Os01g0668600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Curculin-like (mannose-binding) lectin domain containing protein.
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Os01g0668600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Curculin-like (mannose-binding) lectin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 182.58 | 0.635 | 6.27 | -0.00817 | 1.39 | 2.81 | -0.0798 | -1.68 | 1.09 | 23.7 | 20 | 4209 | -- | -- |
| 186.58 | 0.636 | 6.23 | 0.145 | 1.39 | 3.23 | -0.062 | -- | 1.1 | 23.8 | 20.1 | 4896 | -- | -- |
| 182.6 | 0.629 | 6.27 | -0.00231 | 1.39 | 2.81 | -- | -1.66 | 1.09 | 23.7 | 20.01 | 4184 | -- | -- |
| 175.07 | 0.616 | 6.23 | -0.397 | 1.38 | 3.57 | -- | -- | 1.02 | 23.9 | 19.2 | 7870 | -- | -- |
| 291.82 | 0.796 | 6.24 | 0.0673 | -- | 2.96 | -- | -1.4 | 1.07 | -- | 20.5 | 3778 | -- | -- |
| 359.99 | 0.889 | 6.01 | 2.17 | 1.45 | -- | -0.0779 | -- | 2 | 23.9 | -- | -- | -- | -- |
| 360.02 | 0.889 | 6.01 | 2.17 | 1.45 | -- | -- | -- | 2 | 23.9 | -- | -- | -- | -- |
| 290.47 | 0.794 | 6.22 | -0.524 | -- | 3.92 | -- | -- | 0.989 | -- | 19.35 | 8088 | -- | -- |
| 176.14 | 0.618 | 6.21 | -- | 1.38 | 3.52 | -- | -- | 1.14 | 23.9 | 19.11 | 7878 | -- | -- |
| 493.02 | 1.04 | 5.98 | 2.22 | -- | -- | -- | -- | 2.02 | -- | -- | -- | -- | -- |
| 484.22 | 1.03 | 6.07 | -- | 1.48 | -- | -- | -- | 1.76 | 0.022 | -- | -- | -- | -- |
| 294.55 | 0.799 | 6.18 | -- | -- | 3.63 | -- | -- | 1.13 | -- | 19.16 | 8029 | -- | -- |
| 622.47 | 1.16 | 6.04 | -- | -- | -- | -- | -- | 1.78 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 177.82 | temperature | 20 | 4320 | > th | dose independent | rect. | 17 | 18 |
| 2 | 178.07 | temperature | 20 | 4320 | > th | dose independent | rect. | 17 | 11 |
| 7 | 178.28 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 8 | 178.33 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 17 |
| 28 | 179.17 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 30 | 179.19 | temperature | 20 | 4320 | > th | dose independent | sin | 14 | NA |
| 54 | 179.64 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 68 | 179.96 | temperature | 20 | 4320 | < th | dose independent | rect. | 17 | 11 |
| 94 | 180.44 | temperature | 20 | 4320 | < th | dose independent | sin | 13 | NA |
| 108 | 180.64 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 195 | 181.95 | temperature | 25 | 4320 | < th | dose dependent | rect. | 20 | 2 |
| 225 | 182.41 | temperature | 20 | 4320 | > th | dose independent | rect. | 8 | 23 |
| 226 | 182.42 | temperature | 20 | 4320 | > th | dose independent | rect. | 1 | 23 |
| 246 | 182.70 | temperature | 20 | 4320 | > th | dose independent | no | NA | NA |
| 285 | 183.33 | temperature | 20 | 4320 | < th | dose independent | rect. | 1 | 23 |
| 286 | 183.34 | temperature | 20 | 4320 | > th | dose independent | rect. | 5 | 23 |
| 287 | 183.36 | temperature | 20 | 4320 | < th | dose independent | rect. | 8 | 23 |
| 301 | 183.56 | temperature | 20 | 4320 | < th | dose independent | no | NA | NA |
| 348 | 184.30 | temperature | 20 | 4320 | < th | dose independent | rect. | 5 | 23 |
| 350 | 184.33 | temperature | 20 | 4320 | < th | dose independent | rect. | 2 | 9 |
| 401 | 185.14 | humidity | 70 | 43200 | < th | dose dependent | rect. | 20 | 14 |
| 403 | 185.17 | temperature | 20 | 4320 | > th | dose independent | rect. | 2 | 9 |
| 419 | 185.41 | temperature | 20 | 4320 | > th | dose independent | rect. | 1 | 11 |
| 491 | 186.81 | humidity | 60 | 43200 | > th | dose independent | rect. | 20 | 14 |
| 565 | 188.10 | temperature | 20 | 4320 | < th | dose independent | rect. | 5 | 2 |
| 568 | 188.14 | temperature | 20 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 579 | 188.35 | humidity | 60 | 43200 | < th | dose independent | rect. | 20 | 14 |
| 589 | 188.50 | humidity | 60 | 43200 | < th | dose dependent | sin | 8 | NA |
| 619 | 188.98 | temperature | 15 | 4320 | > th | dose dependent | rect. | 20 | 3 |
| 626 | 189.10 | temperature | 25 | 4320 | < th | dose dependent | sin | 13 | NA |
| 657 | 189.53 | temperature | 25 | 4320 | < th | dose dependent | rect. | 19 | 17 |
| 692 | 189.86 | humidity | 60 | 43200 | < th | dose dependent | rect. | 19 | 19 |
| 786 | 190.73 | humidity | 60 | 43200 | > th | dose independent | rect. | 2 | 8 |
| 810 | 190.94 | humidity | 70 | 43200 | < th | dose dependent | rect. | 7 | 3 |
| 826 | 191.08 | humidity | 70 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 852 | 191.34 | humidity | 60 | 43200 | < th | dose independent | rect. | 6 | 4 |
| 866 | 191.44 | humidity | 60 | 43200 | < th | dose independent | rect. | 2 | 8 |
| 881 | 191.53 | humidity | 60 | 43200 | < th | dose dependent | rect. | 24 | 14 |
| 920 | 191.75 | humidity | 60 | 43200 | < th | dose independent | rect. | 4 | 6 |
| 924 | 191.76 | temperature | 25 | 4320 | < th | dose dependent | rect. | 10 | 20 |
| 979 | 192.15 | radiation | 1 | 14400 | < th | dose independent | rect. | 9 | 3 |