Os01g0663800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1296 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0663800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF1296 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.86 | 0.193 | 12.3 | 0.75 | 0.784 | -1.03 | -0.4 | 2.09 | 0.213 | 2.31 | 22.77 | 931 | -- | -- |
| 19.29 | 0.205 | 12.4 | 0.276 | 0.767 | -0.864 | -0.223 | -- | 0.0809 | 2.25 | 21.24 | 868 | -- | -- |
| 17.43 | 0.194 | 12.3 | 0.752 | 0.793 | -1.03 | -- | 2.04 | 0.216 | 2.34 | 22.83 | 939 | -- | -- |
| 19.28 | 0.205 | 12.3 | 0.264 | 0.771 | -0.85 | -- | -- | 0.0816 | 2.42 | 22.3 | 915 | -- | -- |
| 23.82 | 0.227 | 12.2 | 0.629 | -- | -1.48 | -- | 1.84 | 0.327 | -- | 19.76 | 131 | -- | -- |
| 36.85 | 0.285 | 12.4 | 0.0198 | 0.704 | -- | -0.336 | -- | -0.07 | 3.53 | -- | -- | -- | -- |
| 37.2 | 0.286 | 12.4 | 0.0255 | 0.703 | -- | -- | -- | -0.0681 | 3.55 | -- | -- | -- | -- |
| 23.45 | 0.226 | 12.3 | 0.364 | -- | -1.48 | -- | -- | 0.17 | -- | 17.2 | 132 | -- | -- |
| 20.97 | 0.213 | 12.4 | -- | 0.761 | -0.79 | -- | -- | 0.0402 | 2.43 | 22.34 | 894 | -- | -- |
| 64.77 | 0.376 | 12.4 | 0.055 | -- | -- | -- | -- | -0.0494 | -- | -- | -- | -- | -- |
| 37.22 | 0.285 | 12.4 | -- | 0.703 | -- | -- | -- | -0.0709 | 3.55 | -- | -- | -- | -- |
| 26.75 | 0.241 | 12.3 | -- | -- | -1.32 | -- | -- | 0.116 | -- | 18 | 130 | -- | -- |
| 64.85 | 0.376 | 12.4 | -- | -- | -- | -- | -- | -0.0555 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.47 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 19 |
| 43 | 18.16 | temperature | 20 | 720 | > th | dose dependent | sin | 19 | NA |
| 67 | 18.32 | temperature | 20 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 74 | 18.40 | temperature | 20 | 720 | > th | dose dependent | rect. | 11 | 21 |
| 92 | 18.46 | temperature | 20 | 720 | > th | dose dependent | rect. | 13 | 23 |
| 106 | 18.53 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 110 | 18.54 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 12 |
| 130 | 18.61 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 8 |
| 147 | 18.67 | temperature | 25 | 1440 | > th | dose dependent | rect. | 9 | 9 |
| 154 | 18.69 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 10 |
| 164 | 18.71 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 171 | 18.72 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 179 | 18.73 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 16 |
| 192 | 18.75 | temperature | 20 | 720 | > th | dose dependent | rect. | 22 | 23 |
| 194 | 18.76 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 6 |
| 201 | 18.77 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 9 |
| 211 | 18.77 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 223 | 18.80 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 509 | 19.07 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 547 | 19.09 | temperature | 25 | 720 | > th | dose independent | rect. | 6 | 18 |
| 633 | 19.14 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 664 | 19.15 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 23 |