Os01g0667200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glyoxalase II.
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Os01g0667200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Glyoxalase II.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.07 | 0.332 | 10.9 | -0.162 | 1.14 | 0.706 | -0.295 | 0.885 | -0.13 | 19.2 | 58.53 | 4746 | -- | -- |
| 50.79 | 0.332 | 10.9 | -0.0781 | 1.19 | 0.754 | -0.342 | -- | -0.105 | 19.1 | 55.99 | 6125 | -- | -- |
| 50.3 | 0.33 | 10.9 | -0.156 | 1.14 | 0.706 | -- | 0.862 | -0.129 | 19.2 | 58.38 | 4740 | -- | -- |
| 50.81 | 0.332 | 10.9 | -0.0971 | 1.17 | 0.764 | -- | -- | -0.117 | 19.2 | 55.79 | 6134 | -- | -- |
| 116.33 | 0.502 | 10.8 | -0.187 | -- | 0.928 | -- | 0.791 | -0.126 | -- | 58 | 5020 | -- | -- |
| 60.69 | 0.365 | 10.9 | -0.0879 | 1.16 | -- | -0.227 | -- | -0.254 | 19.1 | -- | -- | -- | -- |
| 60.83 | 0.365 | 10.9 | -0.0832 | 1.16 | -- | -- | -- | -0.255 | 19.1 | -- | -- | -- | -- |
| 115.52 | 0.501 | 10.8 | -0.0568 | -- | 1.04 | -- | -- | -0.0949 | -- | 62 | 5037 | -- | -- |
| 51.02 | 0.333 | 10.8 | -- | 1.16 | 0.769 | -- | -- | -0.109 | 19.1 | 56 | 6125 | -- | -- |
| 132.34 | 0.538 | 10.9 | -0.105 | -- | -- | -- | -- | -0.275 | -- | -- | -- | -- | -- |
| 61.01 | 0.365 | 10.9 | -- | 1.16 | -- | -- | -- | -0.246 | 19.1 | -- | -- | -- | -- |
| 79.79 | 0.416 | 10.9 | -- | -- | 1.01 | -- | -- | -0.426 | -- | 72.13 | 547 | -- | -- |
| 132.63 | 0.538 | 10.9 | -- | -- | -- | -- | -- | -0.264 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.79 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 20 |
| 2 | 48.92 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 17 | 18 |
| 3 | 48.97 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 16 | 20 |
| 4 | 49.32 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 16 | 20 |
| 5 | 49.51 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 10 | 1 |
| 6 | 49.61 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 17 | 17 |
| 10 | 49.92 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 17 | 17 |
| 12 | 50.07 | humidity | 50.0 | 14400 | < th | dose independent | sin | 10 | NA |
| 15 | 50.11 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 19 | 17 |
| 30 | 50.25 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 18 | 15 |
| 32 | 50.27 | humidity | 50.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 34 | 50.37 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 18 | 15 |
| 53 | 50.47 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 10 | 2 |
| 54 | 50.47 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 19 | 18 |
| 58 | 50.49 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 8 | 5 |
| 73 | 50.50 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 7 | 6 |
| 78 | 50.50 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 22 | 15 |
| 103 | 50.58 | humidity | 70.0 | 4320 | < th | dose dependent | sin | 8 | NA |
| 105 | 50.60 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 118 | 50.77 | humidity | 60.0 | 4320 | > th | dose independent | sin | 7 | NA |
| 123 | 50.79 | humidity | 60.0 | 4320 | < th | dose independent | sin | 7 | NA |
| 167 | 51.00 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 173 | 51.03 | wind | 1.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 354 | 51.41 | humidity | 60.0 | 4320 | < th | dose dependent | no | NA | NA |
| 355 | 51.41 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 8 | 3 |
| 357 | 51.41 | humidity | 60.0 | 4320 | < th | dose dependent | rect. | 9 | 11 |
| 499 | 51.45 | humidity | 60.0 | 4320 | < th | dose dependent | sin | 22 | NA |
| 533 | 51.50 | wind | 1.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 601 | 51.55 | humidity | 60.0 | 4320 | < th | dose independent | no | NA | NA |
| 602 | 51.55 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 607 | 51.55 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 8 | 12 |
| 884 | 51.72 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 15 | 7 |