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Os01g0670100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Curculin-like (mannose-binding) lectin domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.65 (0.0538) R2 : 0.621
β1 : 1.99 (0.24) R2dD : 0.0996 R2D : 0.113
β2 : 2.51 (0.132) R2dC : 0.299 R2C : 0.303
β3 : 4.9 (0.319) R2dE : 0.344 R2E : -0.00572
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 8.06 (1.12) R2dD*E : 0.108 R2D*E : -0.00686
γ1 : 0.444 (0.115) R2dN8 : 0.0187 R2N8 : -0.0334
σ : 0.947
deviance : 413.52
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C
peak time of C : 18
E
wheather : radiation
threshold : 1.371
memory length : 1428
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 8.09
open length of G : 22

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
399.64 0.939 6.65 2.04 2.49 4.9 2.43 8.01 0.439 17.9 1.237 1429 8.07 22.1
423.67 0.959 6.62 2.8 2.5 3.56 1.48 -- 0.531 17.4 3.117 1452 8.65 21.6
413.52 0.947 6.65 1.99 2.51 4.9 -- 8.06 0.444 18 1.371 1428 8.09 22
434.82 0.971 6.61 2.62 2.52 3.1 -- -- 0.509 17.6 3.948 1442 8.97 21.3
734.18 1.26 6.63 1.9 -- 5 -- 8.24 0.384 -- 1.643 1436 8.15 22
604.33 1.15 6.63 2.26 2.54 -- 2.86 -- 0.132 17.6 -- -- -- --
623.92 1.17 6.63 2.24 2.56 -- -- -- 0.143 17.7 -- -- -- --
754.25 1.28 6.52 2.52 -- 3.26 -- -- 0.469 -- 3.428 1440 9.42 20.9
586.8 1.13 6.56 -- 2.48 3.08 -- -- 0.527 18 7.326 1428 9.93 20.3
964.22 1.45 6.59 2.16 -- -- -- -- 0.082 -- -- -- -- --
756.64 1.29 6.68 -- 2.53 -- -- -- -0.107 17.7 -- -- -- --
894.52 1.39 6.53 -- -- 3.16 -- -- 0.266 -- 6.984 1440 10.6 19.6
1087.66 1.54 6.64 -- -- -- -- -- -0.158 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 403.68 radiation 1 1440 < th dose dependent rect. 8 22
6 405.71 radiation 1 1440 < th dose independent rect. 11 19
11 406.66 radiation 1 1440 > th dose independent rect. 11 19
18 408.81 humidity 90 43200 > th dose dependent rect. 21 1
21 409.99 humidity 90 43200 > th dose independent rect. 21 1
31 412.06 humidity 90 43200 < th dose independent rect. 21 1
38 413.81 radiation 1 1440 < th dose dependent rect. 8 11
40 413.86 radiation 1 1440 < th dose dependent rect. 8 19
57 414.37 temperature 20 14400 > th dose dependent rect. 4 1
100 416.02 radiation 1 1440 < th dose dependent sin 16 NA
116 416.78 radiation 1 1440 < th dose dependent sin 21 NA
135 417.36 temperature 25 14400 > th dose independent rect. 18 6
138 417.40 temperature 25 14400 < th dose independent rect. 18 7
148 417.92 temperature 25 14400 < th dose independent rect. 17 9
188 418.86 temperature 25 14400 > th dose independent rect. 20 1
202 419.24 humidity 90 43200 < th dose independent rect. 17 11
206 419.32 temperature 25 14400 < th dose independent rect. 17 16
225 419.65 humidity 90 43200 > th dose independent rect. 18 4
231 419.70 temperature 25 14400 > th dose dependent rect. 9 1
238 419.92 temperature 25 14400 > th dose independent rect. 17 17
246 420.11 radiation 1 1440 < th dose independent sin 15 NA
248 420.15 temperature 25 14400 > th dose dependent rect. 15 21
251 420.16 temperature 25 14400 > th dose dependent rect. 20 17
253 420.18 temperature 25 14400 > th dose dependent rect. 17 20
257 420.23 radiation 1 1440 > th dose independent sin 15 NA
264 420.29 temperature 25 14400 > th dose dependent rect. 8 4
273 420.33 humidity 90 43200 < th dose independent rect. 20 5
314 420.65 humidity 90 43200 < th dose independent sin 14 NA
341 420.87 temperature 25 14400 > th dose dependent sin 6 NA
346 420.90 temperature 25 14400 > th dose dependent rect. 15 9
354 420.93 temperature 25 14400 > th dose dependent rect. 6 19
357 420.94 temperature 20 14400 > th dose dependent rect. 21 9
364 420.97 temperature 25 14400 > th dose dependent sin 14 NA
381 421.00 temperature 25 14400 > th dose dependent rect. 11 23
399 421.04 temperature 30 14400 < th dose independent rect. 13 2
412 421.06 temperature 25 14400 > th dose dependent no NA NA
430 421.12 radiation 1 1440 < th dose dependent rect. 5 14
461 421.23 radiation 1 1440 < th dose dependent rect. 5 22
496 421.35 radiation 1 1440 < th dose dependent rect. 5 20
511 421.41 temperature 25 14400 < th dose independent sin 12 NA
630 421.99 humidity 90 43200 > th dose dependent sin 17 NA
701 422.21 temperature 25 14400 > th dose independent sin 12 NA
723 422.28 radiation 1 1440 > th dose independent rect. 11 8
736 422.31 temperature 30 14400 > th dose independent rect. 13 2
768 422.41 humidity 90 43200 < th dose independent rect. 10 1
786 422.46 temperature 25 4320 < th dose independent rect. 8 2
793 422.50 temperature 25 4320 > th dose independent rect. 9 1
822 422.57 radiation 1 1440 < th dose dependent rect. 23 20
840 422.62 humidity 80 43200 > th dose independent rect. 11 3
841 422.64 humidity 90 43200 > th dose independent rect. 18 9
866 422.74 radiation 1 1440 < th dose dependent rect. 2 17
928 422.95 humidity 80 43200 > th dose dependent rect. 10 17
932 422.96 radiation 1 1440 < th dose dependent rect. 2 23
935 422.97 radiation 1 1440 < th dose dependent no NA NA
945 422.99 radiation 1 1440 < th dose independent rect. 11 8
960 423.06 temperature 20 14400 > th dose dependent rect. 21 1
991 423.14 radiation 1 1440 < th dose dependent rect. 11 23
992 423.15 radiation 1 1440 < th dose independent rect. 11 14