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Os01g0666600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.29 (0.0316) R2 : 0.943
β1 : -1.09 (0.117) R2dD : 0.0128 R2D : 0.011
β2 : 4.33 (0.152) R2dC : 0.355 R2C : 0.745
β3 : -3.7 (0.192) R2dE : 0.165 R2E : 0.573
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.683 (0.0681) R2dN8 : 0.0158 R2N8 : 0.00693
σ : 0.591
deviance : 160.78
__
_____
C
peak time of C : 7.15
E
wheather : temperature
threshold : 13.43
memory length : 310
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 13.8
open length of G : 7.22

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
151.8 0.579 9.24 -0.851 4.53 -3.71 3.08 5.55 -0.581 7.32 14.95 286 14 6.88
161.13 0.591 9.26 -1.17 4.53 -3.52 1.22 -- -0.66 7.25 12.44 286 14.1 6.67
162.8 0.594 9.3 -0.991 4.49 -3.7 -- 2.35 -0.675 7.23 15.88 282 14.1 7.38
160.78 0.591 9.29 -1.09 4.33 -3.7 -- -- -0.683 7.15 13.43 310 13.8 7.22
190.39 0.643 9.4 -1.22 -- -7.47 -- -0.371 -0.632 -- -55.26 508 10.5 9.19
285.49 0.792 9.25 -1.46 6.8 -- 1.56 -- -0.832 7.33 -- -- -- --
292.09 0.8 9.26 -1.43 6.8 -- -- -- -0.836 7.32 -- -- -- --
182.1 0.629 9.38 -1.09 -- -7.73 -- -- -0.574 -- -14.46 507 10.6 9.37
193.4 0.648 9.25 -- 4.12 -4.02 -- -- -0.514 7.16 13.93 323 13.6 7.5
2749.41 2.45 9.41 -1.31 -- -- -- -- -0.722 -- -- -- -- --
345.67 0.87 9.22 -- 6.79 -- -- -- -0.677 7.33 -- -- -- --
209.67 0.674 9.35 -- -- -7.86 -- -- -0.444 -- -5.871 498 10.6 9.62
2794.68 2.47 9.38 -- -- -- -- -- -0.577 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 152.65 temperature 15.0 270 > th dose dependent rect. 14 7
3 157.77 temperature 20.0 270 > th dose independent rect. 14 7
18 165.65 temperature 25.0 270 > th dose independent rect. 15 4
30 169.08 temperature 15.0 10 > th dose dependent rect. 16 7
49 173.51 temperature 10.0 270 > th dose dependent rect. 14 19
51 173.84 temperature 20.0 10 > th dose independent rect. 16 7
63 176.43 temperature 10.0 270 > th dose dependent rect. 15 17
70 177.54 humidity 90.0 270 < th dose independent rect. 15 4
137 186.24 temperature 30.0 270 < th dose dependent rect. 10 16
154 188.38 temperature 15.0 10 > th dose dependent rect. 16 18
183 190.39 wind 9.0 270 < th dose independent rect. 15 4
193 191.14 temperature 10.0 270 > th dose independent rect. 15 4
195 191.14 atmosphere 1010.0 270 < th dose independent rect. 15 4
197 191.14 temperature 10.0 270 > th dose independent rect. 19 20
198 191.18 radiation 40.0 270 < th dose independent rect. 15 4
199 191.18 wind 9.0 270 < th dose independent rect. 14 6
201 191.34 wind 1.0 270 > th dose independent rect. 15 4
204 191.36 precipitation 0.1 270 < th dose independent rect. 15 4
205 191.36 precipitation 0.1 270 < th dose dependent rect. 15 4
208 191.77 wind 1.0 270 > th dose independent rect. 14 6
212 191.99 atmosphere 1015.0 270 < th dose independent rect. 14 6
213 191.99 temperature 10.0 270 > th dose independent rect. 20 18
214 191.99 atmosphere 995.0 270 > th dose independent rect. 20 18
216 192.01 humidity 50.0 270 > th dose independent rect. 20 18
218 192.03 radiation 1.0 270 > th dose independent rect. 15 15
219 192.04 precipitation 0.1 270 < th dose independent rect. 14 6
220 192.04 humidity 50.0 270 > th dose independent rect. 19 20
221 192.04 precipitation 0.1 270 < th dose dependent rect. 14 6
