Os01g0661500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mov34/MPN/PAD-1 family protein.
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Os01g0661500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mov34/MPN/PAD-1 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 95.12 | 0.458 | 9.07 | -0.193 | 1.26 | 0.616 | 0.466 | 0.715 | -0.169 | 8.4 | 1010 | 9700 | -- | -- |
| 96.64 | 0.458 | 9.07 | -0.37 | 1.24 | 0.619 | 0.605 | -- | -0.127 | 8.51 | 1009 | 9671 | -- | -- |
| 95.8 | 0.456 | 9.07 | -0.188 | 1.26 | 0.616 | -- | 0.711 | -0.172 | 8.36 | 1010 | 9700 | -- | -- |
| 97.18 | 0.459 | 9.07 | -0.396 | 1.26 | 0.621 | -- | -- | -0.141 | 8.37 | 1009 | 9700 | -- | -- |
| 184.14 | 0.632 | 9.11 | -0.165 | -- | 0.637 | -- | 0.747 | -0.163 | -- | 1010 | 9803 | -- | -- |
| 110.17 | 0.492 | 9.06 | -0.209 | 1.28 | -- | 0.471 | -- | -0.0476 | 8.29 | -- | -- | -- | -- |
| 110.85 | 0.493 | 9.06 | -0.196 | 1.28 | -- | -- | -- | -0.0481 | 8.27 | -- | -- | -- | -- |
| 185.38 | 0.634 | 9.12 | -0.429 | -- | 0.664 | -- | -- | -0.161 | -- | 1009 | 9841 | -- | -- |
| 100.77 | 0.468 | 9.07 | -- | 1.24 | 0.642 | -- | -- | -0.129 | 8.26 | 1009 | 15770 | -- | -- |
| 200.88 | 0.662 | 9.09 | -0.187 | -- | -- | -- | -- | -0.0339 | -- | -- | -- | -- | -- |
| 111.86 | 0.495 | 9.05 | -- | 1.27 | -- | -- | -- | -0.0263 | 8.28 | -- | -- | -- | -- |
| 189.77 | 0.642 | 9.1 | -- | -- | 0.558 | -- | -- | -0.0984 | -- | 1009 | 9961 | -- | -- |
| 201.8 | 0.663 | 9.09 | -- | -- | -- | -- | -- | -0.0132 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 91.87 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 2 | 92.01 | humidity | 80 | 720 | > th | dose independent | rect. | 19 | 13 |
| 4 | 92.41 | humidity | 50 | 720 | > th | dose dependent | rect. | 19 | 13 |
| 8 | 92.63 | radiation | 1 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 9 | 92.65 | radiation | 1 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 15 | 92.65 | radiation | 1 | 43200 | < th | dose independent | rect. | 24 | 6 |
| 24 | 92.66 | radiation | 1 | 43200 | < th | dose independent | rect. | 3 | 3 |
| 30 | 92.77 | humidity | 80 | 1440 | < th | dose dependent | rect. | 19 | 12 |
| 31 | 92.81 | humidity | 80 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 34 | 92.97 | radiation | 20 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 49 | 93.05 | humidity | 80 | 1440 | < th | dose independent | rect. | 3 | 5 |
| 53 | 93.17 | humidity | 80 | 720 | < th | dose independent | rect. | 17 | 17 |
| 55 | 93.24 | humidity | 80 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 59 | 93.30 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 17 |
| 62 | 93.35 | radiation | 1 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 92 | 93.43 | radiation | 40 | 14400 | < th | dose dependent | rect. | 24 | 6 |
| 116 | 93.47 | radiation | 30 | 14400 | < th | dose independent | rect. | 24 | 9 |
| 127 | 93.49 | radiation | 30 | 14400 | < th | dose independent | rect. | 2 | 7 |
| 130 | 93.50 | radiation | 30 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 131 | 93.50 | radiation | 30 | 14400 | < th | dose independent | rect. | 4 | 5 |
| 134 | 93.50 | radiation | 30 | 14400 | < th | dose independent | rect. | 18 | 15 |
| 136 | 93.50 | radiation | 30 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 231 | 93.66 | humidity | 80 | 720 | > th | dose independent | sin | 10 | NA |
| 302 | 93.76 | humidity | 80 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 316 | 93.80 | humidity | 90 | 720 | < th | dose dependent | sin | 10 | NA |
| 320 | 93.82 | radiation | 20 | 14400 | < th | dose independent | sin | 11 | NA |
| 333 | 93.83 | humidity | 80 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 335 | 93.84 | radiation | 1 | 43200 | > th | dose independent | sin | 10 | NA |
| 340 | 93.85 | temperature | 10 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 341 | 93.85 | radiation | 40 | 14400 | > th | dose dependent | rect. | 14 | 20 |
| 362 | 93.87 | radiation | 1 | 43200 | < th | dose independent | sin | 9 | NA |
| 382 | 93.88 | radiation | 1 | 43200 | < th | dose independent | rect. | 16 | 15 |
| 450 | 93.92 | temperature | 30 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 460 | 93.93 | humidity | 80 | 1440 | < th | dose independent | rect. | 18 | 13 |
| 522 | 93.96 | humidity | 90 | 43200 | < th | dose dependent | rect. | 13 | 5 |
| 581 | 93.99 | humidity | 90 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 640 | 94.01 | humidity | 80 | 43200 | < th | dose independent | rect. | 8 | 12 |
| 646 | 94.01 | temperature | 10 | 43200 | > th | dose dependent | sin | 3 | NA |
| 667 | 94.02 | radiation | 1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 689 | 94.03 | humidity | 80 | 43200 | > th | dose dependent | rect. | 8 | 2 |
| 704 | 94.03 | humidity | 90 | 43200 | < th | dose dependent | rect. | 8 | 11 |
| 707 | 94.03 | humidity | 90 | 43200 | < th | dose dependent | rect. | 6 | 13 |
| 713 | 94.04 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 715 | 94.04 | humidity | 80 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 814 | 94.06 | humidity | 80 | 43200 | > th | dose independent | rect. | 8 | 12 |
| 917 | 94.08 | temperature | 30 | 43200 | < th | dose dependent | sin | 5 | NA |
| 965 | 94.09 | humidity | 90 | 43200 | < th | dose dependent | rect. | 17 | 1 |