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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0666400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.44 (0.029) R2 : 0.00163
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0527 (0.061) R2dN8 : 0.00211 R2N8 : 0.00163
σ : 0.546
deviance : 136.7
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
127.79 0.531 3.45 0.144 0.276 0.694 -0.294 1.74 0.0804 5.89 21.15 871 -- --
130.12 0.531 3.41 0.284 0.279 0.298 -0.294 -- 0.127 5.78 24.25 942 -- --
127.88 0.527 3.45 0.123 0.279 0.63 -- 1.64 0.0826 6.08 21.81 958 -- --
130.25 0.532 3.41 0.274 0.275 0.276 -- -- 0.125 6.25 24.18 909 -- --
131.72 0.535 3.45 0.127 -- 0.633 -- 1.6 0.0958 -- 22.1 847 -- --
131.3 0.537 3.43 0.198 0.287 -- -0.141 -- 0.0688 6.48 -- -- -- --
131.34 0.537 3.42 0.196 0.286 -- -- -- 0.0695 6.69 -- -- -- --
133.09 0.537 3.41 0.3 -- 0.387 -- -- 0.148 -- 29.9 525 -- --
131.99 0.535 3.42 -- 0.285 0.15 -- -- 0.0715 6.42 24.12 898 -- --
135.61 0.544 3.43 0.203 -- -- -- -- 0.0752 -- -- -- -- --
132.35 0.538 3.43 -- 0.289 -- -- -- 0.0477 6.65 -- -- -- --
135.23 0.542 3.43 -- -- 0.282 -- -- 0.0988 -- 30.2 457 -- --
136.7 0.546 3.44 -- -- -- -- -- 0.0527 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 115.42 atmosphere 1000.0 30 > th dose independent rect. 3 23
2 115.97 radiation 1.0 4320 < th dose dependent rect. 3 1
3 115.99 radiation 10.0 43200 < th dose dependent rect. 3 1
8 116.07 wind 9.0 1440 < th dose independent rect. 3 1
9 116.07 temperature 10.0 1440 > th dose independent rect. 3 1
12 116.07 temperature 30.0 1440 < th dose independent rect. 3 1
16 116.07 humidity 50.0 1440 > th dose independent rect. 3 1
25 116.07 atmosphere 995.0 1440 > th dose independent rect. 3 1
26 116.07 radiation 1.0 1440 < th dose independent rect. 3 1
46 116.07 temperature 10.0 1440 > th dose independent rect. 4 23
61 116.10 atmosphere 1005.0 30 > th dose dependent rect. 2 1
63 116.13 temperature 20.0 30 > th dose dependent rect. 2 1
64 116.15 atmosphere 1005.0 30 > th dose independent rect. 2 1
68 116.21 wind 3.0 30 < th dose independent rect. 2 1
69 116.21 temperature 20.0 30 > th dose independent rect. 2 1
71 116.23 wind 5.0 30 < th dose dependent rect. 2 1
79 116.32 temperature 10.0 30 > th dose independent rect. 2 1
81 116.32 temperature 30.0 30 < th dose independent rect. 2 1
82 116.32 humidity 50.0 30 > th dose independent rect. 2 1
86 116.32 atmosphere 1010.0 30 < th dose independent rect. 2 1
88 116.32 radiation 1.0 30 < th dose independent rect. 2 1
93 116.32 precipitation 0.1 30 < th dose independent rect. 2 1
94 116.32 temperature 10.0 30 > th dose independent rect. 3 23
95 116.32 humidity 50.0 30 > th dose dependent rect. 2 1
98 116.32 radiation 1.0 30 < th dose dependent rect. 2 1
103 116.32 precipitation 0.1 30 < th dose dependent rect. 2 1
115 116.60 atmosphere 1015.0 30 < th dose dependent rect. 2 1
118 116.67 temperature 30.0 30 < th dose dependent rect. 2 1
122 116.78 wind 1.0 30 > th dose independent rect. 2 1
171 117.57 precipitation 0.1 30 < th dose independent rect. 3 23
172 117.57 precipitation 0.1 30 < th dose dependent rect. 3 23
178 118.50 wind 9.0 30 < th dose independent rect. 3 23
193 120.20 humidity 80.0 10 < th dose independent rect. 7 1
199 120.51 radiation 10.0 30 > th dose independent rect. 7 1
200 120.52 humidity 80.0 10 < th dose independent rect. 23 9
202 120.54 humidity 50.0 30 > th dose independent rect. 3 23
221 121.93 temperature 25.0 30 > th dose independent rect. 7 1
270 122.49 humidity 90.0 90 < th dose independent rect. 2 1
280 122.78 radiation 10.0 10 > th dose independent rect. 16 16
295 123.57 wind 1.0 10 > th dose independent rect. 8 23
304 123.79 atmosphere 1015.0 30 < th dose independent rect. 3 23
309 123.95 temperature 30.0 30 < th dose independent rect. 3 23
326 124.47 temperature 25.0 270 > th dose dependent rect. 24 6
