Os01g0660100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0660100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 86.18 | 0.436 | 12.9 | -0.766 | 2.14 | 1.09 | 0.432 | -1.08 | -0.597 | 20 | 26.31 | 731 | -- | -- |
| 87.27 | 0.435 | 12.9 | -0.507 | 2.15 | 1.06 | 0.132 | -- | -0.512 | 20 | 26.6 | 732 | -- | -- |
| 86.39 | 0.433 | 12.9 | -0.745 | 2.16 | 1.09 | -- | -0.987 | -0.561 | 20 | 26.5 | 748 | -- | -- |
| 87.2 | 0.435 | 12.9 | -0.524 | 2.16 | 1.01 | -- | -- | -0.513 | 20 | 26.4 | 718 | -- | -- |
| 248.71 | 0.735 | 12.9 | -1.28 | -- | 2.62 | -- | -2.46 | -0.753 | -- | 27.51 | 640 | -- | -- |
| 117.97 | 0.509 | 12.9 | -0.186 | 2.68 | -- | 0.387 | -- | -0.255 | 20.1 | -- | -- | -- | -- |
| 118.42 | 0.51 | 12.9 | -0.197 | 2.68 | -- | -- | -- | -0.254 | 20.1 | -- | -- | -- | -- |
| 252.93 | 0.741 | 12.9 | -0.829 | -- | 2.47 | -- | -- | -0.642 | -- | 27.55 | 618 | -- | -- |
| 93.7 | 0.451 | 12.9 | -- | 2.24 | 0.888 | -- | -- | -0.431 | 20 | 26.3 | 718 | -- | -- |
| 511.22 | 1.06 | 12.8 | -0.222 | -- | -- | -- | -- | -0.288 | -- | -- | -- | -- | -- |
| 119.45 | 0.511 | 12.8 | -- | 2.68 | -- | -- | -- | -0.232 | 20.1 | -- | -- | -- | -- |
| 268.93 | 0.764 | 12.9 | -- | -- | 2.13 | -- | -- | -0.628 | -- | 26.5 | 615 | -- | -- |
| 512.52 | 1.06 | 12.8 | -- | -- | -- | -- | -- | -0.263 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 81.08 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 14 |
| 6 | 82.74 | temperature | 30 | 270 | < th | dose dependent | sin | 18 | NA |
| 9 | 83.18 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 15 |
| 12 | 83.36 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 11 |
| 29 | 84.32 | temperature | 25 | 270 | > th | dose independent | rect. | 12 | 9 |
| 35 | 84.56 | temperature | 20 | 270 | > th | dose dependent | sin | 17 | NA |
| 38 | 84.67 | temperature | 10 | 270 | > th | dose dependent | sin | 17 | NA |
| 70 | 85.92 | temperature | 20 | 720 | > th | dose dependent | rect. | 8 | 13 |
| 109 | 86.63 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 10 |
| 116 | 86.66 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 10 |
| 118 | 86.68 | temperature | 20 | 720 | > th | dose dependent | sin | 21 | NA |
| 123 | 86.75 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 8 |
| 127 | 86.82 | temperature | 30 | 720 | < th | dose dependent | sin | 22 | NA |
| 131 | 86.85 | temperature | 25 | 720 | > th | dose independent | rect. | 5 | 16 |
| 153 | 87.06 | temperature | 25 | 270 | < th | dose independent | rect. | 9 | 15 |
| 162 | 87.14 | temperature | 25 | 720 | < th | dose independent | rect. | 4 | 18 |
| 179 | 87.28 | temperature | 25 | 270 | < th | dose independent | rect. | 15 | 8 |
| 184 | 87.30 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 15 |
| 202 | 87.46 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 15 |
| 219 | 87.57 | temperature | 25 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 292 | 87.89 | temperature | 25 | 720 | > th | dose dependent | rect. | 9 | 22 |
| 315 | 88.00 | temperature | 25 | 720 | > th | dose dependent | rect. | 1 | 20 |
| 316 | 88.00 | temperature | 25 | 720 | > th | dose dependent | rect. | 1 | 22 |
| 317 | 88.00 | temperature | 25 | 720 | > th | dose dependent | rect. | 22 | 23 |
| 367 | 88.11 | temperature | 25 | 720 | > th | dose dependent | no | NA | NA |
| 408 | 88.16 | temperature | 10 | 720 | > th | dose dependent | sin | 21 | NA |
| 435 | 88.21 | temperature | 25 | 720 | > th | dose independent | sin | 22 | NA |
| 633 | 88.90 | temperature | 25 | 270 | > th | dose independent | sin | 19 | NA |
| 673 | 89.05 | temperature | 25 | 720 | < th | dose independent | sin | 22 | NA |
| 753 | 89.39 | temperature | 15 | 10 | > th | dose dependent | rect. | 15 | 17 |
| 820 | 89.66 | temperature | 25 | 270 | < th | dose independent | sin | 19 | NA |