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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0658300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.9 (0.0338) R2 : 0.000261
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0246 (0.0712) R2dN8 : 0.000337 R2N8 : 0.000261
σ : 0.637
deviance : 185.97
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
178.73 0.628 2.91 -0.0638 0.249 -1.55 -0.298 -3.85 0.0265 8.67 8.8 797 -- --
179.37 0.624 2.89 -0.106 0.237 -0.714 -0.368 -- 0.0388 8.78 9.4 795 -- --
179 0.623 2.91 -0.0733 0.251 -1.59 -- -4.16 0.0242 8.42 8.854 796 -- --
179.69 0.624 2.89 -0.13 0.248 -0.698 -- -- 0.029 8.34 9.292 795 -- --
182.46 0.629 2.92 -0.0837 -- -1.44 -- -3.94 0.0243 -- 8.9 796 -- --
182.03 0.633 2.9 -0.19 0.221 -- -0.238 -- 0.000472 8.44 -- -- -- --
182.19 0.632 2.9 -0.198 0.224 -- -- -- 0.000123 8.17 -- -- -- --
183.06 0.63 2.9 -0.14 -- -0.599 -- -- 0.0298 -- 9.221 795 -- --
180.11 0.625 2.89 -- 0.257 -0.755 -- -- 0.0409 8.39 9.2 795 -- --
184.95 0.635 2.9 -0.197 -- -- -- -- 0.00274 -- -- -- -- --
183.23 0.633 2.89 -- 0.222 -- -- -- 0.0222 8.24 -- -- -- --
183.51 0.631 2.9 -- -- -0.666 -- -- 0.0437 -- 8.9 796 -- --
185.97 0.637 2.9 -- -- -- -- -- 0.0246 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 169.04 wind 1 90 < th dose dependent rect. 12 1
2 169.66 humidity 90 30 > th dose independent rect. 13 3
6 169.66 humidity 90 30 > th dose dependent rect. 13 3
10 169.67 humidity 90 30 > th dose independent rect. 13 1
16 169.67 humidity 90 30 > th dose dependent rect. 13 1
38 169.92 wind 1 90 < th dose independent rect. 12 1
39 170.19 wind 1 90 < th dose dependent rect. 12 3
47 171.72 wind 1 10 < th dose dependent rect. 1 1
53 172.40 wind 1 90 < th dose independent rect. 12 3
56 172.86 humidity 90 30 < th dose independent rect. 3 1
59 173.09 humidity 90 30 < th dose dependent rect. 3 1
73 173.22 temperature 30 90 > th dose dependent rect. 10 1
80 173.70 wind 1 10 < th dose independent rect. 1 1
88 173.97 temperature 30 90 > th dose independent rect. 10 1
106 174.55 temperature 30 10 > th dose dependent rect. 12 1
117 175.19 radiation 10 10 < th dose dependent rect. 14 1
122 175.46 atmosphere 1005 10 > th dose dependent rect. 24 3
128 175.72 wind 5 90 > th dose independent rect. 9 1
151 176.25 temperature 20 10 < th dose independent rect. 2 1
154 176.29 wind 3 90 > th dose dependent rect. 9 1
155 176.33 atmosphere 1005 10 < th dose independent rect. 8 2
161 176.39 wind 1 270 < th dose dependent rect. 1 2
176 176.47 atmosphere 1005 10 > th dose dependent rect. 3 1
208 176.91 wind 9 90 > th dose dependent rect. 17 17
212 177.02 temperature 25 270 > th dose dependent rect. 10 3
214 177.03 radiation 1 270 < th dose dependent rect. 6 1
234 177.22 temperature 25 270 > th dose dependent rect. 2 11
242 177.24 temperature 25 270 > th dose dependent rect. 5 8
249 177.29 wind 9 90 > th dose independent rect. 17 17
255 177.38 wind 9 90 > th dose dependent rect. 17 9
266 177.39 humidity 90 270 > th dose dependent rect. 6 1
271 177.45 radiation 1 270 < th dose independent rect. 6 1
277 177.46 wind 9 90 > th dose dependent rect. 17 6
285 177.53 wind 9 90 > th dose independent rect. 17 9
293 177.54 wind 9 720 > th dose independent rect. 15 2
300 177.61 humidity 80 90 > th dose dependent rect. 8 1
305 177.64 wind 9 90 > th dose independent rect. 17 6