352 124.94 wind 5.0 30 < th dose dependent rect. 2 6
353 124.97 wind 1.0 10 > th dose independent rect. 21 23
358 125.04 radiation 10.0 10 < th dose dependent rect. 3 23
369 125.21 temperature 10.0 30 > th dose dependent rect. 3 23
375 125.27 humidity 90.0 90 < th dose independent rect. 1 3
378 125.33 atmosphere 1005.0 30 > th dose independent rect. 2 6
383 125.37 temperature 15.0 30 > th dose dependent rect. 2 6
390 125.46 atmosphere 995.0 720 > th dose independent rect. 23 16
392 125.48 wind 9.0 720 < th dose independent rect. 15 8
393 125.48 atmosphere 1000.0 30 > th dose dependent rect. 2 6
396 125.51 atmosphere 1000.0 30 > th dose independent rect. 8 18
404 125.58 wind 9.0 720 < th dose dependent rect. 2 1
431 125.68 wind 1.0 10 < th dose independent rect. 13 14
433 125.68 wind 1.0 14400 < th dose dependent rect. 2 1
445 125.76 wind 5.0 30 < th dose independent rect. 2 6
449 125.79 temperature 10.0 720 > th dose independent rect. 15 8
450 125.79 wind 1.0 10 < th dose independent rect. 17 10
453 125.79 temperature 10.0 720 > th dose independent rect. 23 16
472 125.88 temperature 20.0 10 > th dose dependent rect. 7 1
478 125.92 atmosphere 1005.0 30 > th dose independent rect. 7 1
480 125.94 atmosphere 1010.0 30 < th dose independent rect. 2 6
481 125.96 humidity 90.0 90 < th dose independent rect. 1 20
482 125.96 atmosphere 1000.0 10 > th dose independent rect. 21 23
483 125.98 radiation 20.0 720 > th dose independent rect. 15 1
490 126.02 wind 1.0 10 > th dose independent rect. 21 10
491 126.03 precipitation 0.1 720 < th dose independent rect. 15 8
492 126.03 precipitation 0.1 720 < th dose dependent rect. 15 8
495 126.07 temperature 10.0 720 > th dose independent rect. 3 8
496 126.07 atmosphere 995.0 720 > th dose independent rect. 3 8
497 126.07 temperature 10.0 720 > th dose independent rect. 11 16
501 126.09 radiation 10.0 10 < th dose independent rect. 3 23
502 126.11 radiation 1.0 30 > th dose independent rect. 8 23
506 126.15 atmosphere 1000.0 10 > th dose independent rect. 14 12
511 126.17 wind 9.0 4320 < th dose independent rect. 3 6
513 126.18 wind 9.0 1440 < th dose independent rect. 21 1
524 126.26 humidity 50.0 720 > th dose independent rect. 3 8
526 126.26 humidity 50.0 30 > th dose dependent rect. 3 23
527 126.27 temperature 25.0 1440 < th dose independent rect. 1 1
530 126.27 atmosphere 1000.0 30 > th dose independent rect. 8 23
556 126.30 temperature 10.0 1440 > th dose independent rect. 3 6
559 126.30 humidity 50.0 1440 > th dose independent rect. 3 6
561 126.30 atmosphere 995.0 1440 > th dose independent rect. 3 6
562 126.30 wind 9.0 720 < th dose independent rect. 3 8
563 126.30 temperature 10.0 1440 > th dose independent rect. 9 18
596 126.35 wind 9.0 30 < th dose independent rect. 8 18
603 126.38 precipitation 0.1 30 < th dose independent rect. 2 6
604 126.38 wind 9.0 720 < th dose independent rect. 15 16
606 126.38 precipitation 0.1 30 < th dose dependent rect. 2 6
613 126.41 temperature 10.0 30 > th dose independent rect. 2 6
615 126.41 temperature 30.0 30 < th dose independent rect. 2 6
616 126.41 humidity 50.0 30 > th dose independent rect. 2 6
618 126.41 atmosphere 995.0 30 > th dose independent rect. 2 6
620 126.41 temperature 10.0 30 > th dose independent rect. 8 18
632 126.45 wind 3.0 30 > th dose independent rect. 20 1
634 126.46 wind 1.0 14400 > th dose independent rect. 1 2
636 126.47 wind 1.0 14400 < th dose independent rect. 2 1
637 126.47 humidity 70.0 4320 > th dose independent rect. 21 1
639 126.47 precipitation 0.1 30 < th dose independent rect. 8 18
640 126.47 precipitation 0.1 30 < th dose dependent rect. 8 18
641 126.48 humidity 80.0 30 > th dose independent rect. 20 1
642 126.48 humidity 90.0 10 < th dose dependent rect. 7 1
643 126.49 temperature 10.0 1440 > th dose independent rect. 21 1