223 192.10 wind 9.0 270 < th dose independent rect. 19 20
236 192.58 atmosphere 995.0 270 > th dose independent rect. 19 20
238 192.61 wind 9.0 270 < th dose independent rect. 20 18
240 192.68 radiation 1.0 270 > th dose independent rect. 15 4
255 192.93 precipitation 0.1 270 < th dose independent rect. 19 20
256 192.93 precipitation 0.1 270 < th dose dependent rect. 19 20
257 192.95 precipitation 0.1 270 < th dose independent rect. 20 18
259 192.95 precipitation 0.1 270 < th dose dependent rect. 20 18
262 193.26 temperature 20.0 90 > th dose independent rect. 16 18
283 193.99 temperature 20.0 10 > th dose independent rect. 16 19
285 194.11 radiation 1.0 270 < th dose dependent sin 13 NA
289 194.28 radiation 1.0 270 > th dose independent sin 13 NA
291 194.33 atmosphere 995.0 270 > th dose independent rect. 15 4
301 194.60 humidity 50.0 270 > th dose independent rect. 10 15
308 194.91 temperature 10.0 270 > th dose independent rect. 1 9
309 194.91 atmosphere 995.0 270 > th dose independent rect. 1 9
310 194.91 atmosphere 1015.0 270 < th dose independent rect. 1 9
311 194.91 temperature 10.0 270 > th dose independent rect. 10 15
314 194.95 wind 9.0 270 < th dose independent rect. 1 9
315 194.96 atmosphere 995.0 270 > th dose independent rect. 14 6
316 194.96 humidity 50.0 270 > th dose independent rect. 1 9
327 195.45 radiation 1.0 270 < th dose independent sin 13 NA
350 196.11 wind 1.0 270 > th dose independent rect. 19 20
356 196.35 wind 1.0 270 > th dose independent rect. 20 18
377 197.08 precipitation 0.1 270 < th dose independent rect. 1 9
378 197.08 precipitation 0.1 270 < th dose dependent rect. 1 9
408 198.19 wind 9.0 270 < th dose independent rect. 10 15
437 199.42 radiation 1.0 270 > th dose independent rect. 15 17
470 200.45 humidity 50.0 270 > th dose independent rect. 9 5
475 200.64 wind 9.0 270 < th dose independent rect. 14 19
477 200.70 temperature 10.0 270 > th dose independent rect. 9 5
478 200.70 atmosphere 995.0 270 > th dose independent rect. 9 5
479 200.70 atmosphere 1015.0 270 < th dose independent rect. 9 5
480 200.70 temperature 10.0 270 > th dose independent rect. 14 19
485 200.77 precipitation 0.1 270 < th dose independent rect. 10 15
486 200.77 precipitation 0.1 270 < th dose dependent rect. 10 15
497 201.00 precipitation 0.1 270 < th dose independent rect. 9 5
498 201.00 precipitation 0.1 270 < th dose dependent rect. 9 5
516 201.45 wind 9.0 270 < th dose independent rect. 9 5
528 201.68 radiation 1.0 270 > th dose independent rect. 9 5
540 201.93 precipitation 0.1 270 < th dose independent rect. 14 19
541 201.93 precipitation 0.1 270 < th dose dependent rect. 14 19
550 202.14 wind 9.0 270 < th dose independent rect. 15 17
553 202.19 temperature 10.0 270 > th dose independent rect. 8 7
554 202.19 atmosphere 1015.0 270 < th dose independent rect. 8 7
555 202.19 temperature 10.0 270 > th dose independent rect. 15 17
561 202.32 radiation 40.0 270 < th dose independent rect. 15 17
571 202.63 precipitation 0.1 270 < th dose independent rect. 8 7
572 202.63 precipitation 0.1 270 < th dose dependent rect. 8 7
578 202.68 precipitation 0.1 270 < th dose independent rect. 15 17
580 202.68 precipitation 0.1 270 < th dose dependent rect. 15 17
587 202.86 atmosphere 995.0 10 > th dose independent rect. 16 5
