- | -- | -- | -- |
| 303.2 | 0.815 | 6.78 | -- | 1.42 | -- | -- | -- | -2.95 | 6.84 | -- | -- | -- | -- |
| 357.4 | 0.88 | 6.71 | -- | -- | 0.888 | -- | -- | -2.54 | -- | 25.1 | 382 | -- | -- |
| 408.14 | 0.943 | 6.81 | -- | -- | -- | -- | -- | -2.93 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 164.56 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 19 |
| 7 | 166.79 | temperature | 15 | 90 | > th | dose dependent | rect. | 22 | 16 |
| 15 | 167.52 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 8 |
| 21 | 168.03 | temperature | 25 | 270 | < th | dose independent | sin | 7 | NA |
| 47 | 169.17 | temperature | 25 | 270 | > th | dose independent | rect. | 17 | 21 |
| 50 | 169.30 | temperature | 25 | 270 | > th | dose independent | rect. | 22 | 15 |
| 58 | 169.54 | temperature | 25 | 270 | > th | dose independent | rect. | 18 | 19 |
| 68 | 169.77 | temperature | 25 | 270 | > th | dose independent | sin | 7 | NA |
| 77 | 170.07 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 19 |
| 85 | 170.24 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 8 |
| 95 | 170.65 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 12 |
| 222 | 172.97 | temperature | 25 | 270 | < th | dose independent | rect. | 11 | 22 |
| 250 | 173.37 | temperature | 10 | 270 | > th | dose dependent | rect. | 8 | 17 |
| 268 | 173.63 | temperature | 25 | 270 | < th | dose independent | rect. | 13 | 21 |
| 297 | 173.92 | temperature | 25 | 270 | > th | dose dependent | sin | 9 | NA |
| 303 | 174.01 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 7 |
| 357 | 174.73 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 20 |
| 367 | 174.83 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 18 |
| 500 | 175.80 | temperature | 25 | 270 | < th | dose independent | no | NA | NA |
| 563 | 176.21 | temperature | 30 | 270 | < th | dose dependent | sin | 7 | NA |
| 646 | 176.66 | temperature | 25 | 270 | > th | dose independent | rect. | 3 | 23 |
| 653 | 176.68 | temperature | 25 | 270 | > th | dose independent | no | NA | NA |
| 669 | 176.75 | temperature | 25 | 270 | > th | dose independent | rect. | 8 | 23 |
| 717 | 177.07 | temperature | 25 | 270 | > th | dose independent | rect. | 22 | 23 |
| 782 | 177.32 | temperature | 25 | 270 | > th | dose independent | rect. | 1 | 23 |
| 837 | 177.63 | temperature | 10 | 30 | > th | dose dependent | rect. | 6 | 23 |
| 842 | 177.66 | temperature | 30 | 90 | < th | dose dependent | sin | 2 | NA |
| 853 | 177.72 | atmosphere | 1010 | 10 | < th | dose independent | rect. | 22 | 16 |
| 858 | 177.73 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 13 | 8 |
| 951 | 178.19 | temperature | 10 | 10 | > th | dose dependent | rect. | 9 | 18 |