646 126.49 temperature 30.0 1440 < th dose independent rect. 21 1
650 126.49 humidity 50.0 1440 > th dose independent rect. 21 1
656 126.49 atmosphere 995.0 1440 > th dose independent rect. 21 1
657 126.49 radiation 1.0 1440 < th dose independent rect. 21 1
679 126.49 temperature 10.0 1440 > th dose independent rect. 22 23
683 126.50 atmosphere 995.0 720 > th dose independent rect. 14 1
685 126.50 temperature 20.0 30 > th dose dependent rect. 20 1
688 126.51 atmosphere 1005.0 30 > th dose independent rect. 20 1
692 126.51 wind 1.0 30 > th dose dependent rect. 20 1
694 126.51 humidity 60.0 30 > th dose dependent rect. 20 1
696 126.51 atmosphere 1000.0 30 > th dose dependent rect. 20 1
699 126.52 temperature 25.0 30 > th dose independent rect. 20 1
704 126.53 wind 5.0 30 < th dose independent rect. 20 1
707 126.53 temperature 10.0 30 > th dose independent rect. 20 1
710 126.53 temperature 30.0 30 < th dose independent rect. 20 1
711 126.53 humidity 50.0 30 > th dose independent rect. 20 1
714 126.53 atmosphere 995.0 30 > th dose independent rect. 20 1
715 126.53 atmosphere 1010.0 30 < th dose independent rect. 20 1
717 126.53 radiation 1.0 30 < th dose independent rect. 20 1
722 126.53 precipitation 0.1 30 < th dose independent rect. 20 1
725 126.53 temperature 10.0 30 > th dose independent rect. 21 23
727 126.53 radiation 1.0 30 < th dose dependent rect. 20 1
732 126.53 radiation 40.0 1440 < th dose dependent rect. 21 1
733 126.53 precipitation 0.1 30 < th dose dependent rect. 20 1
737 126.54 wind 1.0 30 > th dose independent rect. 3 23
741 126.55 humidity 90.0 30 < th dose independent rect. 20 1
743 126.55 radiation 40.0 30 < th dose independent rect. 14 12
744 126.55 humidity 50.0 30 > th dose independent rect. 8 18
748 126.56 wind 9.0 30 < th dose dependent rect. 20 1
751 126.56 humidity 90.0 90 < th dose dependent rect. 1 7
753 126.57 temperature 10.0 30 > th dose dependent rect. 8 18
755 126.58 wind 1.0 14400 < th dose independent rect. 4 4
756 126.58 wind 9.0 720 < th dose independent rect. 15 6
775 126.59 atmosphere 1015.0 30 < th dose dependent rect. 20 1
781 126.60 temperature 20.0 720 > th dose independent rect. 3 16
802 126.62 radiation 40.0 30 < th dose independent rect. 2 6
804 126.63 precipitation 0.1 720 < th dose independent rect. 11 16
806 126.63 precipitation 0.1 720 < th dose dependent rect. 11 16
816 126.64 temperature 30.0 30 < th dose dependent rect. 20 1
817 126.64 humidity 90.0 30 < th dose dependent rect. 20 1
824 126.65 atmosphere 995.0 30 > th dose dependent rect. 3 23
829 126.68 wind 1.0 10 > th dose independent sin 15 NA
830 126.68 wind 1.0 14400 > th dose independent rect. 4 4
835 126.69 wind 5.0 720 < th dose independent rect. 2 1
839 126.70 wind 1.0 14400 < th dose independent rect. 2 6
859 126.75 wind 1.0 14400 > th dose independent rect. 2 6
860 126.75 temperature 20.0 720 > th dose independent rect. 7 8
884 126.76 wind 9.0 30 < th dose independent rect. 21 23
905 126.79 wind 3.0 30 < th dose independent rect. 7 1
915 126.80 wind 5.0 10 < th dose dependent rect. 7 1
919 126.80 radiation 1.0 720 < th dose dependent rect. 18 9
921 126.81 atmosphere 1015.0 720 < th dose independent rect. 3 8
943 126.86 wind 9.0 10 < th dose independent rect. 14 12
951 126.87 wind 1.0 14400 < th dose dependent rect. 4 4
955 126.88 humidity 50.0 10 > th dose independent rect. 2 12
956 126.88 precipitation 0.1 10 < th dose independent rect. 2 12
961 126.88 precipitation 0.1 10 < th dose dependent rect. 2 12
964 126.89 humidity 60.0 10 > th dose independent rect. 14 12
969 126.90 wind 9.0 720 < th dose independent rect. 19 8
975 126.91 wind 1.0 14400 < th dose dependent rect. 2 6
976 126.92 radiation 10.0 270 > th dose independent rect. 8 1
986 126.93 radiation 10.0 720 > th dose dependent rect. 15 1
990 126.94 wind 1.0 30 > th dose independent rect. 8 18