Os01g0670200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0670200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 170.27 | 0.613 | 4.84 | 1.18 | 1.5 | -0.0733 | 1.34 | -3.43 | -0.154 | 20.5 | 24.6 | 1766 | -- | -- |
| 184.63 | 0.638 | 4.96 | 0.184 | 1.53 | -0.158 | 1.48 | -- | -0.438 | 20.6 | 22.35 | 23342 | -- | -- |
| 175.7 | 0.617 | 4.85 | 1.16 | 1.5 | -0.0697 | -- | -3.39 | -0.157 | 20.5 | 24.6 | 1898 | -- | -- |
| 186.44 | 0.636 | 4.97 | -0.0469 | 1.56 | -0.347 | -- | -- | -0.486 | 20.5 | 33.4 | 39200 | -- | -- |
| 295.21 | 0.8 | 4.82 | 1.25 | -- | -0.392 | -- | -3.87 | -0.247 | -- | 24.5 | 2156 | -- | -- |
| 186.09 | 0.64 | 4.94 | 0.233 | 1.5 | -- | 1.49 | -- | -0.39 | 20.4 | -- | -- | -- | -- |
| 193.08 | 0.651 | 4.94 | 0.185 | 1.49 | -- | -- | -- | -0.39 | 20.5 | -- | -- | -- | -- |
| 309.3 | 0.819 | 4.93 | -0.115 | -- | -0.442 | -- | -- | -0.513 | -- | 33.7 | 39431 | -- | -- |
| 186.2 | 0.636 | 4.97 | -- | 1.49 | -0.373 | -- | -- | -0.51 | 20.5 | 33.3 | 39242 | -- | -- |
| 318.19 | 0.834 | 4.91 | 0.179 | -- | -- | -- | -- | -0.405 | -- | -- | -- | -- | -- |
| 193.98 | 0.652 | 4.95 | -- | 1.49 | -- | -- | -- | -0.411 | 20.5 | -- | -- | -- | -- |
| 309.95 | 0.82 | 4.93 | -- | -- | -0.412 | -- | -- | -0.53 | -- | 33.4 | 39455 | -- | -- |
| 319.04 | 0.834 | 4.91 | -- | -- | -- | -- | -- | -0.425 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 167.06 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 18 | 9 |
| 2 | 167.67 | temperature | 20.0 | 90 | > th | dose independent | rect. | 21 | 7 |
| 4 | 168.45 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 6 | 168.57 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 8 | 168.67 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 23 | 20 |
| 12 | 168.79 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 21 | 7 |
| 13 | 168.86 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 18 | 168.99 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 5 |
| 23 | 169.09 | temperature | 20.0 | 30 | > th | dose independent | rect. | 4 | 14 |
| 25 | 169.13 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 20 | 6 |
| 26 | 169.13 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 20 | 6 |
| 33 | 169.28 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 4 | 18 |
| 41 | 169.40 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 7 | 7 |
| 52 | 169.43 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 20 | 18 |
| 58 | 169.45 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 9 | 5 |
| 94 | 169.51 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 4 | 14 |
| 153 | 170.01 | humidity | 50.0 | 14400 | > th | dose independent | sin | 6 | NA |
| 154 | 170.03 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 2 | 7 |
| 166 | 170.07 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 7 |
| 184 | 170.08 | humidity | 50.0 | 14400 | < th | dose independent | sin | 7 | NA |
| 216 | 170.15 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 221 | 170.16 | temperature | 25.0 | 270 | < th | dose dependent | sin | 5 | NA |
| 226 | 170.18 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 15 | 21 |
| 234 | 170.23 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 241 | 170.27 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 2 | 20 |
| 247 | 170.34 | temperature | 20.0 | 10 | > th | dose dependent | sin | 5 | NA |
| 269 | 170.42 | temperature | 20.0 | 90 | < th | dose independent | sin | 2 | NA |
| 278 | 170.45 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 9 | 21 |
| 292 | 170.56 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 17 | 13 |
| 293 | 170.58 | temperature | 20.0 | 90 | > th | dose independent | rect. | 4 | 17 |
| 353 | 170.89 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 354 | 170.90 | temperature | 20.0 | 30 | > th | dose independent | sin | 2 | NA |
| 358 | 170.91 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 369 | 170.94 | humidity | 90.0 | 10 | < th | dose independent | rect. | 3 | 15 |
| 373 | 170.95 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 7 | 23 |
| 386 | 171.02 | temperature | 25.0 | 270 | < th | dose dependent | no | NA | NA |
| 390 | 171.03 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 14 | 8 |
| 392 | 171.03 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 13 | 17 |
| 462 | 171.20 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 479 | 171.24 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 13 | 23 |
| 494 | 171.31 | temperature | 25.0 | 1440 | < th | dose independent | sin | 16 | NA |
| 496 | 171.31 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 8 | 6 |
| 506 | 171.35 | temperature | 20.0 | 90 | < th | dose independent | rect. | 5 | 10 |
| 509 | 171.35 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 18 | 23 |
| 541 | 171.42 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 7 | 14 |
| 593 | 171.43 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 595 | 171.44 | humidity | 50.0 | 14400 | > th | dose independent | no | NA | NA |
| 665 | 171.48 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 10 | 23 |
| 768 | 171.61 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 24 | 15 |
| 772 | 171.62 | humidity | 60.0 | 14400 | < th | dose dependent | sin | 7 | NA |
| 790 | 171.65 | humidity | 50.0 | 14400 | < th | dose independent | no | NA | NA |
| 893 | 171.65 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 10 | 23 |
| 994 | 171.71 | temperature | 20.0 | 270 | < th | dose independent | rect. | 3 | 12 |