311 177.66 humidity 90 270 > th dose independent rect. 6 1
315 177.68 wind 5 90 > th dose independent rect. 21 13
320 177.71 wind 9 720 > th dose independent rect. 12 5
322 177.71 wind 9 720 > th dose dependent rect. 12 5
332 177.80 humidity 80 90 > th dose independent rect. 8 1
344 177.83 wind 5 10 < th dose dependent rect. 12 3
346 177.83 wind 1 270 < th dose dependent rect. 10 10
349 177.85 radiation 10 30 < th dose dependent rect. 10 5
351 177.85 wind 1 270 < th dose dependent rect. 10 8
365 177.90 wind 9 90 > th dose dependent sin 11 NA
375 177.95 wind 5 10 < th dose independent rect. 12 3
376 177.95 atmosphere 1005 10 > th dose independent rect. 24 3
428 178.03 radiation 10 10 < th dose independent rect. 14 1
437 178.05 wind 7 720 > th dose dependent rect. 15 2
446 178.08 temperature 20 10 < th dose independent rect. 24 3
450 178.08 wind 7 10 > th dose dependent rect. 17 17
451 178.09 wind 9 90 > th dose independent sin 12 NA
515 178.19 wind 9 720 < th dose independent rect. 13 8
516 178.19 atmosphere 1010 10 < th dose dependent rect. 10 1
527 178.23 temperature 20 10 < th dose dependent rect. 3 1
531 178.24 temperature 25 270 > th dose dependent sin 5 NA
546 178.27 wind 9 720 < th dose independent rect. 13 23
551 178.28 humidity 90 10 > th dose dependent rect. 1 3
557 178.29 humidity 60 30 > th dose dependent rect. 12 3
566 178.31 wind 5 270 > th dose independent rect. 21 1
587 178.36 wind 9 720 < th dose independent rect. 9 16
597 178.37 temperature 20 10 > th dose independent rect. 13 23
613 178.41 humidity 90 90 > th dose dependent rect. 1 2
624 178.42 wind 9 720 > th dose dependent rect. 12 1
648 178.44 wind 9 720 < th dose independent rect. 24 16
649 178.44 wind 5 720 > th dose dependent rect. 12 1
650 178.45 wind 9 720 > th dose independent rect. 12 1
654 178.45 wind 5 270 > th dose dependent rect. 21 1
669 178.46 wind 9 720 > th dose dependent rect. 9 8
677 178.46 wind 9 720 > th dose dependent rect. 22 19
721 178.54 wind 3 90 > th dose dependent rect. 21 13
722 178.55 temperature 30 10 > th dose independent rect. 11 2
728 178.55 atmosphere 1010 10 < th dose dependent rect. 8 3
732 178.56 radiation 30 90 < th dose dependent rect. 12 1
750 178.58 temperature 20 10 > th dose independent rect. 15 21
767 178.60 wind 9 720 > th dose independent rect. 9 8
775 178.60 wind 9 720 > th dose independent rect. 22 19
803 178.60 atmosphere 995 10 > th dose dependent rect. 12 16
827 178.62 atmosphere 1005 30 > th dose dependent rect. 12 17
858 178.65 wind 5 720 > th dose independent rect. 12 1
859 178.65 radiation 1 90 > th dose independent rect. 4 1
868 178.65 atmosphere 1005 90 < th dose independent rect. 7 8
870 178.65 wind 5 90 > th dose independent rect. 1 9
875 178.65 radiation 1 90 > th dose dependent rect. 4 1
887 178.66 temperature 20 90 < th dose independent rect. 2 3
891 178.66 temperature 25 10 < th dose dependent rect. 24 2
898 178.67 humidity 90 270 > th dose dependent rect. 5 18
901 178.68 temperature 25 720 > th dose independent rect. 17 6
906 178.68 temperature 25 90 < th dose dependent rect. 24 3
923 178.70 humidity 80 4320 < th dose independent rect. 6 1
983 178.76 radiation 20 90 < th dose independent rect. 12 1
987 178.76 wind 7 90 < th dose dependent rect. 12 1
1000 178.77 wind 9 720 > th dose independent rect. 12 22