Os01g0672500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 48 protein.
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Os01g0672500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 48 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.81 | 0.384 | 10.8 | 2.35 | 1.1 | -1.53 | 0.444 | 5.39 | 0.154 | 14 | 22.29 | 1873 | -- | -- |
| 77.04 | 0.409 | 10.9 | 1.5 | 0.997 | -1.72 | 0.27 | -- | 0.0492 | 13 | 15.14 | 8491 | -- | -- |
| 67.54 | 0.383 | 10.8 | 2.37 | 1.1 | -1.54 | -- | 5.44 | 0.158 | 13.9 | 22.4 | 1872 | -- | -- |
| 75.47 | 0.405 | 10.9 | 1.31 | 1.05 | -1.7 | -- | -- | -0.0424 | 13.5 | 13.53 | 7782 | -- | -- |
| 112.86 | 0.495 | 10.8 | 2.48 | -- | -2.02 | -- | 6.55 | 0.152 | -- | 23.64 | 1100 | -- | -- |
| 122.46 | 0.519 | 11 | 0.42 | 1.1 | -- | 0.319 | -- | -0.517 | 13.3 | -- | -- | -- | -- |
| 122.87 | 0.519 | 11 | 0.43 | 1.1 | -- | -- | -- | -0.516 | 13.3 | -- | -- | -- | -- |
| 138.38 | 0.548 | 10.9 | 1.33 | -- | -1.88 | -- | -- | -0.0547 | -- | 12.3 | 6804 | -- | -- |
| 100.03 | 0.466 | 11 | -- | 1 | -0.849 | -- | -- | -0.459 | 13.2 | 22.6 | 5536 | -- | -- |
| 198.04 | 0.658 | 11 | 0.387 | -- | -- | -- | -- | -0.538 | -- | -- | -- | -- | -- |
| 127.74 | 0.529 | 11 | -- | 1.1 | -- | -- | -- | -0.563 | 13.3 | -- | -- | -- | -- |
| 147.32 | 0.565 | 11 | -- | -- | -1.25 | -- | -- | -0.447 | -- | 24.13 | 1093 | -- | -- |
| 202 | 0.663 | 11 | -- | -- | -- | -- | -- | -0.581 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.27 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 2 | 65.32 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 3 | 66.78 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 4 | 66.91 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 8 | 67.60 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 19 | 67.80 | temperature | 25 | 4320 | < th | dose independent | rect. | 16 | 3 |
| 20 | 67.87 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 23 | 68.26 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 25 | 68.30 | wind | 3 | 43200 | > th | dose dependent | rect. | 9 | 7 |
| 26 | 68.33 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 7 |
| 29 | 68.40 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 31 | 68.50 | humidity | 90 | 43200 | < th | dose independent | rect. | 19 | 4 |
| 32 | 68.50 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 8 |
| 36 | 68.54 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 42 | 68.79 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 10 |
| 44 | 68.83 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 46 | 68.86 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 71 | 68.99 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 82 | 69.11 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 87 | 69.16 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 12 |
| 88 | 69.16 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 10 |
| 90 | 69.19 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 13 |
| 96 | 69.25 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 13 |
| 97 | 69.26 | wind | 5 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 99 | 69.30 | wind | 5 | 43200 | > th | dose dependent | rect. | 9 | 12 |
| 106 | 69.34 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 12 |
| 108 | 69.35 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 13 |
| 115 | 69.40 | wind | 3 | 43200 | > th | dose dependent | rect. | 5 | 12 |
| 117 | 69.43 | wind | 5 | 43200 | < th | dose independent | sin | 23 | NA |
| 127 | 69.48 | wind | 5 | 43200 | > th | dose independent | sin | 22 | NA |
| 133 | 69.53 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 151 | 69.62 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 16 |
| 170 | 69.67 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 3 |
| 174 | 69.68 | wind | 5 | 43200 | > th | dose dependent | sin | 22 | NA |
| 177 | 69.69 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 13 |
| 189 | 69.72 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 193 | 69.73 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 16 |
| 197 | 69.74 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 16 |
| 209 | 69.78 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 229 | 69.84 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 6 |
| 267 | 69.96 | radiation | 1 | 1440 | < th | dose dependent | rect. | 16 | 14 |
| 273 | 69.98 | temperature | 25 | 1440 | > th | dose dependent | sin | 20 | NA |
| 342 | 70.13 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 7 |
| 394 | 70.28 | radiation | 1 | 14400 | < th | dose dependent | rect. | 21 | 8 |
| 448 | 70.43 | wind | 9 | 43200 | < th | dose dependent | rect. | 9 | 6 |
| 489 | 70.52 | temperature | 25 | 4320 | > th | dose independent | sin | 0 | NA |
| 537 | 70.62 | temperature | 25 | 4320 | < th | dose independent | sin | 0 | NA |
| 538 | 70.62 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 587 | 70.72 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 22 |
| 618 | 70.79 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 677 | 70.87 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 16 | 3 |
| 687 | 70.88 | temperature | 20 | 720 | > th | dose dependent | rect. | 13 | 23 |
| 696 | 70.90 | wind | 7 | 43200 | < th | dose independent | rect. | 24 | 17 |
| 704 | 70.91 | radiation | 1 | 1440 | < th | dose dependent | sin | 13 | NA |
| 709 | 70.93 | temperature | 25 | 4320 | > th | dose independent | rect. | 9 | 3 |
| 714 | 70.93 | wind | 9 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 731 | 70.97 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 17 |
| 769 | 71.03 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 16 | 3 |
| 782 | 71.05 | temperature | 25 | 4320 | < th | dose independent | rect. | 9 | 3 |
| 791 | 71.06 | wind | 7 | 43200 | < th | dose independent | rect. | 24 | 21 |
| 804 | 71.07 | wind | 1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 836 | 71.12 | temperature | 25 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 878 | 71.16 | humidity | 80 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 880 | 71.16 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 20 |
| 915 | 71.22 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 21 |
| 916 | 71.22 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 975 | 71.29 | radiation | 40 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 978 | 71.29 | radiation | 40 | 43200 | > th | dose dependent | rect. | 10 | 1 |