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Os01g0665900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.7 (0.0381) R2 : 0.786
β1 : 1.46 (0.139) R2dD : 0.0529 R2D : 0.0472
β2 : 1.98 (0.107) R2dC : 0.209 R2C : 0.442
β3 : 2.25 (0.102) R2dE : 0.293 R2E : 0.527
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.163 (0.0814) R2dN8 : 0.0025 R2N8 : -0.000947
σ : 0.712
deviance : 233.65
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_____
C
peak time of C : 21.1
E
wheather : wind
threshold : 0.9926
memory length : 197
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 12.4
open length of G : 6.53

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
234.54 0.72 11.7 1.46 1.99 2.31 0.381 -0.0539 0.181 21.1 0.7 231 12.2 6.29
233.83 0.712 11.7 1.45 1.98 2.3 0.431 -- 0.157 21.2 0.8007 214 12.3 6.38
233.63 0.712 11.7 1.46 2 2.24 -- 0.152 0.167 21.1 1 196 12.4 6.5
233.65 0.712 11.7 1.46 1.98 2.25 -- -- 0.163 21.1 0.9926 197 12.4 6.53
294.24 0.799 11.7 1.42 -- 3.49 -- -0.0557 0.168 -- -1.296 347 12 7.8
344.65 0.87 11.8 1.53 3.6 -- 0.375 -- 0.316 19.4 -- -- -- --
345.04 0.87 11.8 1.52 3.6 -- -- -- 0.317 19.4 -- -- -- --
287.63 0.79 11.7 1.45 -- 3.29 -- -- 0.137 -- -2.24 299 12 8.58
289.94 0.793 11.8 -- 2.02 2.22 -- -- 0.0894 21.1 0.8 199 12.4 6.6
1036.01 1.5 11.7 1.46 -- -- -- -- 0.259 -- -- -- -- --
405.79 0.942 11.8 -- 3.58 -- -- -- 0.148 19.5 -- -- -- --
344.21 0.864 11.7 -- -- 3.28 -- -- 0.019 -- -2.646 299 12 8.6
1092.37 1.54 11.7 -- -- -- -- -- 0.0973 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 236.37 wind 1.0 270 > th dose independent rect. 12 6
2 236.55 atmosphere 1015.0 270 < th dose independent rect. 23 9
3 236.73 temperature 20.0 270 > th dose independent rect. 12 6
5 237.36 humidity 50.0 270 > th dose independent rect. 18 18
6 237.85 temperature 10.0 270 > th dose independent rect. 12 6
8 237.85 atmosphere 1015.0 270 < th dose independent rect. 12 6
9 237.85 temperature 10.0 270 > th dose independent rect. 18 18
10 237.91 wind 9.0 270 < th dose independent rect. 18 18
11 238.31 precipitation 0.1 270 < th dose independent rect. 18 18
12 238.31 precipitation 0.1 270 < th dose dependent rect. 18 18
13 238.56 precipitation 0.1 270 < th dose independent rect. 23 9
14 238.56 precipitation 0.1 270 < th dose dependent rect. 23 9
16 238.66 temperature 10.0 270 > th dose independent rect. 23 9
17 238.66 temperature 30.0 270 < th dose independent rect. 23 9
18 238.66 humidity 50.0 270 > th dose independent rect. 23 9
20 238.66 atmosphere 995.0 270 > th dose independent rect. 23 9
21 238.66 temperature 10.0 270 > th dose independent rect. 8 15
22 238.67 atmosphere 995.0 270 > th dose independent rect. 12 6
23 238.67 wind 9.0 270 < th dose independent rect. 8 15
24 238.73 wind 9.0 270 < th dose independent rect. 23 9
26 238.93 atmosphere 995.0 270 > th dose independent rect. 18 18
27 239.04 precipitation 0.1 270 < th dose independent rect. 12 6
28 239.04 precipitation 0.1 270 < th dose dependent rect. 12 6
29 239.11 radiation 40.0 270 < th dose independent rect. 23 9
37 239.53 wind 9.0 270 < th dose independent rect. 12 6
