Os01g0666500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0666500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.17 | 0.312 | 9.1 | -0.263 | 1.07 | 0.567 | -0.61 | -0.18 | -0.0397 | 3.58 | 71.32 | 795 | -- | -- |
| 44.09 | 0.309 | 9.1 | -0.286 | 1.1 | 0.56 | -0.603 | -- | -0.0405 | 3.54 | 73.07 | 846 | -- | -- |
| 45.17 | 0.313 | 9.09 | -0.271 | 1.12 | 0.545 | -- | 0.0108 | -0.0272 | 3.57 | 73.9 | 878 | -- | -- |
| 45.1 | 0.313 | 9.09 | -0.274 | 1.15 | 0.516 | -- | -- | -0.0334 | 3.65 | 73.71 | 917 | -- | -- |
| 71.73 | 0.394 | 9.1 | -0.291 | -- | 0.868 | -- | -0.251 | -0.00322 | -- | 80 | 353 | -- | -- |
| 50.08 | 0.332 | 9.1 | -0.345 | 1.19 | -- | -0.542 | -- | -0.0733 | 4.45 | -- | -- | -- | -- |
| 50.88 | 0.334 | 9.1 | -0.341 | 1.19 | -- | -- | -- | -0.0704 | 4.46 | -- | -- | -- | -- |
| 70.35 | 0.391 | 9.1 | -0.23 | -- | 0.985 | -- | -- | 0.00385 | -- | 74 | 404 | -- | -- |
| 47.05 | 0.319 | 9.09 | -- | 1.15 | 0.558 | -- | -- | -0.000457 | 3.59 | 73.45 | 917 | -- | -- |
| 126.21 | 0.525 | 9.1 | -0.294 | -- | -- | -- | -- | -0.0391 | -- | -- | -- | -- | -- |
| 53.93 | 0.344 | 9.09 | -- | 1.18 | -- | -- | -- | -0.0325 | 4.46 | -- | -- | -- | -- |
| 71.9 | 0.395 | 9.09 | -- | -- | 0.981 | -- | -- | 0.0375 | -- | 74.2 | 396 | -- | -- |
| 128.5 | 0.529 | 9.1 | -- | -- | -- | -- | -- | -0.00643 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.14 | humidity | 70.0 | 720 | > th | dose independent | rect. | 15 | 14 |
| 2 | 42.19 | humidity | 70.0 | 720 | > th | dose independent | rect. | 15 | 5 |
| 7 | 42.39 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 9 | 42.41 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 3 |
| 29 | 42.91 | temperature | 25.0 | 270 | > th | dose independent | rect. | 24 | 5 |
| 31 | 42.93 | temperature | 20.0 | 10 | > th | dose independent | rect. | 19 | 10 |
| 32 | 42.98 | radiation | 10.0 | 720 | < th | dose independent | rect. | 14 | 15 |
| 35 | 43.03 | humidity | 70.0 | 720 | > th | dose independent | rect. | 10 | 18 |
| 38 | 43.07 | temperature | 25.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 39 | 43.07 | humidity | 70.0 | 720 | > th | dose independent | rect. | 10 | 10 |
| 40 | 43.09 | humidity | 90.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 41 | 43.09 | humidity | 70.0 | 720 | < th | dose independent | rect. | 13 | 19 |
| 42 | 43.12 | radiation | 10.0 | 720 | < th | dose independent | rect. | 14 | 5 |
| 46 | 43.16 | humidity | 70.0 | 720 | < th | dose independent | rect. | 13 | 7 |
| 58 | 43.18 | humidity | 70.0 | 720 | > th | dose independent | sin | 16 | NA |
| 63 | 43.22 | wind | 7.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 65 | 43.22 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 68 | 43.22 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 72 | 43.22 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 81 | 43.22 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 82 | 43.22 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 83 | 43.22 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 92 | 43.22 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 103 | 43.27 | wind | 1.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 108 | 43.31 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 113 | 43.35 | humidity | 70.0 | 720 | > th | dose independent | rect. | 24 | 20 |
| 120 | 43.39 | temperature | 25.0 | 90 | > th | dose independent | rect. | 2 | 3 |
| 168 | 43.53 | wind | 3.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 170 | 43.55 | humidity | 70.0 | 720 | < th | dose independent | sin | 16 | NA |
| 190 | 43.72 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 217 | 43.84 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 2 | 3 |
| 219 | 43.84 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 14 | 15 |
| 232 | 43.85 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 246 | 43.90 | temperature | 25.0 | 270 | > th | dose independent | rect. | 1 | 1 |
| 266 | 43.96 | humidity | 60.0 | 720 | > th | dose independent | rect. | 17 | 18 |
| 270 | 43.98 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 1 |
