Os01g0668000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : CS domain containing protein.
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Os01g0668000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : CS domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.49 | 0.268 | 12.1 | 0.307 | 0.412 | -1.2 | -0.394 | -3.54 | 0.215 | 10.2 | 21.21 | 5646 | -- | -- |
| 37.47 | 0.285 | 12.2 | 0.125 | 0.398 | -0.184 | -0.442 | -- | 0.165 | 10.5 | 29.32 | 5753 | -- | -- |
| 33.04 | 0.268 | 12.1 | 0.26 | 0.415 | -1.28 | -- | -3.61 | 0.201 | 9.92 | 20.95 | 5810 | -- | -- |
| 37.92 | 0.287 | 12.2 | 0.122 | 0.412 | -0.172 | -- | -- | 0.162 | 9.89 | 47.12 | 5766 | -- | -- |
| 43.23 | 0.306 | 12.1 | 0.158 | -- | -2.01 | -- | -5.15 | 0.204 | -- | 19.7 | 5884 | -- | -- |
| 37.86 | 0.288 | 12.2 | 0.214 | 0.407 | -- | -0.4 | -- | 0.203 | 10.2 | -- | -- | -- | -- |
| 38.43 | 0.29 | 12.2 | 0.197 | 0.413 | -- | -- | -- | 0.201 | 9.84 | -- | -- | -- | -- |
| 47.71 | 0.322 | 12.2 | 0.276 | -- | 0.391 | -- | -- | 0.227 | -- | 16.48 | 2294 | -- | -- |
| 37.4 | 0.285 | 12.2 | -- | 0.418 | -0.243 | -- | -- | 0.106 | 9.9 | 90.1 | 32990 | -- | -- |
| 48.63 | 0.326 | 12.2 | 0.193 | -- | -- | -- | -- | 0.202 | -- | -- | -- | -- | -- |
| 39.45 | 0.294 | 12.2 | -- | 0.412 | -- | -- | -- | 0.179 | 9.8 | -- | -- | -- | -- |
| 47.8 | 0.322 | 12.2 | -- | -- | -0.227 | -- | -- | 0.112 | -- | 68.3 | 33210 | -- | -- |
| 49.61 | 0.329 | 12.2 | -- | -- | -- | -- | -- | 0.18 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.87 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 2 | 27.88 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 3 | 28.18 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 4 | 28.18 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 5 | 28.67 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 3 |
| 19 | 29.48 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 7 |
| 20 | 29.52 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 5 |
| 23 | 29.55 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 8 |
| 24 | 29.58 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 5 |
| 27 | 29.64 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 30 | 29.69 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 2 |
| 49 | 30.01 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 81 | 30.24 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 103 | 30.60 | wind | 1.0 | 720 | < th | dose independent | rect. | 23 | 1 |
| 105 | 30.62 | wind | 5.0 | 4320 | < th | dose independent | rect. | 24 | 1 |
| 120 | 30.86 | wind | 5.0 | 4320 | > th | dose independent | rect. | 24 | 1 |
| 126 | 30.89 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 18 | 7 |
| 127 | 30.91 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 19 | 2 |
| 130 | 30.94 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 24 | 8 |
| 131 | 30.95 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 18 | 5 |
| 165 | 31.26 | temperature | 20.0 | 30 | > th | dose independent | rect. | 1 | 5 |
| 177 | 31.34 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 179 | 31.37 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 187 | 31.42 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 196 | 31.43 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 24 | 8 |
| 197 | 31.44 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 206 | 31.50 | wind | 1.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 209 | 31.51 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 213 | 31.54 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 215 | 31.54 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 217 | 31.54 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 268 | 31.54 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 272 | 31.54 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 329 | 31.57 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 21 | 11 |
| 350 | 31.67 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 367 | 31.74 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 424 | 31.98 | wind | 5.0 | 4320 | < th | dose independent | rect. | 18 | 7 |
| 428 | 31.98 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 18 | 8 |
| 436 | 32.01 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 442 | 32.03 | wind | 5.0 | 4320 | > th | dose independent | rect. | 18 | 7 |
| 446 | 32.04 | wind | 1.0 | 270 | < th | dose independent | rect. | 23 | 3 |
| 464 | 32.08 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 506 | 32.17 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 539 | 32.25 | atmosphere | 1010.0 | 30 | < th | dose dependent | sin | 9 | NA |
| 540 | 32.26 | temperature | 20.0 | 270 | > th | dose independent | rect. | 23 | 7 |
| 547 | 32.27 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 559 | 32.29 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 567 | 32.30 | atmosphere | 1010.0 | 270 | < th | dose dependent | rect. | 22 | 8 |
| 605 | 32.36 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 606 | 32.37 | wind | 5.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 694 | 32.49 | wind | 7.0 | 4320 | > th | dose independent | sin | 15 | NA |
| 698 | 32.50 | wind | 1.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 721 | 32.52 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 733 | 32.54 | wind | 7.0 | 4320 | < th | dose independent | sin | 15 | NA |
| 746 | 32.56 | temperature | 20.0 | 30 | > th | dose independent | rect. | 22 | 8 |
| 773 | 32.59 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 17 | 14 |
| 824 | 32.64 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 17 | 14 |
| 852 | 32.66 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 7 |
| 865 | 32.67 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 18 | 10 |
| 879 | 32.68 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 7 |
| 892 | 32.69 | temperature | 20.0 | 4320 | < th | dose independent | sin | 13 | NA |
| 893 | 32.69 | wind | 5.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 931 | 32.72 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 939 | 32.72 | wind | 1.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 960 | 32.73 | atmosphere | 1010.0 | 270 | < th | dose dependent | rect. | 1 | 2 |
| 961 | 32.74 | temperature | 20.0 | 270 | > th | dose independent | sin | 10 | NA |
| 962 | 32.74 | temperature | 20.0 | 4320 | > th | dose independent | sin | 13 | NA |
| 968 | 32.74 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 7 |
| 979 | 32.75 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 994 | 32.76 | wind | 1.0 | 270 | < th | dose independent | rect. | 23 | 5 |