39 239.59 precipitation 0.1 270 < th dose independent rect. 8 15
40 239.59 precipitation 0.1 270 < th dose dependent rect. 8 15
65 242.35 wind 1.0 90 > th dose independent rect. 20 17
69 242.66 wind 1.0 270 > th dose independent rect. 18 18
79 243.47 radiation 40.0 90 < th dose independent rect. 13 6
80 243.57 radiation 40.0 10 < th dose independent rect. 13 7
83 243.81 atmosphere 995.0 270 > th dose dependent rect. 12 6
89 244.42 radiation 40.0 270 < th dose dependent rect. 23 9
91 244.43 temperature 10.0 270 > th dose dependent rect. 6 6
100 244.94 temperature 10.0 270 > th dose independent rect. 13 4
102 244.94 atmosphere 1010.0 270 < th dose independent rect. 13 4
104 244.94 temperature 10.0 270 > th dose independent rect. 17 20
122 245.31 humidity 50.0 270 > th dose independent rect. 12 6
151 246.15 wind 9.0 270 < th dose independent rect. 13 4
171 247.04 temperature 10.0 270 > th dose dependent rect. 8 3
181 247.76 wind 1.0 270 > th dose dependent rect. 12 6
185 247.98 wind 1.0 270 > th dose independent rect. 8 3
194 248.39 wind 1.0 270 > th dose independent rect. 6 6
205 248.64 radiation 10.0 30 > th dose independent rect. 8 6
214 248.78 humidity 90.0 270 < th dose independent rect. 12 6
224 248.85 humidity 50.0 270 > th dose independent rect. 13 4
227 248.94 humidity 50.0 270 > th dose independent rect. 8 3
247 249.82 wind 1.0 270 > th dose independent rect. 8 15
249 249.85 atmosphere 995.0 270 > th dose dependent rect. 13 4
250 249.90 temperature 10.0 270 > th dose independent rect. 8 3
251 249.90 atmosphere 995.0 270 > th dose independent rect. 8 3
252 249.90 atmosphere 1015.0 270 < th dose independent rect. 8 3
253 249.90 temperature 10.0 270 > th dose independent rect. 11 21
254 249.94 precipitation 0.1 270 < th dose independent rect. 8 3
255 249.94 precipitation 0.1 270 < th dose dependent rect. 8 3
259 250.06 wind 9.0 270 < th dose independent rect. 8 3
265 250.49 atmosphere 1015.0 270 < th dose independent rect. 12 19
271 250.77 temperature 10.0 10 > th dose dependent rect. 8 6
272 250.79 humidity 50.0 270 > th dose independent rect. 7 5
296 251.67 temperature 10.0 270 > th dose independent rect. 6 6
297 251.67 atmosphere 995.0 270 > th dose independent rect. 6 6
298 251.67 atmosphere 1015.0 270 < th dose independent rect. 6 6
299 251.67 temperature 10.0 270 > th dose independent rect. 12 18
307 251.77 wind 9.0 270 < th dose independent rect. 17 8
308 251.90 precipitation 0.1 270 < th dose independent rect. 6 6
309 251.90 precipitation 0.1 270 < th dose dependent rect. 6 6
310 251.93 atmosphere 1015.0 270 < th dose independent rect. 11 21
315 252.06 wind 9.0 270 < th dose independent rect. 7 5
317 252.11 radiation 1.0 270 > th dose independent rect. 8 3
333 252.40 atmosphere 995.0 270 > th dose independent rect. 12 19
345 252.60 temperature 10.0 270 > th dose independent rect. 17 8
346 252.60 radiation 20.0 270 < th dose independent rect. 17 8
350 252.60 temperature 10.0 270 > th dose independent rect. 1 16
351 252.60 atmosphere 1015.0 270 < th dose independent rect. 1 16
356 252.77 wind 9.0 270 < th dose independent rect. 11 21