594 203.02 atmosphere 1015.0 270 < th dose dependent rect. 15 4
596 203.05 temperature 10.0 270 > th dose dependent rect. 3 17
597 203.07 precipitation 0.1 10 < th dose independent rect. 16 5
599 203.07 precipitation 0.1 10 < th dose dependent rect. 16 5
608 203.19 wind 9.0 270 < th dose independent rect. 8 7
621 203.38 wind 1.0 10 > th dose independent rect. 16 5
623 203.39 radiation 1.0 270 > th dose dependent rect. 16 14
625 203.48 wind 9.0 10 < th dose independent rect. 16 5
635 203.55 wind 1.0 270 > th dose independent rect. 9 5
640 203.59 temperature 10.0 10 > th dose independent rect. 16 5
642 203.59 atmosphere 1010.0 10 < th dose independent rect. 16 5
644 203.59 radiation 40.0 10 < th dose independent rect. 16 5
645 203.59 temperature 10.0 10 > th dose independent rect. 21 19
651 203.69 temperature 30.0 270 < th dose dependent sin 18 NA
667 203.90 atmosphere 995.0 270 > th dose independent rect. 8 7
685 204.11 radiation 40.0 270 < th dose independent rect. 14 19
688 204.20 humidity 50.0 270 > th dose independent rect. 8 7
701 204.30 radiation 1.0 270 > th dose independent rect. 8 7
729 204.47 wind 9.0 270 < th dose independent rect. 3 16
755 204.97 wind 9.0 270 < th dose independent rect. 19 8
757 205.02 radiation 40.0 10 < th dose dependent rect. 16 5
766 205.11 temperature 10.0 270 > th dose independent rect. 19 8
767 205.11 temperature 30.0 270 < th dose independent rect. 19 8
768 205.11 humidity 50.0 270 > th dose independent rect. 19 8
769 205.11 atmosphere 995.0 270 > th dose independent rect. 19 8
770 205.11 radiation 1.0 270 < th dose independent rect. 19 8
775 205.11 temperature 10.0 270 > th dose independent rect. 3 16
776 205.11 atmosphere 1015.0 270 < th dose independent rect. 3 16
777 205.11 radiation 10.0 270 < th dose dependent rect. 19 8
791 205.20 temperature 20.0 270 > th dose dependent sin 17 NA
807 205.49 temperature 30.0 270 < th dose independent rect. 1 9
822 205.62 temperature 10.0 270 > th dose independent rect. 10 3
823 205.62 atmosphere 995.0 270 > th dose independent rect. 10 3
824 205.62 atmosphere 1015.0 270 < th dose independent rect. 10 3
825 205.62 precipitation 0.1 270 < th dose independent rect. 10 3
827 205.62 atmosphere 995.0 10 > th dose independent rect. 21 19
828 205.62 temperature 10.0 270 > th dose independent rect. 13 21
829 205.62 precipitation 0.1 270 < th dose dependent rect. 10 3
832 205.70 radiation 1.0 270 > th dose independent rect. 10 3
833 205.71 humidity 50.0 270 > th dose independent rect. 10 3
836 205.76 wind 1.0 270 > th dose independent rect. 10 15
838 205.78 atmosphere 995.0 270 > th dose independent rect. 14 19
858 205.85 wind 9.0 270 < th dose independent rect. 13 21
869 206.01 radiation 1.0 270 > th dose dependent rect. 16 2
881 206.09 precipitation 0.1 270 < th dose independent rect. 3 16
882 206.09 precipitation 0.1 270 < th dose dependent rect. 3 16
890 206.18 wind 1.0 270 > th dose independent rect. 10 3
891 206.19 precipitation 0.1 10 < th dose independent rect. 16 7
893 206.19 precipitation 0.1 10 < th dose dependent rect. 16 7
906 206.38 wind 9.0 270 < th dose independent rect. 10 3
915 206.45 wind 9.0 270 < th dose dependent rect. 15 4
917 206.48 atmosphere 995.0 270 > th dose independent rect. 15 17
959 206.88 wind 1.0 270 > th dose independent rect. 8 7