| 272 | 43.98 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 276 | 44.01 | humidity | 70.0 | 720 | > th | dose independent | rect. | 14 | 21 |
| 278 | 44.02 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 282 | 44.03 | wind | 9.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 283 | 44.03 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 286 | 44.03 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 291 | 44.03 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 293 | 44.03 | radiation | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 299 | 44.03 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 300 | 44.03 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 308 | 44.04 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 14 | 5 |
| 309 | 44.05 | temperature | 20.0 | 10 | > th | dose independent | rect. | 24 | 5 |
| 312 | 44.05 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 15 | 12 |
| 313 | 44.06 | wind | 3.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 329 | 44.09 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 14 | 14 |
| 332 | 44.10 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 337 | 44.11 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 352 | 44.15 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 2 | 3 |
| 371 | 44.21 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 374 | 44.22 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 380 | 44.23 | temperature | 20.0 | 10 | > th | dose independent | rect. | 10 | 19 |
| 382 | 44.23 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 17 | 1 |
| 428 | 44.30 | wind | 1.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 445 | 44.34 | humidity | 70.0 | 720 | > th | dose independent | rect. | 10 | 23 |
| 485 | 44.38 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 13 |
| 522 | 44.46 | humidity | 70.0 | 720 | > th | dose independent | no | NA | NA |
| 529 | 44.46 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 17 | 10 |
| 534 | 44.47 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 8 |
| 594 | 44.57 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 24 | 5 |
| 605 | 44.60 | radiation | 10.0 | 720 | < th | dose independent | sin | 14 | NA |
| 636 | 44.64 | humidity | 70.0 | 720 | < th | dose independent | rect. | 17 | 23 |
| 637 | 44.64 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 14 | 1 |
| 644 | 44.66 | humidity | 70.0 | 720 | < th | dose independent | rect. | 14 | 1 |
| 665 | 44.68 | temperature | 25.0 | 270 | > th | dose independent | rect. | 24 | 8 |
| 675 | 44.69 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 19 | 10 |
| 694 | 44.73 | humidity | 80.0 | 720 | < th | dose dependent | sin | 13 | NA |
| 720 | 44.77 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 8 | 13 |
| 736 | 44.80 | humidity | 70.0 | 720 | < th | dose independent | no | NA | NA |
| 738 | 44.80 | humidity | 70.0 | 720 | < th | dose independent | rect. | 6 | 14 |
| 821 | 44.83 | radiation | 10.0 | 720 | < th | dose independent | rect. | 17 | 1 |
| 837 | 44.84 | radiation | 30.0 | 720 | < th | dose independent | rect. | 14 | 15 |
| 854 | 44.87 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 24 | 1 |
| 861 | 44.88 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 23 |
| 869 | 44.89 | temperature | 20.0 | 10 | > th | dose independent | rect. | 21 | 8 |
| 872 | 44.89 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 877 | 44.89 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 12 | 11 |
| 920 | 44.93 | radiation | 10.0 | 720 | < th | dose dependent | sin | 15 | NA |
| 938 | 44.96 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 939 | 44.96 | radiation | 10.0 | 720 | > th | dose independent | rect. | 14 | 1 |
| 948 | 44.96 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 11 | 8 |
| 960 | 44.97 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 14 | 17 |
| 966 | 44.98 | temperature | 20.0 | 10 | > th | dose independent | rect. | 12 | 17 |
| 967 | 44.98 | radiation | 40.0 | 720 | < th | dose dependent | sin | 14 | NA |