358 252.79 radiation 1.0 270 > th dose independent rect. 12 18
373 253.05 wind 9.0 270 < th dose dependent rect. 23 9
382 253.24 precipitation 0.1 270 < th dose independent rect. 17 8
384 253.24 precipitation 0.1 270 < th dose dependent rect. 17 8
394 253.51 radiation 40.0 270 < th dose dependent rect. 17 8
396 253.58 precipitation 0.1 10 < th dose independent rect. 14 6
397 253.58 precipitation 0.1 10 < th dose dependent rect. 14 6
399 253.67 wind 9.0 270 < th dose independent rect. 12 19
400 253.67 atmosphere 995.0 270 > th dose independent rect. 11 21
407 253.84 atmosphere 995.0 270 > th dose independent rect. 1 16
414 253.96 wind 9.0 270 < th dose independent rect. 1 16
420 254.09 precipitation 0.1 270 < th dose independent rect. 11 21
421 254.09 precipitation 0.1 270 < th dose dependent rect. 11 21
422 254.10 radiation 1.0 270 > th dose independent rect. 12 6
432 254.17 temperature 20.0 10 > th dose independent rect. 14 6
433 254.19 wind 1.0 10 > th dose independent rect. 14 6
435 254.22 temperature 10.0 10 > th dose independent rect. 14 6
437 254.22 atmosphere 1010.0 10 < th dose independent rect. 14 6
439 254.22 temperature 10.0 10 > th dose independent rect. 20 18
440 254.22 atmosphere 995.0 10 > th dose independent rect. 20 18
443 254.26 precipitation 0.1 270 < th dose independent rect. 1 16
445 254.26 precipitation 0.1 270 < th dose dependent rect. 1 16
454 254.55 precipitation 0.1 270 < th dose independent rect. 12 19
455 254.55 precipitation 0.1 270 < th dose dependent rect. 12 19
458 254.67 humidity 50.0 270 > th dose independent rect. 17 8
479 254.86 humidity 50.0 270 > th dose dependent rect. 23 9
494 255.08 wind 9.0 10 < th dose independent rect. 20 18
506 255.22 precipitation 0.1 10 < th dose independent rect. 20 18
507 255.22 precipitation 0.1 10 < th dose dependent rect. 20 18
546 255.70 radiation 1.0 270 > th dose independent rect. 13 4
549 255.75 wind 9.0 10 < th dose independent rect. 14 6
587 256.39 radiation 40.0 90 < th dose independent rect. 13 20
589 256.43 atmosphere 995.0 10 > th dose independent rect. 14 6
663 257.34 atmosphere 995.0 270 > th dose independent rect. 17 8
683 257.57 wind 1.0 270 > th dose independent rect. 17 8
685 257.58 atmosphere 995.0 10 > th dose dependent rect. 13 7
766 258.31 wind 9.0 270 < th dose dependent rect. 8 15
769 258.36 wind 9.0 270 < th dose dependent rect. 8 3
786 258.59 atmosphere 995.0 270 > th dose independent rect. 8 15
846 259.03 radiation 40.0 10 < th dose dependent rect. 13 7
850 259.09 temperature 15.0 10 > th dose dependent rect. 6 8
869 259.24 temperature 30.0 10 < th dose independent rect. 1 9
879 259.42 temperature 10.0 1440 > th dose independent rect. 14 7
882 259.42 temperature 10.0 1440 > th dose independent rect. 21 17
885 259.42 atmosphere 995.0 1440 > th dose independent rect. 21 17
889 259.52 humidity 50.0 10 > th dose independent rect. 20 18
918 259.83 radiation 40.0 10 < th dose independent rect. 12 22
925 259.90 temperature 10.0 270 > th dose dependent rect. 12 6
942 260.09 atmosphere 1015.0 10 < th dose independent rect. 14 18