Os01g0658500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF852, eukaryotic family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0658500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF852, eukaryotic family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17.93 | 0.199 | 9.91 | -0.315 | 1.11 | -0.202 | 0.454 | 0.604 | 0.0649 | 7.72 | 13.66 | 23 | -- | -- |
| 19.45 | 0.205 | 9.91 | -0.304 | 1.12 | -0.229 | 0.865 | -- | 0.0676 | 7.91 | 12 | 22 | -- | -- |
| 18.4 | 0.2 | 9.91 | -0.304 | 1.1 | -0.188 | -- | 0.741 | 0.0641 | 7.65 | 13.63 | 22 | -- | -- |
| 21.5 | 0.216 | 9.91 | -0.287 | 1.1 | -0.188 | -- | -- | 0.063 | 7.7 | 12.5 | 23 | -- | -- |
| 26.95 | 0.242 | 9.93 | -0.293 | -- | -1.42 | -- | 0.807 | 0.0998 | -- | 1.88 | 838 | -- | -- |
| 21.3 | 0.216 | 9.92 | -0.319 | 1.05 | -- | 0.719 | -- | 0.0497 | 7.18 | -- | -- | -- | -- |
| 22.61 | 0.223 | 9.92 | -0.305 | 1.05 | -- | -- | -- | 0.0475 | 7.07 | -- | -- | -- | -- |
| 24.73 | 0.232 | 9.93 | -0.221 | -- | -1.42 | -- | -- | 0.111 | -- | 1.561 | 851 | -- | -- |
| 23.72 | 0.227 | 9.91 | -- | 1.11 | -0.193 | -- | -- | 0.088 | 7.73 | 13.56 | 22 | -- | -- |
| 81.02 | 0.421 | 9.95 | -0.285 | -- | -- | -- | -- | 0.0665 | -- | -- | -- | -- | -- |
| 25.07 | 0.234 | 9.91 | -- | 1.05 | -- | -- | -- | 0.0815 | 7.09 | -- | -- | -- | -- |
| 25.88 | 0.237 | 9.93 | -- | -- | -1.42 | -- | -- | 0.126 | -- | 1.29 | 857 | -- | -- |
| 83.15 | 0.426 | 9.94 | -- | -- | -- | -- | -- | 0.098 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.57 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 11 | 20 |
| 2 | 17.58 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 3 | 17.59 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 4 | 17.63 | radiation | 30.0 | 270 | < th | dose independent | rect. | 11 | 20 |
| 12 | 17.71 | radiation | 10.0 | 270 | > th | dose independent | rect. | 14 | 22 |
| 35 | 17.83 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 53 | 17.85 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 57 | 17.87 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 17 | 14 |
| 64 | 17.90 | radiation | 10.0 | 30 | > th | dose independent | sin | 0 | NA |
| 76 | 17.93 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 78 | 17.94 | radiation | 20.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 89 | 17.96 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 92 | 17.96 | radiation | 10.0 | 10 | > th | dose independent | rect. | 14 | 23 |
| 93 | 17.97 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 95 | 17.97 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 97 | 17.97 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 100 | 17.97 | humidity | 70.0 | 270 | > th | dose independent | rect. | 11 | 20 |
| 106 | 17.97 | radiation | 30.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 109 | 17.98 | radiation | 10.0 | 30 | < th | dose independent | rect. | 19 | 23 |
| 118 | 18.00 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 10 |
| 119 | 18.00 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 121 | 18.00 | radiation | 10.0 | 270 | < th | dose independent | rect. | 24 | 23 |
| 122 | 18.00 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 10 |
| 134 | 18.02 | radiation | 10.0 | 30 | > th | dose independent | rect. | 8 | 9 |
| 164 | 18.04 | radiation | 10.0 | 10 | > th | dose independent | rect. | 16 | 21 |
| 177 | 18.06 | radiation | 10.0 | 10 | > th | dose independent | rect. | 16 | 23 |
| 179 | 18.07 | radiation | 10.0 | 270 | > th | dose independent | sin | 3 | NA |
| 192 | 18.09 | radiation | 10.0 | 10 | > th | dose independent | rect. | 6 | 7 |
| 199 | 18.09 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 223 | 18.11 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 14 |
| 235 | 18.11 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 14 |
| 271 | 18.14 | radiation | 20.0 | 90 | < th | dose independent | rect. | 19 | 15 |
| 276 | 18.14 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 283 | 18.15 | radiation | 20.0 | 10 | < th | dose independent | rect. | 9 | 23 |
| 298 | 18.16 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 7 | 12 |
| 374 | 18.20 | radiation | 10.0 | 30 | > th | dose independent | no | NA | NA |
| 457 | 18.20 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 14 | 22 |
| 461 | 18.21 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 5 |
| 464 | 18.21 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 471 | 18.21 | radiation | 10.0 | 270 | < th | dose dependent | no | NA | NA |
| 504 | 18.23 | radiation | 10.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 609 | 18.24 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 698 | 18.26 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 744 | 18.28 | radiation | 1.0 | 10 | > th | dose dependent | sin | 0 | NA |
| 763 | 18.29 | radiation | 30.0 | 10 | < th | dose independent | rect. | 12 | 22 |
| 810 | 18.30 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 812 | 18.30 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 815 | 18.31 | radiation | 10.0 | 270 | > th | dose independent | no | NA | NA |
| 939 | 18.32 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 14 |
| 971 | 18.33 | radiation | 30.0 | 10 | < th | dose dependent | no | NA | NA |
| 978 | 18.33 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 988 | 18.34 | radiation | 30.0 | 270 | < th | dose dependent | sin | 7 | NA |